RNA–Protein interactions for RNA: ENST00000461804.5

CCNL1-203, Transcript of cyclin L1, humanhuman

TSL 2 BASIC

Gene CCNL1, Length 1,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-203ENST00000461804 KRTAP4-1Q9BYQ7 146 aa10.69□□□□□ -0.7
CCNL1-203ENST00000461804 SPTSSBQ8NFR3 76 aa10.67□□□□□ -0.7
CCNL1-203ENST00000461804 HMCN2Q8NDA2 5059 aa10.67□□□□□ -0.7
CCNL1-203ENST00000461804 RBM12B-AS1Q9P1G2 102 aa10.65□□□□□ -0.7
CCNL1-203ENST00000461804 H1FX-AS1Q4G0G2 97 aa10.62□□□□□ -0.71
CCNL1-203ENST00000461804 LCA10Q71F78 164 aa10.62□□□□□ -0.71
CCNL1-203ENST00000461804 A0A1B0GU69 56 aa10.61□□□□□ -0.71
CCNL1-203ENST00000461804 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
CCNL1-203ENST00000461804 S4R3F8 94 aa10.59□□□□□ -0.71
CCNL1-203ENST00000461804 MUC17Q685J3 4493 aa10.58□□□□□ -0.72
CCNL1-203ENST00000461804 A6NED7 52 aa10.48□□□□□ -0.73
CCNL1-203ENST00000461804 SEC61GP60059 68 aa10.46□□□□□ -0.74
CCNL1-203ENST00000461804 MUC2Q02817 5179 aa10.44□□□□□ -0.74
CCNL1-203ENST00000461804 PMAIP1Q13794 54 aa10.42□□□□□ -0.74
CCNL1-203ENST00000461804 KRTAP19-2Q3LHN2 52 aa10.4□□□□□ -0.74
CCNL1-203ENST00000461804 A8MU10 97 aa10.39□□□□□ -0.75
CCNL1-203ENST00000461804 CSAG1Q6PB30 78 aa10.32□□□□□ -0.76
CCNL1-203ENST00000461804 UQCR11O14957 56 aa10.29□□□□□ -0.76
CCNL1-203ENST00000461804 CDC42SE1Q9NRR8 79 aa10.29□□□□□ -0.76
CCNL1-203ENST00000461804 UBR4Q5T4S7 5183 aa10.26□□□□□ -0.77
CCNL1-203ENST00000461804 KRTAP10-6P60371 365 aaPredicted RBP10.25□□□□□ -0.77
CCNL1-203ENST00000461804 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
CCNL1-203ENST00000461804 A0A1B0GU33 70 aa10.24□□□□□ -0.77
CCNL1-203ENST00000461804 MIR22HGQ0VDD5 57 aa10.21□□□□□ -0.78
CCNL1-203ENST00000461804 SPATA8Q6RVD6 105 aa10.2□□□□□ -0.78
CCNL1-203ENST00000461804 ADM2Q7Z4H4 148 aa10.17□□□□□ -0.78
CCNL1-203ENST00000461804 P0C880 135 aa10.17□□□□□ -0.78
CCNL1-203ENST00000461804 KTN1-AS1Q86SY8 53 aa10.16□□□□□ -0.78
CCNL1-203ENST00000461804 RNF213Q63HN8 5207 aa10.15□□□□□ -0.79
CCNL1-203ENST00000461804 H0YAA0 97 aa10.14□□□□□ -0.79
CCNL1-203ENST00000461804 LCE2CQ5TA81 110 aa10.1□□□□□ -0.79
CCNL1-203ENST00000461804 A6NN06 94 aa10.06□□□□□ -0.8
CCNL1-203ENST00000461804 FLGP20930 4061 aaPredicted RBP10.05□□□□□ -0.8
CCNL1-203ENST00000461804 KRTAP13-4Q3LI77 160 aa10.03□□□□□ -0.8
CCNL1-203ENST00000461804 FAT4Q6V0I7 4981 aa9.98□□□□□ -0.81
CCNL1-203ENST00000461804 MT1HP80294 61 aa9.87□□□□□ -0.83
CCNL1-203ENST00000461804 A0A0D9SG42 100 aa9.86□□□□□ -0.83
CCNL1-203ENST00000461804 LORP23490 312 aaPredicted RBP9.84□□□□□ -0.83
CCNL1-203ENST00000461804 M0QZ58 72 aa9.83□□□□□ -0.84
CCNL1-203ENST00000461804 M0R2T5 61 aa9.79□□□□□ -0.84
CCNL1-203ENST00000461804 R4GN34 69 aa9.78□□□□□ -0.84
CCNL1-203ENST00000461804 K7ERS5 55 aa9.66□□□□□ -0.86
CCNL1-203ENST00000461804 LINC01554Q52M75 96 aa9.66□□□□□ -0.86
CCNL1-203ENST00000461804 KRTAP12-2P59991 146 aa9.63□□□□□ -0.87
CCNL1-203ENST00000461804 KRTAP12-1P59990 96 aa9.62□□□□□ -0.87
CCNL1-203ENST00000461804 SPINT4Q6UDR6 99 aa9.59□□□□□ -0.87
CCNL1-203ENST00000461804 CRIPTQ9P021 101 aa9.56□□□□□ -0.88
CCNL1-203ENST00000461804 KRTAP9-8Q9BYQ0 159 aa9.53□□□□□ -0.88
CCNL1-203ENST00000461804 MT2AP02795 61 aa9.52□□□□□ -0.89
CCNL1-203ENST00000461804 MT1FP04733 61 aa9.49□□□□□ -0.89
CCNL1-203ENST00000461804 KRTAP10-10P60014 251 aa9.44□□□□□ -0.9
CCNL1-203ENST00000461804 PRAC1Q96KF2 57 aa9.43□□□□□ -0.9
CCNL1-203ENST00000461804 SPRR2GQ9BYE4 73 aa9.39□□□□□ -0.91
CCNL1-203ENST00000461804 KRTAP19-1Q8IUB9 90 aa9.38□□□□□ -0.91
CCNL1-203ENST00000461804 LCE2AQ5TA79 106 aaPredicted RBP9.34□□□□□ -0.91
CCNL1-203ENST00000461804 ROMO1P60602 79 aa9.33□□□□□ -0.92
CCNL1-203ENST00000461804 LCE2DQ5TA82 110 aaPredicted RBP9.19□□□□□ -0.94
CCNL1-203ENST00000461804 CAMK2N1Q7Z7J9 78 aa9.19□□□□□ -0.94
CCNL1-203ENST00000461804 KRTAP9-3Q9BYQ3 159 aa9.17□□□□□ -0.94
CCNL1-203ENST00000461804 C10orf95Q9H7T3 257 aa9.11□□□□□ -0.95
CCNL1-203ENST00000461804 KRTAP19-8Q3LI54 63 aa9.1□□□□□ -0.95
CCNL1-203ENST00000461804 PLAC4Q8WY50 150 aa9.1□□□□□ -0.95
CCNL1-203ENST00000461804 KRTAP25-1Q3LHN0 102 aa9.04□□□□□ -0.96
CCNL1-203ENST00000461804 MT1BP07438 61 aa9.01□□□□□ -0.97
CCNL1-203ENST00000461804 LCE2BO14633 110 aa8.92□□□□□ -0.98
CCNL1-203ENST00000461804 H3BS24 57 aa8.78□□□□□ -1
CCNL1-203ENST00000461804 MT1XP80297 61 aa8.76□□□□□ -1.01
CCNL1-203ENST00000461804 KRTAP10-5P60370 271 aa8.75□□□□□ -1.01
CCNL1-203ENST00000461804 TNP1P09430 55 aa8.74□□□□□ -1.01
CCNL1-203ENST00000461804 USH2AO75445 5202 aa8.68□□□□□ -1.02
CCNL1-203ENST00000461804 PRO2289Q9P1D8 64 aa8.57□□□□□ -1.04
CCNL1-203ENST00000461804 PP632Q6XCG6 107 aa8.53□□□□□ -1.04
CCNL1-203ENST00000461804 KRTAP23-1A1A580 65 aa8.46□□□□□ -1.05
CCNL1-203ENST00000461804 KRTAP10-7P60409 375 aaPredicted RBP8.44□□□□□ -1.06
CCNL1-203ENST00000461804 LCE3AQ5TA76 89 aa8.4□□□□□ -1.06
CCNL1-203ENST00000461804 FSIP2Q5CZC0 6907 aa8.35□□□□□ -1.07
CCNL1-203ENST00000461804 KRTAP10-12P60413 245 aa8.35□□□□□ -1.07
CCNL1-203ENST00000461804 SSPOA2VEC9 5147 aa8.34□□□□□ -1.07
CCNL1-203ENST00000461804 KRTAP15-1Q3LI76 137 aa8.28□□□□□ -1.08
CCNL1-203ENST00000461804 KRTAP19-6Q3LI70 58 aa8.27□□□□□ -1.09
CCNL1-203ENST00000461804 KRTAP8-1Q8IUC2 63 aa8.19□□□□□ -1.1
CCNL1-203ENST00000461804 KMT2DO14686 5537 aa8.11□□□□□ -1.11
CCNL1-203ENST00000461804 KRTAP4-8A0A0G2JLE6 195 aa8.09□□□□□ -1.11
CCNL1-203ENST00000461804 KRTAP4-8Q9BYQ9 185 aa8.09□□□□□ -1.11
CCNL1-203ENST00000461804 NDUFAF8A1L188 74 aa8.06□□□□□ -1.12
CCNL1-203ENST00000461804 KRTAP12-3P60328 96 aa8.03□□□□□ -1.12
CCNL1-203ENST00000461804 KRTAP9-2Q9BYQ4 174 aa8.01□□□□□ -1.13
CCNL1-203ENST00000461804 KRTAP19-5Q3LI72 72 aa7.96□□□□□ -1.14
CCNL1-203ENST00000461804 FCGBPQ9Y6R7 5405 aaPredicted RBP7.96□□□□□ -1.14
CCNL1-203ENST00000461804 KRTAP19-7Q3SYF9 63 aa7.82□□□□□ -1.16
CCNL1-203ENST00000461804 CRCT1Q9UGL9 99 aa7.74□□□□□ -1.17
CCNL1-203ENST00000461804 SPRR5A0A1B0GTR4 108 aa7.68□□□□□ -1.18
CCNL1-203ENST00000461804 MT1EP04732 61 aa7.65□□□□□ -1.18
CCNL1-203ENST00000461804 MACF1Q9UPN3 7388 aaKnown RBP7.61□□□□□ -1.19
CCNL1-203ENST00000461804 LUZP6Q538Z0 58 aa7.59□□□□□ -1.2
CCNL1-203ENST00000461804 MT1LQ93083 61 aa7.53□□□□□ -1.2
CCNL1-203ENST00000461804 LCE3CQ5T5A8 94 aa7.52□□□□□ -1.21
CCNL1-203ENST00000461804 SYNE2Q8WXH0 6885 aaKnown RBP7.42□□□□□ -1.22
CCNL1-203ENST00000461804 A0A0A0MQY5 61 aa7.4□□□□□ -1.22
CCNL1-203ENST00000461804 SPRR2FQ96RM1 72 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms