RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 UQCRQO14949 82 aa4.93□□□□□ -1.62
ATG4A-206ENST00000457035 TRAV22A0A0B4J277 110 aa4.92□□□□□ -1.62
ATG4A-206ENST00000457035 C4orf26Q17RF5 130 aa4.92□□□□□ -1.62
ATG4A-206ENST00000457035 H1FX-AS1Q4G0G2 97 aa4.91□□□□□ -1.62
ATG4A-206ENST00000457035 CYP4F30PQ9H0H9 118 aa4.91□□□□□ -1.62
ATG4A-206ENST00000457035 OCR1Q9BZK8 76 aa4.9□□□□□ -1.63
ATG4A-206ENST00000457035 MT-ATP8P03928 68 aa4.89□□□□□ -1.63
ATG4A-206ENST00000457035 IMUPQ9GZP8 106 aa4.89□□□□□ -1.63
ATG4A-206ENST00000457035 LOC101927531A0A1B0GV80 90 aa4.88□□□□□ -1.63
ATG4A-206ENST00000457035 H0Y9P7 68 aa4.87□□□□□ -1.63
ATG4A-206ENST00000457035 ATOX1O00244 68 aa4.86□□□□□ -1.63
ATG4A-206ENST00000457035 C1orf64Q8NEQ6 169 aa4.85□□□□□ -1.63
ATG4A-206ENST00000457035 SCGB1A1P11684 91 aa4.83□□□□□ -1.64
ATG4A-206ENST00000457035 C5orf47Q569G3 176 aa4.83□□□□□ -1.64
ATG4A-206ENST00000457035 MT2AP02795 61 aa4.82□□□□□ -1.64
ATG4A-206ENST00000457035 LINC00208Q96KT6 92 aa4.82□□□□□ -1.64
ATG4A-206ENST00000457035 MP68P56378 58 aa4.81□□□□□ -1.64
ATG4A-206ENST00000457035 MT1FP04733 61 aa4.79□□□□□ -1.64
ATG4A-206ENST00000457035 KLKP1Q107X0 134 aa4.79□□□□□ -1.64
ATG4A-206ENST00000457035 FAM236AA0A1B0GUQ0 79 aa4.78□□□□□ -1.64
ATG4A-206ENST00000457035 FAM236BA0A1B0GV22 79 aa4.78□□□□□ -1.64
ATG4A-206ENST00000457035 H3BPC8 53 aa4.78□□□□□ -1.64
ATG4A-206ENST00000457035 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
ATG4A-206ENST00000457035 S4R3F8 94 aa4.76□□□□□ -1.65
ATG4A-206ENST00000457035 TRAV7A0A075B6U4 112 aa4.75□□□□□ -1.65
ATG4A-206ENST00000457035 LCA10Q71F78 164 aa4.75□□□□□ -1.65
ATG4A-206ENST00000457035 SMIM20Q8N5G0 67 aa4.75□□□□□ -1.65
ATG4A-206ENST00000457035 USH2AO75445 5202 aa4.73□□□□□ -1.65
ATG4A-206ENST00000457035 CSAG1Q6PB30 78 aa4.72□□□□□ -1.65
ATG4A-206ENST00000457035 A8MUN3 132 aa4.7□□□□□ -1.66
ATG4A-206ENST00000457035 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
ATG4A-206ENST00000457035 SERP2Q8N6R1 65 aa4.66□□□□□ -1.66
ATG4A-206ENST00000457035 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
ATG4A-206ENST00000457035 DMAC1Q96GE9 116 aa4.64□□□□□ -1.67
ATG4A-206ENST00000457035 NDUFC1O43677 76 aa4.63□□□□□ -1.67
ATG4A-206ENST00000457035 SNURFQ9Y675 71 aa4.63□□□□□ -1.67
ATG4A-206ENST00000457035 C20orf197Q8N268 126 aa4.6□□□□□ -1.67
ATG4A-206ENST00000457035 FCGBPQ9Y6R7 5405 aaPredicted RBP4.6□□□□□ -1.67
ATG4A-206ENST00000457035 PCP4P48539 62 aa4.58□□□□□ -1.68
ATG4A-206ENST00000457035 H0YAA0 97 aa4.57□□□□□ -1.68
ATG4A-206ENST00000457035 ACYP2P14621 99 aa4.57□□□□□ -1.68
ATG4A-206ENST00000457035 COX7CP15954 63 aa4.56□□□□□ -1.68
ATG4A-206ENST00000457035 SPANXA2-OT1Q8N9U9 137 aa4.55□□□□□ -1.68
ATG4A-206ENST00000457035 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
ATG4A-206ENST00000457035 SPRR2GQ9BYE4 73 aa4.53□□□□□ -1.68
ATG4A-206ENST00000457035 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
ATG4A-206ENST00000457035 ADM2Q7Z4H4 148 aa4.51□□□□□ -1.69
ATG4A-206ENST00000457035 KRTAP19-6Q3LI70 58 aa4.5□□□□□ -1.69
ATG4A-206ENST00000457035 CRIPTQ9P021 101 aa4.5□□□□□ -1.69
ATG4A-206ENST00000457035 CYSTM1Q9H1C7 97 aa4.49□□□□□ -1.69
ATG4A-206ENST00000457035 KRTAP19-8Q3LI54 63 aa4.48□□□□□ -1.69
ATG4A-206ENST00000457035 ANAPC13Q9BS18 74 aa4.48□□□□□ -1.69
ATG4A-206ENST00000457035 H7BZZ5 65 aa4.47□□□□□ -1.69
ATG4A-206ENST00000457035 MT1BP07438 61 aa4.46□□□□□ -1.7
ATG4A-206ENST00000457035 CHKB-CPT1BH3BT56 60 aa4.45□□□□□ -1.7
ATG4A-206ENST00000457035 P0C880 135 aa4.45□□□□□ -1.7
ATG4A-206ENST00000457035 SPTSSBQ8NFR3 76 aa4.44□□□□□ -1.7
ATG4A-206ENST00000457035 Q5VV11 94 aa4.42□□□□□ -1.7
ATG4A-206ENST00000457035 CCDC179H3BU77 68 aa4.41□□□□□ -1.7
ATG4A-206ENST00000457035 COA5Q86WW8 74 aa4.4□□□□□ -1.71
ATG4A-206ENST00000457035 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
ATG4A-206ENST00000457035 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
ATG4A-206ENST00000457035 R4GN34 69 aa4.37□□□□□ -1.71
ATG4A-206ENST00000457035 M0QZ58 72 aa4.34□□□□□ -1.71
ATG4A-206ENST00000457035 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
ATG4A-206ENST00000457035 A6NN06 94 aa4.3□□□□□ -1.72
ATG4A-206ENST00000457035 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
ATG4A-206ENST00000457035 PLAC4Q8WY50 150 aa4.27□□□□□ -1.73
ATG4A-206ENST00000457035 ATP5EP56381 51 aaPredicted RBP4.26□□□□□ -1.73
ATG4A-206ENST00000457035 LINC01554Q52M75 96 aa4.26□□□□□ -1.73
ATG4A-206ENST00000457035 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
ATG4A-206ENST00000457035 NEBP20929 6669 aa4.24□□□□□ -1.73
ATG4A-206ENST00000457035 SEC61GP60059 68 aa4.23□□□□□ -1.73
ATG4A-206ENST00000457035 TMEM258P61165 79 aa4.23□□□□□ -1.73
ATG4A-206ENST00000457035 SERP1Q9Y6X1 66 aa4.23□□□□□ -1.73
ATG4A-206ENST00000457035 MT1XP80297 61 aa4.22□□□□□ -1.73
ATG4A-206ENST00000457035 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
ATG4A-206ENST00000457035 A0A1B0GU33 70 aa4.17□□□□□ -1.74
ATG4A-206ENST00000457035 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
ATG4A-206ENST00000457035 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
ATG4A-206ENST00000457035 MUC12Q9UKN1 5478 aa4.16□□□□□ -1.74
ATG4A-206ENST00000457035 A0A1B0GU69 56 aa4.15□□□□□ -1.75
ATG4A-206ENST00000457035 KMT2DO14686 5537 aa4.14□□□□□ -1.75
ATG4A-206ENST00000457035 SPATA8Q6RVD6 105 aa4.14□□□□□ -1.75
ATG4A-206ENST00000457035 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
ATG4A-206ENST00000457035 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
ATG4A-206ENST00000457035 A0A0D9SG42 100 aa4.09□□□□□ -1.75
ATG4A-206ENST00000457035 MT3P25713 68 aa4.09□□□□□ -1.75
ATG4A-206ENST00000457035 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
ATG4A-206ENST00000457035 PRR15LQ9BU68 103 aa4.07□□□□□ -1.76
ATG4A-206ENST00000457035 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
ATG4A-206ENST00000457035 SMIM26A0A096LP01 95 aa4.04□□□□□ -1.76
ATG4A-206ENST00000457035 KRTAP12-1P59990 96 aa4.04□□□□□ -1.76
ATG4A-206ENST00000457035 SPINT4Q6UDR6 99 aa4.03□□□□□ -1.76
ATG4A-206ENST00000457035 CAMK2N1Q7Z7J9 78 aa4.03□□□□□ -1.76
ATG4A-206ENST00000457035 A8MU10 97 aa4.02□□□□□ -1.77
ATG4A-206ENST00000457035 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
ATG4A-206ENST00000457035 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
ATG4A-206ENST00000457035 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
ATG4A-206ENST00000457035 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms