RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 C5orf47Q569G3 176 aa4.05□□□□□ -1.76
RFX3-209ENST00000451859 KRTAP19-6Q3LI70 58 aa4.04□□□□□ -1.76
RFX3-209ENST00000451859 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
RFX3-209ENST00000451859 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
RFX3-209ENST00000451859 FAM236AA0A1B0GUQ0 79 aa4.02□□□□□ -1.77
RFX3-209ENST00000451859 FAM236BA0A1B0GV22 79 aa4.02□□□□□ -1.77
RFX3-209ENST00000451859 PCP4L1A6NKN8 68 aa4.02□□□□□ -1.77
RFX3-209ENST00000451859 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
RFX3-209ENST00000451859 GTF2H5Q6ZYL4 71 aa4.02□□□□□ -1.77
RFX3-209ENST00000451859 ETDBQ3ZM63 59 aa4.01□□□□□ -1.77
RFX3-209ENST00000451859 C1orf64Q8NEQ6 169 aa4.01□□□□□ -1.77
RFX3-209ENST00000451859 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
RFX3-209ENST00000451859 S4R3F8 94 aa4.01□□□□□ -1.77
RFX3-209ENST00000451859 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
RFX3-209ENST00000451859 F8W1H4 67 aa3.98□□□□□ -1.77
RFX3-209ENST00000451859 LCA10Q71F78 164 aa3.98□□□□□ -1.77
RFX3-209ENST00000451859 TP53AIP1Q9HCN2 124 aa3.98□□□□□ -1.77
RFX3-209ENST00000451859 CSAG1Q6PB30 78 aa3.96□□□□□ -1.78
RFX3-209ENST00000451859 CYP4F30PQ9H0H9 118 aa3.93□□□□□ -1.78
RFX3-209ENST00000451859 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
RFX3-209ENST00000451859 TRAV22A0A0B4J277 110 aa3.92□□□□□ -1.78
RFX3-209ENST00000451859 HIST1H4AP62805 103 aaKnown RBP3.91□□□□□ -1.78
RFX3-209ENST00000451859 Q5VV11 94 aa3.91□□□□□ -1.78
RFX3-209ENST00000451859 A0A087WVE0 104 aa3.9□□□□□ -1.79
RFX3-209ENST00000451859 LOC101927531A0A1B0GV80 90 aa3.89□□□□□ -1.79
RFX3-209ENST00000451859 MT1BP07438 61 aa3.89□□□□□ -1.79
RFX3-209ENST00000451859 A6NN06 94 aa3.88□□□□□ -1.79
RFX3-209ENST00000451859 H0Y9P7 68 aa3.88□□□□□ -1.79
RFX3-209ENST00000451859 ACYP1P07311 99 aa3.88□□□□□ -1.79
RFX3-209ENST00000451859 SPRR2GQ9BYE4 73 aa3.88□□□□□ -1.79
RFX3-209ENST00000451859 KLKP1Q107X0 134 aa3.87□□□□□ -1.79
RFX3-209ENST00000451859 ATP5EP2Q5VTU8 51 aa3.87□□□□□ -1.79
RFX3-209ENST00000451859 FAM240AA0A1B0GVK7 77 aa3.86□□□□□ -1.79
RFX3-209ENST00000451859 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
RFX3-209ENST00000451859 UQCRQO14949 82 aa3.85□□□□□ -1.79
RFX3-209ENST00000451859 KRTAP19-8Q3LI54 63 aa3.85□□□□□ -1.79
RFX3-209ENST00000451859 ATOX1O00244 68 aa3.83□□□□□ -1.8
RFX3-209ENST00000451859 NDUFC1O43677 76 aa3.82□□□□□ -1.8
RFX3-209ENST00000451859 IMUPQ9GZP8 106 aa3.81□□□□□ -1.8
RFX3-209ENST00000451859 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
RFX3-209ENST00000451859 LINC00643Q86TS7 51 aa3.8□□□□□ -1.8
RFX3-209ENST00000451859 LINC00208Q96KT6 92 aa3.8□□□□□ -1.8
RFX3-209ENST00000451859 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
RFX3-209ENST00000451859 CRIPTQ9P021 101 aa3.79□□□□□ -1.8
RFX3-209ENST00000451859 A0A1B0GV90 55 aa3.77□□□□□ -1.81
RFX3-209ENST00000451859 ADM2Q7Z4H4 148 aa3.77□□□□□ -1.81
RFX3-209ENST00000451859 A8MUN3 132 aa3.76□□□□□ -1.81
RFX3-209ENST00000451859 MP68P56378 58 aa3.76□□□□□ -1.81
RFX3-209ENST00000451859 OCR1Q9BZK8 76 aa3.75□□□□□ -1.81
RFX3-209ENST00000451859 H0YAA0 97 aa3.73□□□□□ -1.81
RFX3-209ENST00000451859 NEBP20929 6669 aa3.71□□□□□ -1.82
RFX3-209ENST00000451859 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
RFX3-209ENST00000451859 KMT2DO14686 5537 aa3.7□□□□□ -1.82
RFX3-209ENST00000451859 SCGB1A1P11684 91 aa3.69□□□□□ -1.82
RFX3-209ENST00000451859 P0C880 135 aa3.68□□□□□ -1.82
RFX3-209ENST00000451859 MDN1Q9NU22 5596 aa3.68□□□□□ -1.82
RFX3-209ENST00000451859 J3QR89 54 aa3.67□□□□□ -1.82
RFX3-209ENST00000451859 R4GN34 69 aa3.67□□□□□ -1.82
RFX3-209ENST00000451859 H3BPC8 53 aa3.66□□□□□ -1.82
RFX3-209ENST00000451859 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
RFX3-209ENST00000451859 DMAC1Q96GE9 116 aa3.66□□□□□ -1.82
RFX3-209ENST00000451859 M0QZ58 72 aa3.65□□□□□ -1.83
RFX3-209ENST00000451859 MT1XP80297 61 aa3.64□□□□□ -1.83
RFX3-209ENST00000451859 LINC01554Q52M75 96 aa3.64□□□□□ -1.83
RFX3-209ENST00000451859 C20orf197Q8N268 126 aa3.64□□□□□ -1.83
RFX3-209ENST00000451859 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
RFX3-209ENST00000451859 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
RFX3-209ENST00000451859 MT3P25713 68 aa3.61□□□□□ -1.83
RFX3-209ENST00000451859 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
RFX3-209ENST00000451859 MT-ATP8P03928 68 aa3.58□□□□□ -1.84
RFX3-209ENST00000451859 KRTAP8-1Q8IUC2 63 aa3.58□□□□□ -1.84
RFX3-209ENST00000451859 TRAV7A0A075B6U4 112 aa3.56□□□□□ -1.84
RFX3-209ENST00000451859 ACYP2P14621 99 aa3.56□□□□□ -1.84
RFX3-209ENST00000451859 SPRR2EP22531 72 aa3.56□□□□□ -1.84
RFX3-209ENST00000451859 SPRR2BP35325 72 aa3.56□□□□□ -1.84
RFX3-209ENST00000451859 SPRR2AP35326 72 aa3.56□□□□□ -1.84
RFX3-209ENST00000451859 CHKB-CPT1BH3BT56 60 aa3.54□□□□□ -1.84
RFX3-209ENST00000451859 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
RFX3-209ENST00000451859 SMIM20Q8N5G0 67 aa3.53□□□□□ -1.84
RFX3-209ENST00000451859 SPTSSBQ8NFR3 76 aa3.53□□□□□ -1.84
RFX3-209ENST00000451859 SNURFQ9Y675 71 aa3.53□□□□□ -1.84
RFX3-209ENST00000451859 K7ERU9 68 aa3.52□□□□□ -1.85
RFX3-209ENST00000451859 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
RFX3-209ENST00000451859 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
RFX3-209ENST00000451859 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
RFX3-209ENST00000451859 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
RFX3-209ENST00000451859 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
RFX3-209ENST00000451859 SPRR2DP22532 72 aa3.44□□□□□ -1.86
RFX3-209ENST00000451859 KRTAP13-4Q3LI77 160 aa3.42□□□□□ -1.86
RFX3-209ENST00000451859 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
RFX3-209ENST00000451859 SPANXA2-OT1Q8N9U9 137 aa3.42□□□□□ -1.86
RFX3-209ENST00000451859 SERP2Q8N6R1 65 aa3.41□□□□□ -1.86
RFX3-209ENST00000451859 CAMK2N1Q7Z7J9 78 aa3.39□□□□□ -1.87
RFX3-209ENST00000451859 KRTAP2-1Q9BYU5 128 aa3.39□□□□□ -1.87
RFX3-209ENST00000451859 COA5Q86WW8 74 aa3.37□□□□□ -1.87
RFX3-209ENST00000451859 A0A0D9SG42 100 aa3.35□□□□□ -1.87
RFX3-209ENST00000451859 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
RFX3-209ENST00000451859 SEC61GP60059 68 aa3.32□□□□□ -1.88
RFX3-209ENST00000451859 SERP1Q9Y6X1 66 aa3.32□□□□□ -1.88
RFX3-209ENST00000451859 SPATA8Q6RVD6 105 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms