RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 S4R3F8 94 aa4.89□□□□□ -1.63
RFC4-210ENST00000449502 V9GYY9 64 aa4.86□□□□□ -1.63
RFC4-210ENST00000449502 KRTAP3-3Q9BYR6 98 aa4.85□□□□□ -1.63
RFC4-210ENST00000449502 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
RFC4-210ENST00000449502 SEC61GP60059 68 aa4.82□□□□□ -1.64
RFC4-210ENST00000449502 LCA10Q71F78 164 aa4.82□□□□□ -1.64
RFC4-210ENST00000449502 PRR15LQ9BU68 103 aa4.8□□□□□ -1.64
RFC4-210ENST00000449502 Q1T7F1 81 aa4.79□□□□□ -1.64
RFC4-210ENST00000449502 CSAG1Q6PB30 78 aa4.79□□□□□ -1.64
RFC4-210ENST00000449502 LINC01558Q9Y6Z2 57 aa4.78□□□□□ -1.64
RFC4-210ENST00000449502 A0A1B0GU69 56 aa4.77□□□□□ -1.65
RFC4-210ENST00000449502 PSPHP1O15172 72 aa4.74□□□□□ -1.65
RFC4-210ENST00000449502 RNF213Q63HN8 5207 aa4.73□□□□□ -1.65
RFC4-210ENST00000449502 UBR4Q5T4S7 5183 aa4.72□□□□□ -1.65
RFC4-210ENST00000449502 KRTAP19-2Q3LHN2 52 aa4.71□□□□□ -1.66
RFC4-210ENST00000449502 M0R2T5 61 aa4.69□□□□□ -1.66
RFC4-210ENST00000449502 ADM2Q7Z4H4 148 aa4.66□□□□□ -1.66
RFC4-210ENST00000449502 MUC2Q02817 5179 aa4.66□□□□□ -1.66
RFC4-210ENST00000449502 LCE2CQ5TA81 110 aa4.65□□□□□ -1.67
RFC4-210ENST00000449502 Q5VV11 94 aa4.65□□□□□ -1.67
RFC4-210ENST00000449502 A6NED7 52 aa4.63□□□□□ -1.67
RFC4-210ENST00000449502 H0YAA0 97 aa4.63□□□□□ -1.67
RFC4-210ENST00000449502 A0A1B0GU33 70 aa4.62□□□□□ -1.67
RFC4-210ENST00000449502 UQCR11O14957 56 aa4.61□□□□□ -1.67
RFC4-210ENST00000449502 MT1HP80294 61 aa4.61□□□□□ -1.67
RFC4-210ENST00000449502 P0C880 135 aa4.56□□□□□ -1.68
RFC4-210ENST00000449502 KRTAP10-6P60371 365 aaPredicted RBP4.56□□□□□ -1.68
RFC4-210ENST00000449502 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
RFC4-210ENST00000449502 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
RFC4-210ENST00000449502 FAT4Q6V0I7 4981 aa4.54□□□□□ -1.68
RFC4-210ENST00000449502 FLGP20930 4061 aaPredicted RBP4.53□□□□□ -1.68
RFC4-210ENST00000449502 M0QZ58 72 aa4.51□□□□□ -1.69
RFC4-210ENST00000449502 R4GN34 69 aa4.51□□□□□ -1.69
RFC4-210ENST00000449502 SPATA8Q6RVD6 105 aa4.5□□□□□ -1.69
RFC4-210ENST00000449502 CDC42SE1Q9NRR8 79 aa4.5□□□□□ -1.69
RFC4-210ENST00000449502 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
RFC4-210ENST00000449502 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
RFC4-210ENST00000449502 CRIPTQ9P021 101 aa4.49□□□□□ -1.69
RFC4-210ENST00000449502 KRTAP10-10P60014 251 aa4.46□□□□□ -1.7
RFC4-210ENST00000449502 A0A0D9SG42 100 aa4.45□□□□□ -1.7
RFC4-210ENST00000449502 K7ERS5 55 aa4.45□□□□□ -1.7
RFC4-210ENST00000449502 LINC01554Q52M75 96 aa4.44□□□□□ -1.7
RFC4-210ENST00000449502 A8MU10 97 aa4.42□□□□□ -1.7
RFC4-210ENST00000449502 KRTAP13-4Q3LI77 160 aa4.42□□□□□ -1.7
RFC4-210ENST00000449502 MT2AP02795 61 aa4.41□□□□□ -1.7
RFC4-210ENST00000449502 LORP23490 312 aaPredicted RBP4.41□□□□□ -1.7
RFC4-210ENST00000449502 LCE2AQ5TA79 106 aaPredicted RBP4.4□□□□□ -1.71
RFC4-210ENST00000449502 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
RFC4-210ENST00000449502 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
RFC4-210ENST00000449502 MT1FP04733 61 aa4.38□□□□□ -1.71
RFC4-210ENST00000449502 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
RFC4-210ENST00000449502 SPRR2GQ9BYE4 73 aa4.31□□□□□ -1.72
RFC4-210ENST00000449502 A6NN06 94 aa4.3□□□□□ -1.72
RFC4-210ENST00000449502 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
RFC4-210ENST00000449502 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
RFC4-210ENST00000449502 PLAC4Q8WY50 150 aa4.29□□□□□ -1.72
RFC4-210ENST00000449502 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
RFC4-210ENST00000449502 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
RFC4-210ENST00000449502 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
RFC4-210ENST00000449502 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
RFC4-210ENST00000449502 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
RFC4-210ENST00000449502 LCE2BO14633 110 aa4.17□□□□□ -1.74
RFC4-210ENST00000449502 ROMO1P60602 79 aa4.17□□□□□ -1.74
RFC4-210ENST00000449502 MT1BP07438 61 aa4.13□□□□□ -1.75
RFC4-210ENST00000449502 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
RFC4-210ENST00000449502 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.75
RFC4-210ENST00000449502 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
RFC4-210ENST00000449502 H3BS24 57 aa4.04□□□□□ -1.76
RFC4-210ENST00000449502 TNP1P09430 55 aa4.03□□□□□ -1.76
RFC4-210ENST00000449502 KRTAP25-1Q3LHN0 102 aa4.01□□□□□ -1.77
RFC4-210ENST00000449502 USH2AO75445 5202 aa4□□□□□ -1.77
RFC4-210ENST00000449502 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
RFC4-210ENST00000449502 MT1XP80297 61 aa3.99□□□□□ -1.77
RFC4-210ENST00000449502 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
RFC4-210ENST00000449502 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
RFC4-210ENST00000449502 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
RFC4-210ENST00000449502 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
RFC4-210ENST00000449502 KRTAP19-6Q3LI70 58 aa3.92□□□□□ -1.78
RFC4-210ENST00000449502 KRTAP9-2Q9BYQ4 174 aa3.92□□□□□ -1.78
RFC4-210ENST00000449502 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
RFC4-210ENST00000449502 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
RFC4-210ENST00000449502 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
RFC4-210ENST00000449502 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
RFC4-210ENST00000449502 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
RFC4-210ENST00000449502 FSIP2Q5CZC0 6907 aa3.84□□□□□ -1.79
RFC4-210ENST00000449502 SSPOA2VEC9 5147 aa3.84□□□□□ -1.79
RFC4-210ENST00000449502 CRCT1Q9UGL9 99 aa3.8□□□□□ -1.8
RFC4-210ENST00000449502 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
RFC4-210ENST00000449502 KRTAP4-8A0A0G2JLE6 195 aa3.71□□□□□ -1.82
RFC4-210ENST00000449502 FCGBPQ9Y6R7 5405 aaPredicted RBP3.7□□□□□ -1.82
RFC4-210ENST00000449502 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
RFC4-210ENST00000449502 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
RFC4-210ENST00000449502 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
RFC4-210ENST00000449502 KRTAP12-3P60328 96 aa3.67□□□□□ -1.82
RFC4-210ENST00000449502 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
RFC4-210ENST00000449502 KRTAP19-5Q3LI72 72 aa3.63□□□□□ -1.83
RFC4-210ENST00000449502 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
RFC4-210ENST00000449502 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
RFC4-210ENST00000449502 KMT2DO14686 5537 aa3.58□□□□□ -1.84
RFC4-210ENST00000449502 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms