RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 IMUPQ9GZP8 106 aa10.75□□□□□ -0.69
PMS1-214ENST00000446877 KRTAP2-3P0C7H8 128 aa10.74□□□□□ -0.69
PMS1-214ENST00000446877 KLKP1Q107X0 134 aa10.74□□□□□ -0.69
PMS1-214ENST00000446877 LCA10Q71F78 164 aa10.74□□□□□ -0.69
PMS1-214ENST00000446877 KRTAP2-4Q9BYR9 128 aa10.74□□□□□ -0.69
PMS1-214ENST00000446877 ATP5EP2Q5VTU8 51 aa10.72□□□□□ -0.69
PMS1-214ENST00000446877 C1orf64Q8NEQ6 169 aa10.71□□□□□ -0.69
PMS1-214ENST00000446877 LINC00643Q86TS7 51 aa10.69□□□□□ -0.7
PMS1-214ENST00000446877 CRIPTQ9P021 101 aa10.59□□□□□ -0.71
PMS1-214ENST00000446877 HIST1H4AP62805 103 aaKnown RBP10.57□□□□□ -0.72
PMS1-214ENST00000446877 K7ERU9 68 aa10.54□□□□□ -0.72
PMS1-214ENST00000446877 TP53AIP1Q9HCN2 124 aa10.53□□□□□ -0.72
PMS1-214ENST00000446877 SPRR2FQ96RM1 72 aa10.52□□□□□ -0.73
PMS1-214ENST00000446877 SPRR2EP22531 72 aa10.51□□□□□ -0.73
PMS1-214ENST00000446877 SPRR2BP35325 72 aa10.51□□□□□ -0.73
PMS1-214ENST00000446877 SPRR2AP35326 72 aa10.51□□□□□ -0.73
PMS1-214ENST00000446877 KRTAP3-3Q9BYR6 98 aa10.48□□□□□ -0.73
PMS1-214ENST00000446877 A0A087WVE0 104 aa10.45□□□□□ -0.74
PMS1-214ENST00000446877 PRO2289Q9P1D8 64 aa10.37□□□□□ -0.75
PMS1-214ENST00000446877 KRTAP2-2Q9BYT5 123 aa10.36□□□□□ -0.75
PMS1-214ENST00000446877 KRTAP2-1Q9BYU5 128 aa10.36□□□□□ -0.75
PMS1-214ENST00000446877 UQCRQO14949 82 aa10.34□□□□□ -0.75
PMS1-214ENST00000446877 TRAV22A0A0B4J277 110 aa10.31□□□□□ -0.76
PMS1-214ENST00000446877 KRTAP8-1Q8IUC2 63 aa10.31□□□□□ -0.76
PMS1-214ENST00000446877 MT-ATP8P03928 68 aa10.3□□□□□ -0.76
PMS1-214ENST00000446877 CYP4F30PQ9H0H9 118 aa10.27□□□□□ -0.77
PMS1-214ENST00000446877 LCE1AQ5T7P2 110 aa10.26□□□□□ -0.77
PMS1-214ENST00000446877 OCR1Q9BZK8 76 aa10.25□□□□□ -0.77
PMS1-214ENST00000446877 ATOX1O00244 68 aa10.23□□□□□ -0.77
PMS1-214ENST00000446877 LOC101927531A0A1B0GV80 90 aa10.22□□□□□ -0.77
PMS1-214ENST00000446877 H0Y9P7 68 aa10.22□□□□□ -0.77
PMS1-214ENST00000446877 H0YAA0 97 aa10.22□□□□□ -0.77
PMS1-214ENST00000446877 SCGB1A1P11684 91 aa10.22□□□□□ -0.77
PMS1-214ENST00000446877 MT1XP80297 61 aa10.22□□□□□ -0.77
PMS1-214ENST00000446877 A8MUN3 132 aa10.21□□□□□ -0.77
PMS1-214ENST00000446877 NDUFC1O43677 76 aa10.21□□□□□ -0.77
PMS1-214ENST00000446877 PLAC4Q8WY50 150 aa10.19□□□□□ -0.78
PMS1-214ENST00000446877 SPRR2DP22532 72 aa10.17□□□□□ -0.78
PMS1-214ENST00000446877 MP68P56378 58 aa10.13□□□□□ -0.79
PMS1-214ENST00000446877 ADM2Q7Z4H4 148 aa10.13□□□□□ -0.79
PMS1-214ENST00000446877 KRTAP12-2P59991 146 aa10.1□□□□□ -0.79
PMS1-214ENST00000446877 LINC00208Q96KT6 92 aa10.1□□□□□ -0.79
PMS1-214ENST00000446877 H3BPC8 53 aa10.08□□□□□ -0.8
PMS1-214ENST00000446877 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
PMS1-214ENST00000446877 TRAV7A0A075B6U4 112 aa10.02□□□□□ -0.81
PMS1-214ENST00000446877 KRTAP4-8A0A0G2JLE6 195 aa9.98□□□□□ -0.81
PMS1-214ENST00000446877 KRTAP4-8Q9BYQ9 185 aa9.98□□□□□ -0.81
PMS1-214ENST00000446877 R4GN34 69 aa9.94□□□□□ -0.82
PMS1-214ENST00000446877 LCE3BQ5TA77 95 aa9.93□□□□□ -0.82
PMS1-214ENST00000446877 GPR98Q8WXG9 6306 aa9.91□□□□□ -0.82
PMS1-214ENST00000446877 SERP2Q8N6R1 65 aa9.85□□□□□ -0.83
PMS1-214ENST00000446877 C20orf197Q8N268 126 aa9.84□□□□□ -0.83
PMS1-214ENST00000446877 M0QZ58 72 aa9.82□□□□□ -0.84
PMS1-214ENST00000446877 P0C880 135 aa9.78□□□□□ -0.84
PMS1-214ENST00000446877 LINC01554Q52M75 96 aa9.75□□□□□ -0.85
PMS1-214ENST00000446877 KRTAP10-7P60409 375 aaPredicted RBP9.74□□□□□ -0.85
PMS1-214ENST00000446877 SNURFQ9Y675 71 aa9.73□□□□□ -0.85
PMS1-214ENST00000446877 DMAC1Q96GE9 116 aa9.72□□□□□ -0.85
PMS1-214ENST00000446877 KRTAP10-12P60413 245 aa9.7□□□□□ -0.86
PMS1-214ENST00000446877 COX7CP15954 63 aa9.68□□□□□ -0.86
PMS1-214ENST00000446877 DSTQ03001 7570 aaKnown RBP9.62□□□□□ -0.87
PMS1-214ENST00000446877 ACYP2P14621 99 aa9.6□□□□□ -0.87
PMS1-214ENST00000446877 SPANXA2-OT1Q8N9U9 137 aa9.59□□□□□ -0.87
PMS1-214ENST00000446877 ANAPC13Q9BS18 74 aa9.56□□□□□ -0.88
PMS1-214ENST00000446877 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
PMS1-214ENST00000446877 H7BZZ5 65 aa9.41□□□□□ -0.9
PMS1-214ENST00000446877 SPTSSBQ8NFR3 76 aa9.4□□□□□ -0.9
PMS1-214ENST00000446877 KRTAP4-9Q9BYQ8 210 aa9.4□□□□□ -0.9
PMS1-214ENST00000446877 CHKB-CPT1BH3BT56 60 aa9.39□□□□□ -0.91
PMS1-214ENST00000446877 CYSTM1Q9H1C7 97 aa9.39□□□□□ -0.91
PMS1-214ENST00000446877 CCDC179H3BU77 68 aa9.33□□□□□ -0.92
PMS1-214ENST00000446877 COA5Q86WW8 74 aa9.26□□□□□ -0.93
PMS1-214ENST00000446877 LCE5AQ5TCM9 118 aa9.25□□□□□ -0.93
PMS1-214ENST00000446877 KRTAP19-3Q7Z4W3 81 aa9.16□□□□□ -0.94
PMS1-214ENST00000446877 KRTAP19-7Q3SYF9 63 aa9.13□□□□□ -0.95
PMS1-214ENST00000446877 ATP5EP56381 51 aaPredicted RBP9.12□□□□□ -0.95
PMS1-214ENST00000446877 MT1EP04732 61 aa9.1□□□□□ -0.95
PMS1-214ENST00000446877 LCE1DQ5T752 114 aa9.09□□□□□ -0.95
PMS1-214ENST00000446877 CAMK2N1Q7Z7J9 78 aa9.08□□□□□ -0.96
PMS1-214ENST00000446877 HMCN1Q96RW7 5635 aa9.07□□□□□ -0.96
PMS1-214ENST00000446877 TMEM258P61165 79 aa9.03□□□□□ -0.96
PMS1-214ENST00000446877 AHNAK2Q8IVF2 5795 aa8.97□□□□□ -0.97
PMS1-214ENST00000446877 MT4P47944 62 aa8.95□□□□□ -0.98
PMS1-214ENST00000446877 SEC61GP60059 68 aa8.95□□□□□ -0.98
PMS1-214ENST00000446877 LCE4AQ5TA78 99 aa8.95□□□□□ -0.98
PMS1-214ENST00000446877 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
PMS1-214ENST00000446877 MT1GP13640 62 aa8.9□□□□□ -0.98
PMS1-214ENST00000446877 KRTAP13-4Q3LI77 160 aa8.86□□□□□ -0.99
PMS1-214ENST00000446877 PP632Q6XCG6 107 aa8.86□□□□□ -0.99
PMS1-214ENST00000446877 A0A0D9SG42 100 aa8.79□□□□□ -1
PMS1-214ENST00000446877 A0A1B0GU69 56 aa8.79□□□□□ -1
PMS1-214ENST00000446877 KRTAP19-5Q3LI72 72 aa8.79□□□□□ -1
PMS1-214ENST00000446877 A0A1B0GU33 70 aa8.75□□□□□ -1.01
PMS1-214ENST00000446877 PCP4P48539 62 aa8.75□□□□□ -1.01
PMS1-214ENST00000446877 KRTAP5-10Q6L8G5 202 aa8.72□□□□□ -1.01
PMS1-214ENST00000446877 MT1MQ8N339 61 aa8.71□□□□□ -1.02
PMS1-214ENST00000446877 LINC01558Q9Y6Z2 57 aa8.7□□□□□ -1.02
PMS1-214ENST00000446877 PRR15LQ9BU68 103 aa8.67□□□□□ -1.02
PMS1-214ENST00000446877 SPATA8Q6RVD6 105 aa8.63□□□□□ -1.03
PMS1-214ENST00000446877 KRTAP5-4Q6L8H1 288 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms