RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

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Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 IMUPQ9GZP8 106 aa9.21□□□□□ -0.94
VSX1-206ENST00000444511 NDUFC1O43677 76 aa9.14□□□□□ -0.95
VSX1-206ENST00000444511 ACYP1P07311 99 aa9.12□□□□□ -0.95
VSX1-206ENST00000444511 UQCRQO14949 82 aa9.11□□□□□ -0.95
VSX1-206ENST00000444511 H0Y9P7 68 aa9.1□□□□□ -0.95
VSX1-206ENST00000444511 ATOX1O00244 68 aa9.1□□□□□ -0.95
VSX1-206ENST00000444511 KRTAP5-9P26371 169 aa9.1□□□□□ -0.95
VSX1-206ENST00000444511 HIST1H4AP62805 103 aaKnown RBP9.1□□□□□ -0.95
VSX1-206ENST00000444511 ATP5EP2Q5VTU8 51 aa9.09□□□□□ -0.95
VSX1-206ENST00000444511 H0YAA0 97 aa9.08□□□□□ -0.96
VSX1-206ENST00000444511 PCP4L1A6NKN8 68 aa9.06□□□□□ -0.96
VSX1-206ENST00000444511 KRTAP20-1Q3LI63 56 aa9.05□□□□□ -0.96
VSX1-206ENST00000444511 FAM240AA0A1B0GVK7 77 aa9.03□□□□□ -0.96
VSX1-206ENST00000444511 KMT2DO14686 5537 aa9.03□□□□□ -0.96
VSX1-206ENST00000444511 A8MUN3 132 aa9.01□□□□□ -0.97
VSX1-206ENST00000444511 ADM2Q7Z4H4 148 aa9□□□□□ -0.97
VSX1-206ENST00000444511 MDN1Q9NU22 5596 aa9□□□□□ -0.97
VSX1-206ENST00000444511 LINC00208Q96KT6 92 aa8.93□□□□□ -0.98
VSX1-206ENST00000444511 PRO2289Q9P1D8 64 aa8.92□□□□□ -0.98
VSX1-206ENST00000444511 LINC00643Q86TS7 51 aa8.88□□□□□ -0.99
VSX1-206ENST00000444511 MP68P56378 58 aa8.86□□□□□ -0.99
VSX1-206ENST00000444511 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
VSX1-206ENST00000444511 MT1XP80297 61 aa8.84□□□□□ -0.99
VSX1-206ENST00000444511 SPRR2FQ96RM1 72 aa8.82□□□□□ -1
VSX1-206ENST00000444511 R4GN34 69 aa8.81□□□□□ -1
VSX1-206ENST00000444511 OCR1Q9BZK8 76 aa8.8□□□□□ -1
VSX1-206ENST00000444511 C20orf197Q8N268 126 aa8.77□□□□□ -1.01
VSX1-206ENST00000444511 KRTAP2-3P0C7H8 128 aa8.75□□□□□ -1.01
VSX1-206ENST00000444511 P0C880 135 aa8.75□□□□□ -1.01
VSX1-206ENST00000444511 KRTAP2-4Q9BYR9 128 aa8.75□□□□□ -1.01
VSX1-206ENST00000444511 SPRR2EP22531 72 aa8.74□□□□□ -1.01
VSX1-206ENST00000444511 SPRR2BP35325 72 aa8.74□□□□□ -1.01
VSX1-206ENST00000444511 SPRR2AP35326 72 aa8.74□□□□□ -1.01
VSX1-206ENST00000444511 M0QZ58 72 aa8.72□□□□□ -1.01
VSX1-206ENST00000444511 KRTAP8-1Q8IUC2 63 aa8.72□□□□□ -1.01
VSX1-206ENST00000444511 H3BPC8 53 aa8.68□□□□□ -1.02
VSX1-206ENST00000444511 KRTAP12-2P59991 146 aa8.67□□□□□ -1.02
VSX1-206ENST00000444511 DMAC1Q96GE9 116 aa8.67□□□□□ -1.02
VSX1-206ENST00000444511 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
VSX1-206ENST00000444511 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
VSX1-206ENST00000444511 SCGB1A1P11684 91 aa8.58□□□□□ -1.04
VSX1-206ENST00000444511 LCE1AQ5T7P2 110 aa8.57□□□□□ -1.04
VSX1-206ENST00000444511 KRTAP4-8A0A0G2JLE6 195 aa8.53□□□□□ -1.04
VSX1-206ENST00000444511 KRTAP4-8Q9BYQ9 185 aa8.53□□□□□ -1.04
VSX1-206ENST00000444511 A0A1B0GV90 55 aa8.52□□□□□ -1.05
VSX1-206ENST00000444511 TRAV7A0A075B6U4 112 aa8.49□□□□□ -1.05
VSX1-206ENST00000444511 J3QR89 54 aa8.49□□□□□ -1.05
VSX1-206ENST00000444511 SPRR2DP22532 72 aa8.46□□□□□ -1.06
VSX1-206ENST00000444511 KRTAP2-2Q9BYT5 123 aa8.46□□□□□ -1.06
VSX1-206ENST00000444511 KRTAP2-1Q9BYU5 128 aa8.46□□□□□ -1.06
VSX1-206ENST00000444511 ACYP2P14621 99 aa8.43□□□□□ -1.06
VSX1-206ENST00000444511 KRTAP10-7P60409 375 aaPredicted RBP8.43□□□□□ -1.06
VSX1-206ENST00000444511 MT-ATP8P03928 68 aa8.42□□□□□ -1.06
VSX1-206ENST00000444511 SPTSSBQ8NFR3 76 aa8.4□□□□□ -1.06
VSX1-206ENST00000444511 KRTAP10-12P60413 245 aa8.39□□□□□ -1.07
VSX1-206ENST00000444511 CHKB-CPT1BH3BT56 60 aa8.31□□□□□ -1.08
VSX1-206ENST00000444511 SMIM20Q8N5G0 67 aa8.27□□□□□ -1.09
VSX1-206ENST00000444511 LCE3BQ5TA77 95 aa8.24□□□□□ -1.09
VSX1-206ENST00000444511 SNURFQ9Y675 71 aa8.13□□□□□ -1.11
VSX1-206ENST00000444511 KRTAP13-4Q3LI77 160 aa8.08□□□□□ -1.12
VSX1-206ENST00000444511 CAMK2N1Q7Z7J9 78 aa8.08□□□□□ -1.12
VSX1-206ENST00000444511 K7ERU9 68 aa8.05□□□□□ -1.12
VSX1-206ENST00000444511 SPANXA2-OT1Q8N9U9 137 aa8.05□□□□□ -1.12
VSX1-206ENST00000444511 KRTAP19-7Q3SYF9 63 aa7.9□□□□□ -1.14
VSX1-206ENST00000444511 SERP2Q8N6R1 65 aa7.89□□□□□ -1.15
VSX1-206ENST00000444511 LCE5AQ5TCM9 118 aa7.88□□□□□ -1.15
VSX1-206ENST00000444511 A0A0D9SG42 100 aa7.85□□□□□ -1.15
VSX1-206ENST00000444511 MT1EP04732 61 aa7.85□□□□□ -1.15
VSX1-206ENST00000444511 COA5Q86WW8 74 aa7.85□□□□□ -1.15
VSX1-206ENST00000444511 SEC61GP60059 68 aa7.84□□□□□ -1.15
VSX1-206ENST00000444511 KRTAP19-3Q7Z4W3 81 aa7.83□□□□□ -1.16
VSX1-206ENST00000444511 DSTQ03001 7570 aaKnown RBP7.82□□□□□ -1.16
VSX1-206ENST00000444511 SERP1Q9Y6X1 66 aa7.82□□□□□ -1.16
VSX1-206ENST00000444511 SPATA8Q6RVD6 105 aa7.76□□□□□ -1.17
VSX1-206ENST00000444511 SPINT4Q6UDR6 99 aa7.75□□□□□ -1.17
VSX1-206ENST00000444511 GPR98Q8WXG9 6306 aa7.74□□□□□ -1.17
VSX1-206ENST00000444511 KRTAP4-9Q9BYQ8 210 aa7.72□□□□□ -1.17
VSX1-206ENST00000444511 LOC100996750A0A140TA64 210 aa7.7□□□□□ -1.18
VSX1-206ENST00000444511 A0A1B0GU33 70 aa7.7□□□□□ -1.18
VSX1-206ENST00000444511 KRTAP4-6Q9BYQ5 205 aa7.7□□□□□ -1.18
VSX1-206ENST00000444511 CYSTM1Q9H1C7 97 aa7.68□□□□□ -1.18
VSX1-206ENST00000444511 KRTAP19-5Q3LI72 72 aa7.66□□□□□ -1.18
VSX1-206ENST00000444511 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
VSX1-206ENST00000444511 MT1GP13640 62 aa7.63□□□□□ -1.19
VSX1-206ENST00000444511 PP632Q6XCG6 107 aa7.59□□□□□ -1.19
VSX1-206ENST00000444511 COX7CP15954 63 aa7.57□□□□□ -1.2
VSX1-206ENST00000444511 H7BZZ5 65 aa7.51□□□□□ -1.21
VSX1-206ENST00000444511 LCE1DQ5T752 114 aa7.51□□□□□ -1.21
VSX1-206ENST00000444511 SMIM26A0A096LP01 95 aa7.5□□□□□ -1.21
VSX1-206ENST00000444511 MT1MQ8N339 61 aa7.49□□□□□ -1.21
VSX1-206ENST00000444511 A0A1B0GU69 56 aa7.48□□□□□ -1.21
VSX1-206ENST00000444511 MT1LQ93083 61 aa7.47□□□□□ -1.21
VSX1-206ENST00000444511 LCE4AQ5TA78 99 aa7.45□□□□□ -1.22
VSX1-206ENST00000444511 A8MU10 97 aa7.42□□□□□ -1.22
VSX1-206ENST00000444511 MT4P47944 62 aa7.41□□□□□ -1.22
VSX1-206ENST00000444511 LCE3AQ5TA76 89 aa7.39□□□□□ -1.23
VSX1-206ENST00000444511 C10orf95Q9H7T3 257 aa7.39□□□□□ -1.23
VSX1-206ENST00000444511 HMCN1Q96RW7 5635 aa7.38□□□□□ -1.23
VSX1-206ENST00000444511 TNP1P09430 55 aa7.37□□□□□ -1.23
VSX1-206ENST00000444511 KRTAP4-3Q9BYR4 195 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms