RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 LOC105371267A0A1B0GV96 52 aa6.1□□□□□ -1.43
HMGN1-208ENST00000443046 HCG22E2RYF7 251 aa6.1□□□□□ -1.43
HMGN1-208ENST00000443046 SMIM6P0DI80 62 aa6.1□□□□□ -1.43
HMGN1-208ENST00000443046 ATXN8Q156A1 80 aa6.1□□□□□ -1.43
HMGN1-208ENST00000443046 SPRR2DP22532 72 aa6.09□□□□□ -1.43
HMGN1-208ENST00000443046 CXCL6P80162 114 aa6.09□□□□□ -1.43
HMGN1-208ENST00000443046 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
HMGN1-208ENST00000443046 KRTAP5-3Q6L8H2 238 aa6.07□□□□□ -1.44
HMGN1-208ENST00000443046 CASC2Q6XLA1 102 aa6.07□□□□□ -1.44
HMGN1-208ENST00000443046 MT1XP80297 61 aa6.06□□□□□ -1.44
HMGN1-208ENST00000443046 BPY2O14599 106 aa6.05□□□□□ -1.44
HMGN1-208ENST00000443046 PRO2289Q9P1D8 64 aa6.03□□□□□ -1.44
HMGN1-208ENST00000443046 Q8N9L7 120 aa6.02□□□□□ -1.45
HMGN1-208ENST00000443046 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
HMGN1-208ENST00000443046 KRTAP4-11Q9BYQ6 195 aa5.99□□□□□ -1.45
HMGN1-208ENST00000443046 NAA38Q9BRA0 125 aaKnown RBP5.98□□□□□ -1.45
HMGN1-208ENST00000443046 TSTD3H0UI37 97 aa5.97□□□□□ -1.45
HMGN1-208ENST00000443046 M0R143 59 aa5.97□□□□□ -1.45
HMGN1-208ENST00000443046 A0A087WVE0 104 aa5.95□□□□□ -1.46
HMGN1-208ENST00000443046 H0YAA0 97 aa5.92□□□□□ -1.46
HMGN1-208ENST00000443046 BATFQ16520 125 aa5.91□□□□□ -1.46
HMGN1-208ENST00000443046 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
HMGN1-208ENST00000443046 A8MUN3 132 aa5.87□□□□□ -1.47
HMGN1-208ENST00000443046 PLAC4Q8WY50 150 aa5.86□□□□□ -1.47
HMGN1-208ENST00000443046 TAX1BP3O14907 124 aa5.85□□□□□ -1.47
HMGN1-208ENST00000443046 H3BT86 120 aa5.84□□□□□ -1.47
HMGN1-208ENST00000443046 TP53AIP1Q9HCN2 124 aa5.84□□□□□ -1.47
HMGN1-208ENST00000443046 C9orf118A6NHY6 69 aa5.83□□□□□ -1.48
HMGN1-208ENST00000443046 CYP4F30PQ9H0H9 118 aa5.83□□□□□ -1.48
HMGN1-208ENST00000443046 A0A1W2PPM0 123 aa5.8□□□□□ -1.48
HMGN1-208ENST00000443046 ADM2Q7Z4H4 148 aa5.79□□□□□ -1.48
HMGN1-208ENST00000443046 NDUFC1O43677 76 aa5.78□□□□□ -1.48
HMGN1-208ENST00000443046 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
HMGN1-208ENST00000443046 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
HMGN1-208ENST00000443046 H3BS24 57 aa5.74□□□□□ -1.49
HMGN1-208ENST00000443046 PCP4L1A6NKN8 68 aa5.73□□□□□ -1.49
HMGN1-208ENST00000443046 COL5A1-AS1Q5SY13 56 aa5.73□□□□□ -1.49
HMGN1-208ENST00000443046 UBL5Q9BZL1 73 aa5.72□□□□□ -1.49
HMGN1-208ENST00000443046 SPCS1Q9Y6A9 102 aa5.72□□□□□ -1.49
HMGN1-208ENST00000443046 K7EP34 96 aa5.69□□□□□ -1.5
HMGN1-208ENST00000443046 LOC101927531A0A1B0GV80 90 aa5.68□□□□□ -1.5
HMGN1-208ENST00000443046 R4GN34 69 aa5.68□□□□□ -1.5
HMGN1-208ENST00000443046 PRO0461Q9UI25 63 aa5.67□□□□□ -1.5
HMGN1-208ENST00000443046 TRAV22A0A0B4J277 110 aa5.64□□□□□ -1.51
HMGN1-208ENST00000443046 P0C880 135 aa5.63□□□□□ -1.51
HMGN1-208ENST00000443046 M0QZ58 72 aa5.61□□□□□ -1.51
HMGN1-208ENST00000443046 ACYP1P07311 99 aa5.6□□□□□ -1.51
HMGN1-208ENST00000443046 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
HMGN1-208ENST00000443046 HMCN1Q96RW7 5635 aa5.58□□□□□ -1.52
HMGN1-208ENST00000443046 GTF2H5Q6ZYL4 71 aa5.57□□□□□ -1.52
HMGN1-208ENST00000443046 C20orf197Q8N268 126 aa5.56□□□□□ -1.52
HMGN1-208ENST00000443046 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
HMGN1-208ENST00000443046 AHNAK2Q8IVF2 5795 aa5.54□□□□□ -1.52
HMGN1-208ENST00000443046 F8W1H4 67 aa5.53□□□□□ -1.52
HMGN1-208ENST00000443046 ETDBQ3ZM63 59 aa5.52□□□□□ -1.53
HMGN1-208ENST00000443046 LINC01554Q52M75 96 aa5.52□□□□□ -1.53
HMGN1-208ENST00000443046 ATOX1O00244 68 aa5.49□□□□□ -1.53
HMGN1-208ENST00000443046 H0Y9P7 68 aa5.47□□□□□ -1.53
HMGN1-208ENST00000443046 UQCRQO14949 82 aa5.47□□□□□ -1.53
HMGN1-208ENST00000443046 A0A1B0GV90 55 aa5.44□□□□□ -1.54
HMGN1-208ENST00000443046 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
HMGN1-208ENST00000443046 KRTAP19-3Q7Z4W3 81 aa5.43□□□□□ -1.54
HMGN1-208ENST00000443046 MT1EP04732 61 aa5.4□□□□□ -1.54
HMGN1-208ENST00000443046 KRTAP5-10Q6L8G5 202 aa5.39□□□□□ -1.55
HMGN1-208ENST00000443046 FAM240AA0A1B0GVK7 77 aa5.35□□□□□ -1.55
HMGN1-208ENST00000443046 MT4P47944 62 aa5.35□□□□□ -1.55
HMGN1-208ENST00000443046 LINC00208Q96KT6 92 aa5.34□□□□□ -1.55
HMGN1-208ENST00000443046 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
HMGN1-208ENST00000443046 CYSTM1Q9H1C7 97 aa5.32□□□□□ -1.56
HMGN1-208ENST00000443046 MT-ATP8P03928 68 aa5.3□□□□□ -1.56
HMGN1-208ENST00000443046 DMAC1Q96GE9 116 aa5.28□□□□□ -1.56
HMGN1-208ENST00000443046 ATP5EP2Q5VTU8 51 aa5.27□□□□□ -1.57
HMGN1-208ENST00000443046 MT1GP13640 62 aa5.26□□□□□ -1.57
HMGN1-208ENST00000443046 HIST1H4AP62805 103 aaKnown RBP5.26□□□□□ -1.57
HMGN1-208ENST00000443046 KRTAP5-7Q6L8G8 165 aa5.24□□□□□ -1.57
HMGN1-208ENST00000443046 KRTAP5-4Q6L8H1 288 aa5.24□□□□□ -1.57
HMGN1-208ENST00000443046 LINC00643Q86TS7 51 aa5.24□□□□□ -1.57
HMGN1-208ENST00000443046 MP68P56378 58 aa5.22□□□□□ -1.57
HMGN1-208ENST00000443046 OCR1Q9BZK8 76 aa5.21□□□□□ -1.58
HMGN1-208ENST00000443046 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
HMGN1-208ENST00000443046 J3QR89 54 aa5.17□□□□□ -1.58
HMGN1-208ENST00000443046 MT1MQ8N339 61 aa5.17□□□□□ -1.58
HMGN1-208ENST00000443046 TRAV7A0A075B6U4 112 aa5.15□□□□□ -1.59
HMGN1-208ENST00000443046 KRTAP19-5Q3LI72 72 aa5.14□□□□□ -1.59
HMGN1-208ENST00000443046 H3BPC8 53 aa5.12□□□□□ -1.59
HMGN1-208ENST00000443046 CAMK2N1Q7Z7J9 78 aa5.12□□□□□ -1.59
HMGN1-208ENST00000443046 KRTAP13-4Q3LI77 160 aa5.08□□□□□ -1.6
HMGN1-208ENST00000443046 MT1LQ93083 61 aa5.07□□□□□ -1.6
HMGN1-208ENST00000443046 A0A0D9SG42 100 aa5.06□□□□□ -1.6
HMGN1-208ENST00000443046 K7ERU9 68 aa5.06□□□□□ -1.6
HMGN1-208ENST00000443046 KRTAP4-3Q9BYR4 195 aa5.06□□□□□ -1.6
HMGN1-208ENST00000443046 ACYP2P14621 99 aa5.04□□□□□ -1.6
HMGN1-208ENST00000443046 SPTSSBQ8NFR3 76 aa5.04□□□□□ -1.6
HMGN1-208ENST00000443046 SCGB1A1P11684 91 aa4.98□□□□□ -1.61
HMGN1-208ENST00000443046 KRTAP20-2Q3LI61 65 aa4.95□□□□□ -1.62
HMGN1-208ENST00000443046 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
HMGN1-208ENST00000443046 CHKB-CPT1BH3BT56 60 aa4.88□□□□□ -1.63
HMGN1-208ENST00000443046 SMIM20Q8N5G0 67 aa4.88□□□□□ -1.63
HMGN1-208ENST00000443046 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
HMGN1-208ENST00000443046 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms