RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ATOX1O00244 68 aa5.17□□□□□ -1.58
TTC28-203ENST00000442232 NDUFC1O43677 76 aa5.17□□□□□ -1.58
TTC28-203ENST00000442232 ACYP1P07311 99 aa5.16□□□□□ -1.58
TTC28-203ENST00000442232 ATP5EP2Q5VTU8 51 aa5.16□□□□□ -1.58
TTC28-203ENST00000442232 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.58
TTC28-203ENST00000442232 A0A087WVE0 104 aa5.15□□□□□ -1.59
TTC28-203ENST00000442232 H0Y9P7 68 aa5.15□□□□□ -1.59
TTC28-203ENST00000442232 UQCRQO14949 82 aa5.15□□□□□ -1.59
TTC28-203ENST00000442232 HIST1H4AP62805 103 aaKnown RBP5.15□□□□□ -1.59
TTC28-203ENST00000442232 H0YAA0 97 aa5.12□□□□□ -1.59
TTC28-203ENST00000442232 PCP4L1A6NKN8 68 aa5.1□□□□□ -1.59
TTC28-203ENST00000442232 A8MUN3 132 aa5.1□□□□□ -1.59
TTC28-203ENST00000442232 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
TTC28-203ENST00000442232 FAM240AA0A1B0GVK7 77 aa5.09□□□□□ -1.59
TTC28-203ENST00000442232 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
TTC28-203ENST00000442232 ADM2Q7Z4H4 148 aa5.07□□□□□ -1.6
TTC28-203ENST00000442232 PRO2289Q9P1D8 64 aa5.07□□□□□ -1.6
TTC28-203ENST00000442232 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
TTC28-203ENST00000442232 LINC00208Q96KT6 92 aa5.04□□□□□ -1.6
TTC28-203ENST00000442232 MP68P56378 58 aa5.03□□□□□ -1.6
TTC28-203ENST00000442232 KMT2DO14686 5537 aa5.03□□□□□ -1.6
TTC28-203ENST00000442232 PLAC4Q8WY50 150 aa5.02□□□□□ -1.61
TTC28-203ENST00000442232 C20orf197Q8N268 126 aa5.01□□□□□ -1.61
TTC28-203ENST00000442232 LINC00643Q86TS7 51 aa5□□□□□ -1.61
TTC28-203ENST00000442232 R4GN34 69 aa4.99□□□□□ -1.61
TTC28-203ENST00000442232 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
TTC28-203ENST00000442232 OCR1Q9BZK8 76 aa4.94□□□□□ -1.62
TTC28-203ENST00000442232 M0QZ58 72 aa4.93□□□□□ -1.62
TTC28-203ENST00000442232 SPRR2EP22531 72 aa4.93□□□□□ -1.62
TTC28-203ENST00000442232 SPRR2BP35325 72 aa4.93□□□□□ -1.62
TTC28-203ENST00000442232 SPRR2AP35326 72 aa4.93□□□□□ -1.62
TTC28-203ENST00000442232 MT1XP80297 61 aa4.93□□□□□ -1.62
TTC28-203ENST00000442232 H3BPC8 53 aa4.92□□□□□ -1.62
TTC28-203ENST00000442232 KRTAP2-3P0C7H8 128 aa4.92□□□□□ -1.62
TTC28-203ENST00000442232 KRTAP2-4Q9BYR9 128 aa4.92□□□□□ -1.62
TTC28-203ENST00000442232 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
TTC28-203ENST00000442232 P0C880 135 aa4.9□□□□□ -1.63
TTC28-203ENST00000442232 SCGB1A1P11684 91 aa4.88□□□□□ -1.63
TTC28-203ENST00000442232 LINC01554Q52M75 96 aa4.88□□□□□ -1.63
TTC28-203ENST00000442232 DMAC1Q96GE9 116 aa4.88□□□□□ -1.63
TTC28-203ENST00000442232 KRTAP12-2P59991 146 aa4.87□□□□□ -1.63
TTC28-203ENST00000442232 J3QR89 54 aa4.84□□□□□ -1.63
TTC28-203ENST00000442232 TRAV7A0A075B6U4 112 aa4.8□□□□□ -1.64
TTC28-203ENST00000442232 MT-ATP8P03928 68 aa4.8□□□□□ -1.64
TTC28-203ENST00000442232 SPTSSBQ8NFR3 76 aa4.8□□□□□ -1.64
TTC28-203ENST00000442232 KRTAP3-2Q9BYR7 98 aa4.79□□□□□ -1.64
TTC28-203ENST00000442232 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
TTC28-203ENST00000442232 A0A1B0GV90 55 aa4.77□□□□□ -1.65
TTC28-203ENST00000442232 ACYP2P14621 99 aa4.77□□□□□ -1.65
TTC28-203ENST00000442232 SPRR2DP22532 72 aa4.76□□□□□ -1.65
TTC28-203ENST00000442232 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
TTC28-203ENST00000442232 KRTAP2-1Q9BYU5 128 aa4.75□□□□□ -1.65
TTC28-203ENST00000442232 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
TTC28-203ENST00000442232 CHKB-CPT1BH3BT56 60 aa4.73□□□□□ -1.65
TTC28-203ENST00000442232 KRTAP4-8Q9BYQ9 185 aa4.73□□□□□ -1.65
TTC28-203ENST00000442232 KRTAP10-7P60409 375 aaPredicted RBP4.7□□□□□ -1.66
TTC28-203ENST00000442232 SMIM20Q8N5G0 67 aa4.7□□□□□ -1.66
TTC28-203ENST00000442232 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
TTC28-203ENST00000442232 LCE3BQ5TA77 95 aa4.63□□□□□ -1.67
TTC28-203ENST00000442232 CAMK2N1Q7Z7J9 78 aa4.59□□□□□ -1.67
TTC28-203ENST00000442232 SNURFQ9Y675 71 aa4.58□□□□□ -1.68
TTC28-203ENST00000442232 K7ERU9 68 aa4.57□□□□□ -1.68
TTC28-203ENST00000442232 SPANXA2-OT1Q8N9U9 137 aa4.55□□□□□ -1.68
TTC28-203ENST00000442232 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
TTC28-203ENST00000442232 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
TTC28-203ENST00000442232 SEC61GP60059 68 aa4.48□□□□□ -1.69
TTC28-203ENST00000442232 SERP1Q9Y6X1 66 aa4.46□□□□□ -1.7
TTC28-203ENST00000442232 SERP2Q8N6R1 65 aa4.45□□□□□ -1.7
TTC28-203ENST00000442232 COA5Q86WW8 74 aa4.44□□□□□ -1.7
TTC28-203ENST00000442232 A0A0D9SG42 100 aa4.43□□□□□ -1.7
TTC28-203ENST00000442232 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
TTC28-203ENST00000442232 MT1EP04732 61 aa4.39□□□□□ -1.71
TTC28-203ENST00000442232 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
TTC28-203ENST00000442232 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
TTC28-203ENST00000442232 SPINT4Q6UDR6 99 aa4.39□□□□□ -1.71
TTC28-203ENST00000442232 SPATA8Q6RVD6 105 aa4.36□□□□□ -1.71
TTC28-203ENST00000442232 A0A1B0GU33 70 aa4.35□□□□□ -1.71
TTC28-203ENST00000442232 CYSTM1Q9H1C7 97 aa4.32□□□□□ -1.72
TTC28-203ENST00000442232 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
TTC28-203ENST00000442232 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
TTC28-203ENST00000442232 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
TTC28-203ENST00000442232 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
TTC28-203ENST00000442232 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
TTC28-203ENST00000442232 SMIM26A0A096LP01 95 aa4.27□□□□□ -1.73
TTC28-203ENST00000442232 MT1GP13640 62 aa4.27□□□□□ -1.73
TTC28-203ENST00000442232 COX7CP15954 63 aa4.27□□□□□ -1.73
TTC28-203ENST00000442232 A0A1B0GU69 56 aa4.24□□□□□ -1.73
TTC28-203ENST00000442232 H7BZZ5 65 aa4.22□□□□□ -1.73
TTC28-203ENST00000442232 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
TTC28-203ENST00000442232 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
TTC28-203ENST00000442232 MT1MQ8N339 61 aa4.19□□□□□ -1.74
TTC28-203ENST00000442232 TNP1P09430 55 aa4.18□□□□□ -1.74
TTC28-203ENST00000442232 MT1LQ93083 61 aa4.17□□□□□ -1.74
TTC28-203ENST00000442232 A8MU10 97 aa4.16□□□□□ -1.74
TTC28-203ENST00000442232 MT4P47944 62 aa4.16□□□□□ -1.74
TTC28-203ENST00000442232 C10orf95Q9H7T3 257 aa4.15□□□□□ -1.75
TTC28-203ENST00000442232 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
TTC28-203ENST00000442232 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
TTC28-203ENST00000442232 PRR15LQ9BU68 103 aa4.13□□□□□ -1.75
TTC28-203ENST00000442232 ANAPC13Q9BS18 74 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms