RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CSMD3Q7Z407 3707 aa1.78□□□□□ -2.12
CDC42BPA-207ENST00000441725 H0YGG7 62 aa1.78□□□□□ -2.13
CDC42BPA-207ENST00000441725 RPL37P61927 97 aaKnown RBP1.78□□□□□ -2.13
CDC42BPA-207ENST00000441725 WFDC13Q8IUB5 93 aa1.78□□□□□ -2.13
CDC42BPA-207ENST00000441725 UBE2DNLQ8IWF7 75 aa1.78□□□□□ -2.13
CDC42BPA-207ENST00000441725 LYSTQ99698 3801 aa1.78□□□□□ -2.13
CDC42BPA-207ENST00000441725 C6orf48Q9UBA6 75 aa1.78□□□□□ -2.13
CDC42BPA-207ENST00000441725 KRTAP5-5Q701N2 237 aaPredicted RBP1.77□□□□□ -2.13
CDC42BPA-207ENST00000441725 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
CDC42BPA-207ENST00000441725 MUC2Q02817 5179 aa1.76□□□□□ -2.13
CDC42BPA-207ENST00000441725 PIGYQ3MUY2 71 aa1.76□□□□□ -2.13
CDC42BPA-207ENST00000441725 HECTD4Q9Y4D8 3996 aa1.76□□□□□ -2.13
CDC42BPA-207ENST00000441725 WFDC10BQ8IUB3 73 aa1.76□□□□□ -2.13
CDC42BPA-207ENST00000441725 KRTAP12-1P59990 96 aa1.75□□□□□ -2.13
CDC42BPA-207ENST00000441725 Q6ZSA8 131 aa1.75□□□□□ -2.13
CDC42BPA-207ENST00000441725 TP53AIP1Q9HCN2 124 aa1.75□□□□□ -2.13
CDC42BPA-207ENST00000441725 DNAH9Q9NYC9 4486 aa1.75□□□□□ -2.13
CDC42BPA-207ENST00000441725 LYNX1P0DP58 116 aa1.75□□□□□ -2.13
CDC42BPA-207ENST00000441725 SPINK13Q1W4C9 94 aa1.74□□□□□ -2.13
CDC42BPA-207ENST00000441725 IGLV5-48A0A075B6I7 105 aa1.73□□□□□ -2.13
CDC42BPA-207ENST00000441725 PRCDQ00LT1 54 aa1.72□□□□□ -2.13
CDC42BPA-207ENST00000441725 DMBT1Q9UGM3 2413 aaPredicted RBP1.72□□□□□ -2.13
CDC42BPA-207ENST00000441725 UNQ6190/PRO20217Q6UXQ8 127 aa1.72□□□□□ -2.13
CDC42BPA-207ENST00000441725 COX6B2Q6YFQ2 88 aa1.72□□□□□ -2.13
CDC42BPA-207ENST00000441725 RNF213Q63HN8 5207 aa1.72□□□□□ -2.13
CDC42BPA-207ENST00000441725 WNK2Q9Y3S1 2297 aa1.71□□□□□ -2.13
CDC42BPA-207ENST00000441725 COX6A2Q02221 97 aa1.71□□□□□ -2.14
CDC42BPA-207ENST00000441725 KAAG1Q9UBP8 84 aa1.71□□□□□ -2.14
CDC42BPA-207ENST00000441725 KRTAP13-1Q8IUC0 172 aa1.71□□□□□ -2.14
CDC42BPA-207ENST00000441725 DEFB130BP0DP73 79 aa1.7□□□□□ -2.14
CDC42BPA-207ENST00000441725 DEFB130AP0DP74 79 aa1.7□□□□□ -2.14
CDC42BPA-207ENST00000441725 CRCT1Q9UGL9 99 aa1.7□□□□□ -2.14
CDC42BPA-207ENST00000441725 KMT2AQ03164 3969 aa1.7□□□□□ -2.14
CDC42BPA-207ENST00000441725 SRRM2Q9UQ35 2752 aaKnown RBP1.7□□□□□ -2.14
CDC42BPA-207ENST00000441725 DEFB104AQ8WTQ1 72 aa1.69□□□□□ -2.14
CDC42BPA-207ENST00000441725 DNAH7Q8WXX0 4024 aa1.69□□□□□ -2.14
CDC42BPA-207ENST00000441725 FAT4Q6V0I7 4981 aa1.69□□□□□ -2.14
CDC42BPA-207ENST00000441725 DNAH10Q8IVF4 4471 aa1.69□□□□□ -2.14
CDC42BPA-207ENST00000441725 USMG5Q96IX5 58 aa1.69□□□□□ -2.14
CDC42BPA-207ENST00000441725 DNAH3Q8TD57 4116 aa1.69□□□□□ -2.14
CDC42BPA-207ENST00000441725 HMCN2Q8NDA2 5059 aa1.68□□□□□ -2.14
CDC42BPA-207ENST00000441725 M0QY20 66 aa1.68□□□□□ -2.14
CDC42BPA-207ENST00000441725 H1FX-AS1Q4G0G2 97 aa1.68□□□□□ -2.14
CDC42BPA-207ENST00000441725 PLECQ15149 4684 aaKnown RBP1.68□□□□□ -2.14
CDC42BPA-207ENST00000441725 STARD9Q9P2P6 4700 aa1.67□□□□□ -2.14
CDC42BPA-207ENST00000441725 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
CDC42BPA-207ENST00000441725 LCE1BQ5T7P3 118 aa1.66□□□□□ -2.14
CDC42BPA-207ENST00000441725 HSPG2P98160 4391 aa1.66□□□□□ -2.14
CDC42BPA-207ENST00000441725 PKHD1P08F94 4074 aa1.66□□□□□ -2.14
CDC42BPA-207ENST00000441725 MMP24-AS1A0A0U1RRL7 71 aa1.66□□□□□ -2.14
CDC42BPA-207ENST00000441725 A8MTW9 85 aa1.66□□□□□ -2.14
CDC42BPA-207ENST00000441725 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
CDC42BPA-207ENST00000441725 HUWE1Q7Z6Z7 4374 aaKnown RBP1.65□□□□□ -2.14
CDC42BPA-207ENST00000441725 DYNC1H1Q14204 4646 aaKnown RBP1.65□□□□□ -2.15
CDC42BPA-207ENST00000441725 DEFB108AA8MXU0 73 aa1.64□□□□□ -2.15
CDC42BPA-207ENST00000441725 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
CDC42BPA-207ENST00000441725 DEFB105AQ8NG35 78 aa1.64□□□□□ -2.15
CDC42BPA-207ENST00000441725 APLNQ9ULZ1 77 aa1.64□□□□□ -2.15
CDC42BPA-207ENST00000441725 FAT2Q9NYQ8 4349 aa1.63□□□□□ -2.15
CDC42BPA-207ENST00000441725 SPRR1AP35321 89 aa1.62□□□□□ -2.15
CDC42BPA-207ENST00000441725 MYCBP2O75592 4640 aa1.62□□□□□ -2.15
CDC42BPA-207ENST00000441725 K7EIL1 84 aa1.62□□□□□ -2.15
CDC42BPA-207ENST00000441725 WT1-ASQ06250 92 aa1.62□□□□□ -2.15
CDC42BPA-207ENST00000441725 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
CDC42BPA-207ENST00000441725 TOMM7Q9P0U1 55 aa1.61□□□□□ -2.15
CDC42BPA-207ENST00000441725 DNAH11Q96DT5 4516 aa1.61□□□□□ -2.15
CDC42BPA-207ENST00000441725 DEFB131AP59861 70 aa1.6□□□□□ -2.15
CDC42BPA-207ENST00000441725 CLPSL2Q6UWE3 100 aa1.59□□□□□ -2.15
CDC42BPA-207ENST00000441725 RPL39P5Q59GN2 51 aa1.59□□□□□ -2.16
CDC42BPA-207ENST00000441725 DEFB108BQ8NET1 73 aa1.59□□□□□ -2.16
CDC42BPA-207ENST00000441725 FSIP2Q5CZC0 6907 aa1.59□□□□□ -2.16
CDC42BPA-207ENST00000441725 TMEM167AQ8TBQ9 72 aa1.58□□□□□ -2.16
CDC42BPA-207ENST00000441725 PRO0255Q9UI72 69 aa1.58□□□□□ -2.16
CDC42BPA-207ENST00000441725 APOBP04114 4563 aaKnown RBP1.58□□□□□ -2.16
CDC42BPA-207ENST00000441725 PRLHP81277 87 aa1.57□□□□□ -2.16
CDC42BPA-207ENST00000441725 VPS13DQ5THJ4 4388 aa1.57□□□□□ -2.16
CDC42BPA-207ENST00000441725 PKD1P98161 4303 aa1.57□□□□□ -2.16
CDC42BPA-207ENST00000441725 DNAH2Q9P225 4427 aa1.56□□□□□ -2.16
CDC42BPA-207ENST00000441725 KLK9Q2XQG4 91 aa1.56□□□□□ -2.16
CDC42BPA-207ENST00000441725 FAT1Q14517 4588 aa1.56□□□□□ -2.16
CDC42BPA-207ENST00000441725 LRP2P98164 4655 aa1.55□□□□□ -2.16
CDC42BPA-207ENST00000441725 DNAH17Q9UFH2 4485 aa1.55□□□□□ -2.16
CDC42BPA-207ENST00000441725 K7EIM0 57 aa1.55□□□□□ -2.16
CDC42BPA-207ENST00000441725 DNAH6Q9C0G6 4158 aa1.54□□□□□ -2.16
CDC42BPA-207ENST00000441725 SPRR1BP22528 89 aa1.54□□□□□ -2.16
CDC42BPA-207ENST00000441725 S4R3F8 94 aa1.54□□□□□ -2.16
CDC42BPA-207ENST00000441725 Q5VSD8 79 aa1.52□□□□□ -2.17
CDC42BPA-207ENST00000441725 H3BUA1 57 aa1.51□□□□□ -2.17
CDC42BPA-207ENST00000441725 H3BUX3 64 aa1.51□□□□□ -2.17
CDC42BPA-207ENST00000441725 LRP1BQ9NZR2 4599 aa1.51□□□□□ -2.17
CDC42BPA-207ENST00000441725 PKHD1L1Q86WI1 4243 aa1.5□□□□□ -2.17
CDC42BPA-207ENST00000441725 SPINK1P00995 79 aa1.5□□□□□ -2.17
CDC42BPA-207ENST00000441725 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
CDC42BPA-207ENST00000441725 MACF1Q9UPN3 7388 aaKnown RBP1.5□□□□□ -2.17
CDC42BPA-207ENST00000441725 VPS13BQ7Z7G8 4022 aa1.5□□□□□ -2.17
CDC42BPA-207ENST00000441725 APELAP0DMC3 54 aa1.48□□□□□ -2.17
CDC42BPA-207ENST00000441725 DEFB136Q30KP8 78 aa1.48□□□□□ -2.17
CDC42BPA-207ENST00000441725 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
CDC42BPA-207ENST00000441725 DNAH5Q8TE73 4624 aa1.48□□□□□ -2.17
CDC42BPA-207ENST00000441725 NEBP20929 6669 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms