RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 PRLHP81277 87 aa3.69□□□□□ -1.82
HDAC6-210ENST00000441703 ADM2Q7Z4H4 148 aa3.69□□□□□ -1.82
HDAC6-210ENST00000441703 UQCR11O14957 56 aa3.68□□□□□ -1.82
HDAC6-210ENST00000441703 MIR22HGQ0VDD5 57 aa3.68□□□□□ -1.82
HDAC6-210ENST00000441703 KRTAP13-3Q3SY46 172 aa3.68□□□□□ -1.82
HDAC6-210ENST00000441703 DMAC1Q96GE9 116 aa3.68□□□□□ -1.82
HDAC6-210ENST00000441703 A0A1B0GU69 56 aa3.67□□□□□ -1.82
HDAC6-210ENST00000441703 SEC61BP60468 96 aaKnown RBP3.66□□□□□ -1.82
HDAC6-210ENST00000441703 TYMSOSQ8TAI1 123 aa3.66□□□□□ -1.82
HDAC6-210ENST00000441703 LORP23490 312 aaPredicted RBP3.65□□□□□ -1.83
HDAC6-210ENST00000441703 KRTAP10-6P60371 365 aaPredicted RBP3.65□□□□□ -1.83
HDAC6-210ENST00000441703 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.83
HDAC6-210ENST00000441703 SYNE2Q8WXH0 6885 aaKnown RBP3.64□□□□□ -1.83
HDAC6-210ENST00000441703 IGHV6-1A0A0B4J1U7 121 aa3.64□□□□□ -1.83
HDAC6-210ENST00000441703 M0R2T5 61 aa3.64□□□□□ -1.83
HDAC6-210ENST00000441703 MT1HP80294 61 aa3.64□□□□□ -1.83
HDAC6-210ENST00000441703 CSAG1Q6PB30 78 aa3.64□□□□□ -1.83
HDAC6-210ENST00000441703 KRTAP13-1Q8IUC0 172 aa3.64□□□□□ -1.83
HDAC6-210ENST00000441703 KRTAP4-1Q9BYQ7 146 aa3.64□□□□□ -1.83
HDAC6-210ENST00000441703 ZNF861PO60384 105 aa3.63□□□□□ -1.83
HDAC6-210ENST00000441703 LINC00483Q53H64 154 aa3.63□□□□□ -1.83
HDAC6-210ENST00000441703 Q5W150 140 aa3.62□□□□□ -1.83
HDAC6-210ENST00000441703 LCE2CQ5TA81 110 aa3.61□□□□□ -1.83
HDAC6-210ENST00000441703 LINC00304Q8N9R0 145 aa3.61□□□□□ -1.83
HDAC6-210ENST00000441703 ZNF706Q9Y5V0 76 aaPredicted RBP3.6□□□□□ -1.83
HDAC6-210ENST00000441703 NOTCH2NLQ7Z3S9 236 aa3.59□□□□□ -1.83
HDAC6-210ENST00000441703 IGKV2-30P06310 120 aa3.58□□□□□ -1.84
HDAC6-210ENST00000441703 USH2AO75445 5202 aa3.58□□□□□ -1.84
HDAC6-210ENST00000441703 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
HDAC6-210ENST00000441703 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
HDAC6-210ENST00000441703 MACF1Q9UPN3 7388 aaKnown RBP3.57□□□□□ -1.84
HDAC6-210ENST00000441703 NEBP20929 6669 aa3.56□□□□□ -1.84
HDAC6-210ENST00000441703 IGLV9-49A0A0B4J1Y8 123 aa3.56□□□□□ -1.84
HDAC6-210ENST00000441703 KRTAP13-2Q52LG2 175 aa3.56□□□□□ -1.84
HDAC6-210ENST00000441703 ROMO1P60602 79 aa3.55□□□□□ -1.84
HDAC6-210ENST00000441703 KRTAP19-2Q3LHN2 52 aa3.54□□□□□ -1.84
HDAC6-210ENST00000441703 ANAPC11Q9NYG5 84 aa3.53□□□□□ -1.84
HDAC6-210ENST00000441703 IGKV2D-30A0A075B6S6 120 aa3.52□□□□□ -1.85
HDAC6-210ENST00000441703 A8MUU9 505 aa3.52□□□□□ -1.85
HDAC6-210ENST00000441703 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
HDAC6-210ENST00000441703 COX6B2Q6YFQ2 88 aa3.52□□□□□ -1.85
HDAC6-210ENST00000441703 KRTAP19-1Q8IUB9 90 aa3.51□□□□□ -1.85
HDAC6-210ENST00000441703 SSBP3-AS1Q7Z2R9 100 aa3.5□□□□□ -1.85
HDAC6-210ENST00000441703 XP32Q5T750 250 aa3.48□□□□□ -1.85
HDAC6-210ENST00000441703 KRTAP6-3Q3LI67 103 aa3.46□□□□□ -1.86
HDAC6-210ENST00000441703 KRTAP16-1A8MUX0 517 aa3.45□□□□□ -1.86
HDAC6-210ENST00000441703 FLGP20930 4061 aaPredicted RBP3.44□□□□□ -1.86
HDAC6-210ENST00000441703 H0YAA0 97 aa3.44□□□□□ -1.86
HDAC6-210ENST00000441703 P0C880 135 aa3.43□□□□□ -1.86
HDAC6-210ENST00000441703 A0A1B0GU33 70 aa3.42□□□□□ -1.86
HDAC6-210ENST00000441703 K7ERS5 55 aa3.42□□□□□ -1.86
HDAC6-210ENST00000441703 SPINK1P00995 79 aa3.42□□□□□ -1.86
HDAC6-210ENST00000441703 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
HDAC6-210ENST00000441703 RPS29P62273 56 aaKnown RBP3.41□□□□□ -1.86
HDAC6-210ENST00000441703 H1FX-AS1Q4G0G2 97 aa3.41□□□□□ -1.86
HDAC6-210ENST00000441703 LCE2BO14633 110 aa3.35□□□□□ -1.87
HDAC6-210ENST00000441703 KRTAP9-8Q9BYQ0 159 aa3.35□□□□□ -1.87
HDAC6-210ENST00000441703 C9orf92A6NGG3 77 aa3.34□□□□□ -1.87
HDAC6-210ENST00000441703 KRTAP15-1Q3LI76 137 aa3.33□□□□□ -1.88
HDAC6-210ENST00000441703 MUC12Q9UKN1 5478 aa3.32□□□□□ -1.88
HDAC6-210ENST00000441703 KRTAP19-6Q3LI70 58 aa3.32□□□□□ -1.88
HDAC6-210ENST00000441703 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
HDAC6-210ENST00000441703 C20orf166-AS1Q96NR2 134 aa3.31□□□□□ -1.88
HDAC6-210ENST00000441703 RPL37P61927 97 aaKnown RBP3.29□□□□□ -1.88
HDAC6-210ENST00000441703 KRTAP3-1Q9BYR8 98 aa3.29□□□□□ -1.88
HDAC6-210ENST00000441703 MT2AP02795 61 aa3.28□□□□□ -1.88
HDAC6-210ENST00000441703 KRTAP10-10P60014 251 aa3.28□□□□□ -1.88
HDAC6-210ENST00000441703 CRIPTQ9P021 101 aa3.28□□□□□ -1.88
HDAC6-210ENST00000441703 KMT2DO14686 5537 aa3.27□□□□□ -1.89
HDAC6-210ENST00000441703 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
HDAC6-210ENST00000441703 MT1FP04733 61 aa3.26□□□□□ -1.89
HDAC6-210ENST00000441703 KRTAP9-3Q9BYQ3 159 aa3.26□□□□□ -1.89
HDAC6-210ENST00000441703 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
HDAC6-210ENST00000441703 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
HDAC6-210ENST00000441703 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
HDAC6-210ENST00000441703 KRTAP3-2Q9BYR7 98 aa3.17□□□□□ -1.9
HDAC6-210ENST00000441703 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
HDAC6-210ENST00000441703 MDN1Q9NU22 5596 aa3.15□□□□□ -1.9
HDAC6-210ENST00000441703 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
HDAC6-210ENST00000441703 S4R3F8 94 aa3.15□□□□□ -1.91
HDAC6-210ENST00000441703 A0A0D9SG42 100 aa3.13□□□□□ -1.91
HDAC6-210ENST00000441703 KRTAP3-3Q9BYR6 98 aa3.13□□□□□ -1.91
HDAC6-210ENST00000441703 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
HDAC6-210ENST00000441703 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
HDAC6-210ENST00000441703 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
HDAC6-210ENST00000441703 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
HDAC6-210ENST00000441703 KRTAP12-1P59990 96 aa3.09□□□□□ -1.91
HDAC6-210ENST00000441703 KRTAP12-2P59991 146 aa3.08□□□□□ -1.92
HDAC6-210ENST00000441703 M0QZ58 72 aa3.06□□□□□ -1.92
HDAC6-210ENST00000441703 PLAC4Q8WY50 150 aa3.04□□□□□ -1.92
HDAC6-210ENST00000441703 SPRR2EP22531 72 aa3.03□□□□□ -1.92
HDAC6-210ENST00000441703 SPRR2BP35325 72 aa3.03□□□□□ -1.92
HDAC6-210ENST00000441703 SPRR2AP35326 72 aa3.03□□□□□ -1.92
HDAC6-210ENST00000441703 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
HDAC6-210ENST00000441703 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
HDAC6-210ENST00000441703 SPRR2DP22532 72 aa2.93□□□□□ -1.94
HDAC6-210ENST00000441703 KRTAP10-5P60370 271 aa2.9□□□□□ -1.95
HDAC6-210ENST00000441703 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
HDAC6-210ENST00000441703 LCE3BQ5TA77 95 aa2.88□□□□□ -1.95
HDAC6-210ENST00000441703 LCE1AQ5T7P2 110 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 193.7 ms