RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 LRP2P98164 4655 aa3.49□□□□□ -1.85
PUM1-207ENST00000440538 LINC01554Q52M75 96 aa3.48□□□□□ -1.85
PUM1-207ENST00000440538 CSAG1Q6PB30 78 aa3.48□□□□□ -1.85
PUM1-207ENST00000440538 TNXBP22105 4242 aa3.48□□□□□ -1.85
PUM1-207ENST00000440538 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
PUM1-207ENST00000440538 IGKV2D-30A0A075B6S6 120 aa3.46□□□□□ -1.86
PUM1-207ENST00000440538 IGKV2-30P06310 120 aa3.46□□□□□ -1.86
PUM1-207ENST00000440538 DMAC1Q96GE9 116 aa3.46□□□□□ -1.86
PUM1-207ENST00000440538 SPATA8Q6RVD6 105 aa3.45□□□□□ -1.86
PUM1-207ENST00000440538 UQCR11O14957 56 aa3.43□□□□□ -1.86
PUM1-207ENST00000440538 UBR4Q5T4S7 5183 aa3.42□□□□□ -1.86
PUM1-207ENST00000440538 RNF213Q63HN8 5207 aa3.42□□□□□ -1.86
PUM1-207ENST00000440538 CRIPTQ9P021 101 aa3.42□□□□□ -1.86
PUM1-207ENST00000440538 MUC2Q02817 5179 aa3.41□□□□□ -1.86
PUM1-207ENST00000440538 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
PUM1-207ENST00000440538 XP32Q5T750 250 aa3.38□□□□□ -1.87
PUM1-207ENST00000440538 KRTAP16-1A8MUX0 517 aa3.37□□□□□ -1.87
PUM1-207ENST00000440538 RPS29P62273 56 aaKnown RBP3.37□□□□□ -1.87
PUM1-207ENST00000440538 HMCN2Q8NDA2 5059 aa3.35□□□□□ -1.87
PUM1-207ENST00000440538 H0YAA0 97 aa3.34□□□□□ -1.87
PUM1-207ENST00000440538 TPRXLQ17RH7 258 aa3.32□□□□□ -1.88
PUM1-207ENST00000440538 KRTAP3-3Q9BYR6 98 aa3.3□□□□□ -1.88
PUM1-207ENST00000440538 KRTAP3-2Q9BYR7 98 aa3.3□□□□□ -1.88
PUM1-207ENST00000440538 A8MUU9 505 aa3.3□□□□□ -1.88
PUM1-207ENST00000440538 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
PUM1-207ENST00000440538 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
PUM1-207ENST00000440538 COX6B2Q6YFQ2 88 aa3.29□□□□□ -1.88
PUM1-207ENST00000440538 SEC61BP60468 96 aaKnown RBP3.29□□□□□ -1.88
PUM1-207ENST00000440538 A0A1B0GU33 70 aa3.27□□□□□ -1.89
PUM1-207ENST00000440538 ROMO1P60602 79 aa3.27□□□□□ -1.89
PUM1-207ENST00000440538 C20orf166-AS1Q96NR2 134 aa3.27□□□□□ -1.89
PUM1-207ENST00000440538 KRTAP3-1Q9BYR8 98 aa3.27□□□□□ -1.89
PUM1-207ENST00000440538 FAT4Q6V0I7 4981 aa3.26□□□□□ -1.89
PUM1-207ENST00000440538 KRTAP4-1Q9BYQ7 146 aa3.26□□□□□ -1.89
PUM1-207ENST00000440538 K7ERS5 55 aa3.25□□□□□ -1.89
PUM1-207ENST00000440538 P0C880 135 aa3.25□□□□□ -1.89
PUM1-207ENST00000440538 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
PUM1-207ENST00000440538 SPINT4Q6UDR6 99 aa3.23□□□□□ -1.89
PUM1-207ENST00000440538 A0A0D9SG42 100 aa3.22□□□□□ -1.89
PUM1-207ENST00000440538 M0R2T5 61 aa3.21□□□□□ -1.9
PUM1-207ENST00000440538 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.9
PUM1-207ENST00000440538 KRTAP13-4Q3LI77 160 aa3.17□□□□□ -1.9
PUM1-207ENST00000440538 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
PUM1-207ENST00000440538 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
PUM1-207ENST00000440538 KRTAP10-6P60371 365 aaPredicted RBP3.12□□□□□ -1.91
PUM1-207ENST00000440538 MUC17Q685J3 4493 aa3.1□□□□□ -1.91
PUM1-207ENST00000440538 S4R3F8 94 aa3.08□□□□□ -1.92
PUM1-207ENST00000440538 FSIP2Q5CZC0 6907 aa3.07□□□□□ -1.92
PUM1-207ENST00000440538 KRTAP12-2P59991 146 aa3.07□□□□□ -1.92
PUM1-207ENST00000440538 KRTAP15-1Q3LI76 137 aa3.05□□□□□ -1.92
PUM1-207ENST00000440538 MT1HP80294 61 aa3.02□□□□□ -1.93
PUM1-207ENST00000440538 LCE2CQ5TA81 110 aa3.02□□□□□ -1.93
PUM1-207ENST00000440538 KRTAP19-2Q3LHN2 52 aa3.01□□□□□ -1.93
PUM1-207ENST00000440538 KRTAP12-1P59990 96 aa2.99□□□□□ -1.93
PUM1-207ENST00000440538 KRTAP10-10P60014 251 aa2.98□□□□□ -1.93
PUM1-207ENST00000440538 FLGP20930 4061 aaPredicted RBP2.96□□□□□ -1.94
PUM1-207ENST00000440538 LORP23490 312 aaPredicted RBP2.92□□□□□ -1.94
PUM1-207ENST00000440538 USH2AO75445 5202 aa2.92□□□□□ -1.94
PUM1-207ENST00000440538 LCE2BO14633 110 aa2.91□□□□□ -1.94
PUM1-207ENST00000440538 R4GN34 69 aa2.9□□□□□ -1.95
PUM1-207ENST00000440538 M0QZ58 72 aa2.9□□□□□ -1.95
PUM1-207ENST00000440538 MT1FP04733 61 aa2.89□□□□□ -1.95
PUM1-207ENST00000440538 LCE2AQ5TA79 106 aaPredicted RBP2.89□□□□□ -1.95
PUM1-207ENST00000440538 MT2AP02795 61 aa2.88□□□□□ -1.95
PUM1-207ENST00000440538 KRTAP9-8Q9BYQ0 159 aa2.86□□□□□ -1.95
PUM1-207ENST00000440538 PLAC4Q8WY50 150 aa2.85□□□□□ -1.95
PUM1-207ENST00000440538 CAMK2N1Q7Z7J9 78 aa2.85□□□□□ -1.95
PUM1-207ENST00000440538 KRTAP19-1Q8IUB9 90 aa2.74□□□□□ -1.97
PUM1-207ENST00000440538 KRTAP9-3Q9BYQ3 159 aa2.74□□□□□ -1.97
PUM1-207ENST00000440538 KRTAP9-2Q9BYQ4 174 aa2.74□□□□□ -1.97
PUM1-207ENST00000440538 KRTAP23-1A1A580 65 aa2.72□□□□□ -1.97
PUM1-207ENST00000440538 SSPOA2VEC9 5147 aa2.7□□□□□ -1.98
PUM1-207ENST00000440538 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
PUM1-207ENST00000440538 MT1BP07438 61 aa2.66□□□□□ -1.98
PUM1-207ENST00000440538 KMT2DO14686 5537 aa2.65□□□□□ -1.98
PUM1-207ENST00000440538 PP632Q6XCG6 107 aa2.61□□□□□ -1.99
PUM1-207ENST00000440538 FCGBPQ9Y6R7 5405 aaPredicted RBP2.61□□□□□ -1.99
PUM1-207ENST00000440538 CRCT1Q9UGL9 99 aa2.61□□□□□ -1.99
PUM1-207ENST00000440538 KRTAP19-8Q3LI54 63 aa2.6□□□□□ -1.99
PUM1-207ENST00000440538 TNP1P09430 55 aa2.58□□□□□ -2
PUM1-207ENST00000440538 SYNE2Q8WXH0 6885 aaKnown RBP2.58□□□□□ -2
PUM1-207ENST00000440538 PRO2289Q9P1D8 64 aa2.56□□□□□ -2
PUM1-207ENST00000440538 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
PUM1-207ENST00000440538 MT1XP80297 61 aa2.56□□□□□ -2
PUM1-207ENST00000440538 KRTAP9-6A0A140TA67 174 aa2.54□□□□□ -2
PUM1-207ENST00000440538 KRTAP10-5P60370 271 aa2.54□□□□□ -2
PUM1-207ENST00000440538 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
PUM1-207ENST00000440538 KRTAP4-8A0A0G2JLE6 195 aa2.52□□□□□ -2.01
PUM1-207ENST00000440538 KRTAP10-7P60409 375 aaPredicted RBP2.52□□□□□ -2.01
PUM1-207ENST00000440538 KRTAP4-8Q9BYQ9 185 aa2.52□□□□□ -2.01
PUM1-207ENST00000440538 LCE3AQ5TA76 89 aa2.51□□□□□ -2.01
PUM1-207ENST00000440538 KRTAP19-6Q3LI70 58 aa2.5□□□□□ -2.01
PUM1-207ENST00000440538 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
PUM1-207ENST00000440538 LOC100996750A0A140TA64 210 aa2.46□□□□□ -2.02
PUM1-207ENST00000440538 KRTAP4-6Q9BYQ5 205 aa2.46□□□□□ -2.02
PUM1-207ENST00000440538 KRTAP10-12P60413 245 aa2.45□□□□□ -2.02
PUM1-207ENST00000440538 INE1O15225 51 aa2.44□□□□□ -2.02
PUM1-207ENST00000440538 KRTAP8-1Q8IUC2 63 aa2.43□□□□□ -2.02
PUM1-207ENST00000440538 SPRR2FQ96RM1 72 aa2.41□□□□□ -2.02
PUM1-207ENST00000440538 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms