RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 Q5W150 140 aa4.74□□□□□ -1.65
AC011228.1-201ENST00000439027 SMIM20Q8N5G0 67 aa4.73□□□□□ -1.65
AC011228.1-201ENST00000439027 TRAV7A0A075B6U4 112 aa4.72□□□□□ -1.65
AC011228.1-201ENST00000439027 TRAV22A0A0B4J277 110 aa4.7□□□□□ -1.66
AC011228.1-201ENST00000439027 H0Y9P7 68 aa4.7□□□□□ -1.66
AC011228.1-201ENST00000439027 USH2AO75445 5202 aa4.7□□□□□ -1.66
AC011228.1-201ENST00000439027 C5orf47Q569G3 176 aa4.69□□□□□ -1.66
AC011228.1-201ENST00000439027 SERP2Q8N6R1 65 aa4.69□□□□□ -1.66
AC011228.1-201ENST00000439027 ANAPC13Q9BS18 74 aa4.68□□□□□ -1.66
AC011228.1-201ENST00000439027 IGKV2D-30A0A075B6S6 120 aa4.67□□□□□ -1.66
AC011228.1-201ENST00000439027 IGKV2-30P06310 120 aa4.67□□□□□ -1.66
AC011228.1-201ENST00000439027 MP68P56378 58 aa4.67□□□□□ -1.66
AC011228.1-201ENST00000439027 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
AC011228.1-201ENST00000439027 FAM236DA0A1B0GTK5 79 aa4.66□□□□□ -1.66
AC011228.1-201ENST00000439027 FAM236CP0DP71 79 aa4.66□□□□□ -1.66
AC011228.1-201ENST00000439027 LINC00208Q96KT6 92 aa4.66□□□□□ -1.66
AC011228.1-201ENST00000439027 SPINK7P58062 85 aa4.65□□□□□ -1.67
AC011228.1-201ENST00000439027 C1orf64Q8NEQ6 169 aa4.65□□□□□ -1.67
AC011228.1-201ENST00000439027 LOC101927531A0A1B0GV80 90 aa4.64□□□□□ -1.67
AC011228.1-201ENST00000439027 COX7CP15954 63 aa4.64□□□□□ -1.67
AC011228.1-201ENST00000439027 H3BPC8 53 aa4.63□□□□□ -1.67
AC011228.1-201ENST00000439027 C7orf65Q6ZTY9 151 aa4.63□□□□□ -1.67
AC011228.1-201ENST00000439027 C20orf197Q8N268 126 aa4.62□□□□□ -1.67
AC011228.1-201ENST00000439027 CYP4F30PQ9H0H9 118 aa4.62□□□□□ -1.67
AC011228.1-201ENST00000439027 SNURFQ9Y675 71 aa4.61□□□□□ -1.67
AC011228.1-201ENST00000439027 RBM12B-AS1Q9P1G2 102 aa4.6□□□□□ -1.67
AC011228.1-201ENST00000439027 MT2AP02795 61 aa4.59□□□□□ -1.67
AC011228.1-201ENST00000439027 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.68
AC011228.1-201ENST00000439027 CCDC179H3BU77 68 aa4.58□□□□□ -1.68
AC011228.1-201ENST00000439027 HRES1P13985 223 aa4.58□□□□□ -1.68
AC011228.1-201ENST00000439027 KLKP1Q107X0 134 aa4.58□□□□□ -1.68
AC011228.1-201ENST00000439027 KRTAP10-10P60014 251 aa4.56□□□□□ -1.68
AC011228.1-201ENST00000439027 MT1FP04733 61 aa4.55□□□□□ -1.68
AC011228.1-201ENST00000439027 C4orf26Q17RF5 130 aa4.55□□□□□ -1.68
AC011228.1-201ENST00000439027 MPLKIPQ8TAP9 179 aa4.54□□□□□ -1.68
AC011228.1-201ENST00000439027 CYSTM1Q9H1C7 97 aa4.53□□□□□ -1.68
AC011228.1-201ENST00000439027 NDUFC1O43677 76 aa4.5□□□□□ -1.69
AC011228.1-201ENST00000439027 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
AC011228.1-201ENST00000439027 H7BZZ5 65 aa4.48□□□□□ -1.69
AC011228.1-201ENST00000439027 SPANXA2-OT1Q8N9U9 137 aa4.46□□□□□ -1.7
AC011228.1-201ENST00000439027 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
AC011228.1-201ENST00000439027 H1FX-AS1Q4G0G2 97 aa4.44□□□□□ -1.7
AC011228.1-201ENST00000439027 DMAC1Q96GE9 116 aa4.43□□□□□ -1.7
AC011228.1-201ENST00000439027 A8MUN3 132 aa4.42□□□□□ -1.7
AC011228.1-201ENST00000439027 ACYP2P14621 99 aa4.4□□□□□ -1.71
AC011228.1-201ENST00000439027 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.71
AC011228.1-201ENST00000439027 TMEM258P61165 79 aa4.39□□□□□ -1.71
AC011228.1-201ENST00000439027 S4R3F8 94 aa4.38□□□□□ -1.71
AC011228.1-201ENST00000439027 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
AC011228.1-201ENST00000439027 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
AC011228.1-201ENST00000439027 V9GYY9 64 aa4.37□□□□□ -1.71
AC011228.1-201ENST00000439027 LCA10Q71F78 164 aa4.35□□□□□ -1.71
AC011228.1-201ENST00000439027 CHKB-CPT1BH3BT56 60 aa4.34□□□□□ -1.71
AC011228.1-201ENST00000439027 COA5Q86WW8 74 aa4.34□□□□□ -1.71
AC011228.1-201ENST00000439027 CSAG1Q6PB30 78 aa4.3□□□□□ -1.72
AC011228.1-201ENST00000439027 SPTSSBQ8NFR3 76 aa4.28□□□□□ -1.72
AC011228.1-201ENST00000439027 SERP1Q9Y6X1 66 aa4.27□□□□□ -1.73
AC011228.1-201ENST00000439027 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
AC011228.1-201ENST00000439027 NEBP20929 6669 aa4.23□□□□□ -1.73
AC011228.1-201ENST00000439027 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
AC011228.1-201ENST00000439027 RPS28P62857 69 aaKnown RBP4.18□□□□□ -1.74
AC011228.1-201ENST00000439027 A6NN06 94 aa4.17□□□□□ -1.74
AC011228.1-201ENST00000439027 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
AC011228.1-201ENST00000439027 H0YAA0 97 aa4.16□□□□□ -1.74
AC011228.1-201ENST00000439027 Q5VV11 94 aa4.15□□□□□ -1.75
AC011228.1-201ENST00000439027 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
AC011228.1-201ENST00000439027 SMIM26A0A096LP01 95 aa4.13□□□□□ -1.75
AC011228.1-201ENST00000439027 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
AC011228.1-201ENST00000439027 MT1BP07438 61 aa4.12□□□□□ -1.75
AC011228.1-201ENST00000439027 P0C880 135 aa4.12□□□□□ -1.75
AC011228.1-201ENST00000439027 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
AC011228.1-201ENST00000439027 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
AC011228.1-201ENST00000439027 A0A1B0GU69 56 aa4.1□□□□□ -1.75
AC011228.1-201ENST00000439027 KRTAP19-8Q3LI54 63 aa4.09□□□□□ -1.75
AC011228.1-201ENST00000439027 SPRR2GQ9BYE4 73 aa4.09□□□□□ -1.75
AC011228.1-201ENST00000439027 Q1T7F1 81 aa4.08□□□□□ -1.76
AC011228.1-201ENST00000439027 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
AC011228.1-201ENST00000439027 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
AC011228.1-201ENST00000439027 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
AC011228.1-201ENST00000439027 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
AC011228.1-201ENST00000439027 PSPHP1O15172 72 aa4.04□□□□□ -1.76
AC011228.1-201ENST00000439027 CRIPTQ9P021 101 aa4.04□□□□□ -1.76
AC011228.1-201ENST00000439027 KMT2DO14686 5537 aa4.03□□□□□ -1.76
AC011228.1-201ENST00000439027 A0A1B0GU33 70 aa4.03□□□□□ -1.76
AC011228.1-201ENST00000439027 R4GN34 69 aa4.03□□□□□ -1.76
AC011228.1-201ENST00000439027 M0QZ58 72 aa4.02□□□□□ -1.77
AC011228.1-201ENST00000439027 KRTAP13-4Q3LI77 160 aa3.98□□□□□ -1.77
AC011228.1-201ENST00000439027 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
AC011228.1-201ENST00000439027 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
AC011228.1-201ENST00000439027 SPATA8Q6RVD6 105 aa3.97□□□□□ -1.77
AC011228.1-201ENST00000439027 LINC01554Q52M75 96 aa3.96□□□□□ -1.78
AC011228.1-201ENST00000439027 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
AC011228.1-201ENST00000439027 UQCR11O14957 56 aa3.95□□□□□ -1.78
AC011228.1-201ENST00000439027 MT3P25713 68 aa3.94□□□□□ -1.78
AC011228.1-201ENST00000439027 A0A0D9SG42 100 aa3.92□□□□□ -1.78
AC011228.1-201ENST00000439027 A6NED7 52 aa3.92□□□□□ -1.78
AC011228.1-201ENST00000439027 A8MU10 97 aa3.9□□□□□ -1.79
AC011228.1-201ENST00000439027 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
AC011228.1-201ENST00000439027 PRO0628Q9UI54 55 aa3.9□□□□□ -1.79
AC011228.1-201ENST00000439027 MIR22HGQ0VDD5 57 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms