RNA–Protein interactions for RNA: ENST00000438610.5

MTA1-208, Transcript of metastasis associated 1, humanhuman

TSL 1 (best)

Gene MTA1, Length 2,144 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-208ENST00000438610 KRTAP4-1Q9BYQ7 146 aa9.43□□□□□ -0.9
MTA1-208ENST00000438610 PSPHP1O15172 72 aa9.42□□□□□ -0.9
MTA1-208ENST00000438610 H3BS24 57 aa9.4□□□□□ -0.9
MTA1-208ENST00000438610 SPTSSBQ8NFR3 76 aa9.4□□□□□ -0.9
MTA1-208ENST00000438610 RBM12B-AS1Q9P1G2 102 aa9.4□□□□□ -0.9
MTA1-208ENST00000438610 PRR15LQ9BU68 103 aa9.4□□□□□ -0.91
MTA1-208ENST00000438610 Q5VV11 94 aa9.34□□□□□ -0.91
MTA1-208ENST00000438610 H1FX-AS1Q4G0G2 97 aa9.31□□□□□ -0.92
MTA1-208ENST00000438610 A0A1B0GU69 56 aa9.26□□□□□ -0.93
MTA1-208ENST00000438610 MUC2Q02817 5179 aa9.22□□□□□ -0.93
MTA1-208ENST00000438610 S4R3F8 94 aa9.22□□□□□ -0.93
MTA1-208ENST00000438610 KRTAP19-2Q3LHN2 52 aa9.19□□□□□ -0.94
MTA1-208ENST00000438610 LCA10Q71F78 164 aa9.19□□□□□ -0.94
MTA1-208ENST00000438610 UBR4Q5T4S7 5183 aa9.17□□□□□ -0.94
MTA1-208ENST00000438610 BRK1Q8WUW1 75 aa9.17□□□□□ -0.94
MTA1-208ENST00000438610 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
MTA1-208ENST00000438610 A6NED7 52 aa9.15□□□□□ -0.94
MTA1-208ENST00000438610 RNF213Q63HN8 5207 aa9.14□□□□□ -0.95
MTA1-208ENST00000438610 PRO0628Q9UI54 55 aa9.07□□□□□ -0.96
MTA1-208ENST00000438610 FLGP20930 4061 aaPredicted RBP9.06□□□□□ -0.96
MTA1-208ENST00000438610 CSAG1Q6PB30 78 aa9.04□□□□□ -0.96
MTA1-208ENST00000438610 UQCR11O14957 56 aa9.02□□□□□ -0.96
MTA1-208ENST00000438610 CDC42SE1Q9NRR8 79 aa9.02□□□□□ -0.96
MTA1-208ENST00000438610 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
MTA1-208ENST00000438610 A8MU10 97 aa8.93□□□□□ -0.98
MTA1-208ENST00000438610 SPATA8Q6RVD6 105 aa8.93□□□□□ -0.98
MTA1-208ENST00000438610 A0A1B0GU33 70 aa8.93□□□□□ -0.98
MTA1-208ENST00000438610 MIR22HGQ0VDD5 57 aa8.93□□□□□ -0.98
MTA1-208ENST00000438610 KRTAP10-6P60371 365 aaPredicted RBP8.88□□□□□ -0.99
MTA1-208ENST00000438610 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
MTA1-208ENST00000438610 FAT4Q6V0I7 4981 aa8.85□□□□□ -0.99
MTA1-208ENST00000438610 H0YAA0 97 aa8.84□□□□□ -0.99
MTA1-208ENST00000438610 ADM2Q7Z4H4 148 aa8.82□□□□□ -1
MTA1-208ENST00000438610 MT1HP80294 61 aa8.8□□□□□ -1
MTA1-208ENST00000438610 P0C880 135 aa8.78□□□□□ -1
MTA1-208ENST00000438610 M0R2T5 61 aa8.71□□□□□ -1.01
MTA1-208ENST00000438610 PMAIP1Q13794 54 aa8.69□□□□□ -1.02
MTA1-208ENST00000438610 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.03
MTA1-208ENST00000438610 M0QZ58 72 aa8.62□□□□□ -1.03
MTA1-208ENST00000438610 A6NN06 94 aa8.6□□□□□ -1.03
MTA1-208ENST00000438610 K7ERS5 55 aa8.53□□□□□ -1.04
MTA1-208ENST00000438610 A0A0D9SG42 100 aa8.51□□□□□ -1.05
MTA1-208ENST00000438610 R4GN34 69 aa8.51□□□□□ -1.05
MTA1-208ENST00000438610 LORP23490 312 aaPredicted RBP8.5□□□□□ -1.05
MTA1-208ENST00000438610 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
MTA1-208ENST00000438610 KRTAP9-8Q9BYQ0 159 aa8.48□□□□□ -1.05
MTA1-208ENST00000438610 CRIPTQ9P021 101 aa8.48□□□□□ -1.05
MTA1-208ENST00000438610 MT2AP02795 61 aa8.44□□□□□ -1.06
MTA1-208ENST00000438610 LCE2DQ5TA82 110 aaPredicted RBP8.41□□□□□ -1.06
MTA1-208ENST00000438610 MT1FP04733 61 aa8.39□□□□□ -1.07
MTA1-208ENST00000438610 KRTAP10-10P60014 251 aa8.39□□□□□ -1.07
MTA1-208ENST00000438610 KTN1-AS1Q86SY8 53 aa8.38□□□□□ -1.07
MTA1-208ENST00000438610 KRTAP12-1P59990 96 aa8.35□□□□□ -1.07
MTA1-208ENST00000438610 LINC01554Q52M75 96 aa8.33□□□□□ -1.08
MTA1-208ENST00000438610 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
MTA1-208ENST00000438610 SPINT4Q6UDR6 99 aa8.32□□□□□ -1.08
MTA1-208ENST00000438610 SPRR2GQ9BYE4 73 aa8.29□□□□□ -1.08
MTA1-208ENST00000438610 KRTAP19-1Q8IUB9 90 aa8.25□□□□□ -1.09
MTA1-208ENST00000438610 KRTAP9-3Q9BYQ3 159 aa8.18□□□□□ -1.1
MTA1-208ENST00000438610 ROMO1P60602 79 aa8.17□□□□□ -1.1
MTA1-208ENST00000438610 PRAC1Q96KF2 57 aa8.08□□□□□ -1.12
MTA1-208ENST00000438610 KRTAP19-8Q3LI54 63 aa8.08□□□□□ -1.12
MTA1-208ENST00000438610 PLAC4Q8WY50 150 aa8□□□□□ -1.13
MTA1-208ENST00000438610 CAMK2N1Q7Z7J9 78 aa7.99□□□□□ -1.13
MTA1-208ENST00000438610 KRTAP23-1A1A580 65 aa7.97□□□□□ -1.13
MTA1-208ENST00000438610 LCE2BO14633 110 aa7.94□□□□□ -1.14
MTA1-208ENST00000438610 MT1BP07438 61 aa7.94□□□□□ -1.14
MTA1-208ENST00000438610 KRTAP25-1Q3LHN0 102 aa7.89□□□□□ -1.15
MTA1-208ENST00000438610 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
MTA1-208ENST00000438610 USH2AO75445 5202 aa7.76□□□□□ -1.17
MTA1-208ENST00000438610 MT1XP80297 61 aa7.68□□□□□ -1.18
MTA1-208ENST00000438610 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
MTA1-208ENST00000438610 TNP1P09430 55 aa7.64□□□□□ -1.19
MTA1-208ENST00000438610 PRO2289Q9P1D8 64 aa7.63□□□□□ -1.19
MTA1-208ENST00000438610 PP632Q6XCG6 107 aa7.54□□□□□ -1.2
MTA1-208ENST00000438610 SSPOA2VEC9 5147 aa7.51□□□□□ -1.21
MTA1-208ENST00000438610 KRTAP19-6Q3LI70 58 aa7.48□□□□□ -1.21
MTA1-208ENST00000438610 FSIP2Q5CZC0 6907 aa7.41□□□□□ -1.22
MTA1-208ENST00000438610 KRTAP9-2Q9BYQ4 174 aa7.41□□□□□ -1.22
MTA1-208ENST00000438610 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
MTA1-208ENST00000438610 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
MTA1-208ENST00000438610 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
MTA1-208ENST00000438610 LUZP6Q538Z0 58 aa7.22□□□□□ -1.25
MTA1-208ENST00000438610 FCGBPQ9Y6R7 5405 aaPredicted RBP7.2□□□□□ -1.26
MTA1-208ENST00000438610 CRCT1Q9UGL9 99 aa7.16□□□□□ -1.26
MTA1-208ENST00000438610 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
MTA1-208ENST00000438610 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
MTA1-208ENST00000438610 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
MTA1-208ENST00000438610 KMT2DO14686 5537 aa7.06□□□□□ -1.28
MTA1-208ENST00000438610 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
MTA1-208ENST00000438610 KRTAP12-3P60328 96 aa6.98□□□□□ -1.29
MTA1-208ENST00000438610 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
MTA1-208ENST00000438610 KRTAP19-7Q3SYF9 63 aa6.86□□□□□ -1.31
MTA1-208ENST00000438610 KRTAP9-6A0A140TA67 174 aa6.84□□□□□ -1.31
MTA1-208ENST00000438610 MACF1Q9UPN3 7388 aaKnown RBP6.83□□□□□ -1.32
MTA1-208ENST00000438610 MT1EP04732 61 aa6.74□□□□□ -1.33
MTA1-208ENST00000438610 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
MTA1-208ENST00000438610 SYNE2Q8WXH0 6885 aaKnown RBP6.62□□□□□ -1.35
MTA1-208ENST00000438610 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
MTA1-208ENST00000438610 SPRR2FQ96RM1 72 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms