RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 DOPEY2Q9Y3R5 2298 aa1.32□□□□□ -2.2
HMGB1P12-201ENST00000438594 TLN2Q9Y4G6 2542 aa1.31□□□□□ -2.2
HMGB1P12-201ENST00000438594 HERC1Q15751 4861 aa1.31□□□□□ -2.2
HMGB1P12-201ENST00000438594 H3BUA1 57 aa1.31□□□□□ -2.2
HMGB1P12-201ENST00000438594 DEFB130BP0DP73 79 aa1.31□□□□□ -2.2
HMGB1P12-201ENST00000438594 DEFB130AP0DP74 79 aa1.31□□□□□ -2.2
HMGB1P12-201ENST00000438594 SPRR1BP22528 89 aa1.31□□□□□ -2.2
HMGB1P12-201ENST00000438594 DEFB109BQ30KR1 87 aa1.31□□□□□ -2.2
HMGB1P12-201ENST00000438594 DEFB105AQ8NG35 78 aa1.31□□□□□ -2.2
HMGB1P12-201ENST00000438594 LEAP2Q969E1 77 aa1.31□□□□□ -2.2
HMGB1P12-201ENST00000438594 NBASA2RRP1 2371 aa1.31□□□□□ -2.2
HMGB1P12-201ENST00000438594 CELSR1Q9NYQ6 3014 aa1.3□□□□□ -2.2
HMGB1P12-201ENST00000438594 KRTAP21-3Q3LHN1 58 aa1.3□□□□□ -2.2
HMGB1P12-201ENST00000438594 KRTAP4-1Q9BYQ7 146 aa1.3□□□□□ -2.2
HMGB1P12-201ENST00000438594 FSIP2Q5CZC0 6907 aa1.3□□□□□ -2.2
HMGB1P12-201ENST00000438594 AKAP6Q13023 2319 aa1.3□□□□□ -2.2
HMGB1P12-201ENST00000438594 SPTBN1Q01082 2364 aaKnown RBP1.3□□□□□ -2.2
HMGB1P12-201ENST00000438594 CELSR2Q9HCU4 2923 aa1.29□□□□□ -2.2
HMGB1P12-201ENST00000438594 APCP25054 2843 aa1.28□□□□□ -2.2
HMGB1P12-201ENST00000438594 MEGF8Q7Z7M0 2845 aa1.28□□□□□ -2.2
HMGB1P12-201ENST00000438594 MXRA5Q9NR99 2828 aa1.28□□□□□ -2.2
HMGB1P12-201ENST00000438594 CRYBG3Q68DQ2 2970 aa1.28□□□□□ -2.2
HMGB1P12-201ENST00000438594 ANK2Q01484 3957 aa1.27□□□□□ -2.21
HMGB1P12-201ENST00000438594 STAB2Q8WWQ8 2551 aa1.27□□□□□ -2.21
HMGB1P12-201ENST00000438594 DSTQ03001 7570 aaKnown RBP1.27□□□□□ -2.21
HMGB1P12-201ENST00000438594 WNK2Q9Y3S1 2297 aa1.27□□□□□ -2.21
HMGB1P12-201ENST00000438594 CENPEQ02224 2701 aa1.26□□□□□ -2.21
HMGB1P12-201ENST00000438594 POLR2KP53803 58 aaKnown RBP1.26□□□□□ -2.21
HMGB1P12-201ENST00000438594 TACC2O95359 2948 aa1.26□□□□□ -2.21
HMGB1P12-201ENST00000438594 OTOGQ6ZRI0 2925 aa1.26□□□□□ -2.21
HMGB1P12-201ENST00000438594 DNAH3Q8TD57 4116 aa1.26□□□□□ -2.21
HMGB1P12-201ENST00000438594 DNAH1Q9P2D7 4330 aa1.26□□□□□ -2.21
HMGB1P12-201ENST00000438594 LRBAP50851 2863 aa1.26□□□□□ -2.21
HMGB1P12-201ENST00000438594 CSPG4Q6UVK1 2322 aa1.25□□□□□ -2.21
HMGB1P12-201ENST00000438594 NIPBLQ6KC79 2804 aaeCLIP1.25□□□□□ -2.21
HMGB1P12-201ENST00000438594 KRTAP12-3P60328 96 aa1.25□□□□□ -2.21
HMGB1P12-201ENST00000438594 KRTAP10-4P60372 401 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P12-201ENST00000438594 WFDC10BQ8IUB3 73 aa1.25□□□□□ -2.21
HMGB1P12-201ENST00000438594 TENM3Q9P273 2699 aa1.25□□□□□ -2.21
HMGB1P12-201ENST00000438594 FAT4Q6V0I7 4981 aa1.24□□□□□ -2.21
HMGB1P12-201ENST00000438594 MGAM2Q2M2H8 2515 aa1.24□□□□□ -2.21
HMGB1P12-201ENST00000438594 M0QY20 66 aa1.24□□□□□ -2.21
HMGB1P12-201ENST00000438594 TRRAPQ9Y4A5 3859 aa1.24□□□□□ -2.21
HMGB1P12-201ENST00000438594 ITPR2Q14571 2701 aa1.24□□□□□ -2.21
HMGB1P12-201ENST00000438594 APELAP0DMC3 54 aa1.23□□□□□ -2.21
HMGB1P12-201ENST00000438594 SSPOA2VEC9 5147 aa1.23□□□□□ -2.21
HMGB1P12-201ENST00000438594 HIVEP1P15822 2718 aa1.22□□□□□ -2.21
HMGB1P12-201ENST00000438594 IGLV5-48A0A075B6I7 105 aa1.22□□□□□ -2.21
HMGB1P12-201ENST00000438594 H3BUX3 64 aa1.22□□□□□ -2.21
HMGB1P12-201ENST00000438594 RPL39LQ96EH5 51 aaKnown RBP1.22□□□□□ -2.21
HMGB1P12-201ENST00000438594 RHPN1-AS1Q9BWJ2 59 aa1.22□□□□□ -2.21
HMGB1P12-201ENST00000438594 DEFB1P60022 68 aa1.21□□□□□ -2.22
HMGB1P12-201ENST00000438594 NF1P21359 2839 aa1.21□□□□□ -2.22
HMGB1P12-201ENST00000438594 ACANP16112 2415 aa1.2□□□□□ -2.22
HMGB1P12-201ENST00000438594 HMCN1Q96RW7 5635 aa1.2□□□□□ -2.22
HMGB1P12-201ENST00000438594 DMBT1Q9UGM3 2413 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P12-201ENST00000438594 CSMD3Q7Z407 3707 aa1.2□□□□□ -2.22
HMGB1P12-201ENST00000438594 DYNC2H1Q8NCM8 4307 aaKnown RBP1.19□□□□□ -2.22
HMGB1P12-201ENST00000438594 RPL39P62891 51 aaKnown RBP1.19□□□□□ -2.22
HMGB1P12-201ENST00000438594 LYSTQ99698 3801 aa1.19□□□□□ -2.22
HMGB1P12-201ENST00000438594 HUWE1Q7Z6Z7 4374 aaKnown RBP1.18□□□□□ -2.22
HMGB1P12-201ENST00000438594 HERC2O95714 4834 aa1.18□□□□□ -2.22
HMGB1P12-201ENST00000438594 MMP24-AS1A0A0U1RRL7 71 aa1.18□□□□□ -2.22
HMGB1P12-201ENST00000438594 DEFB136Q30KP8 78 aa1.18□□□□□ -2.22
HMGB1P12-201ENST00000438594 CMYA5Q8N3K9 4069 aa1.18□□□□□ -2.22
HMGB1P12-201ENST00000438594 WNK1Q9H4A3 2382 aa1.18□□□□□ -2.22
HMGB1P12-201ENST00000438594 MAP1AP78559 2803 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P12-201ENST00000438594 TGP01266 2768 aa1.17□□□□□ -2.22
HMGB1P12-201ENST00000438594 PRKDCP78527 4128 aaKnown RBP1.17□□□□□ -2.22
HMGB1P12-201ENST00000438594 H3BNG1 76 aa1.17□□□□□ -2.22
HMGB1P12-201ENST00000438594 S4R3F8 94 aa1.17□□□□□ -2.22
HMGB1P12-201ENST00000438594 F8P00451 2351 aa1.16□□□□□ -2.22
HMGB1P12-201ENST00000438594 DEFB131AP59861 70 aa1.16□□□□□ -2.22
HMGB1P12-201ENST00000438594 DNAH9Q9NYC9 4486 aa1.16□□□□□ -2.22
HMGB1P12-201ENST00000438594 KMT2DO14686 5537 aa1.15□□□□□ -2.23
HMGB1P12-201ENST00000438594 PRLHP81277 87 aa1.15□□□□□ -2.23
HMGB1P12-201ENST00000438594 DNAH7Q8WXX0 4024 aa1.15□□□□□ -2.23
HMGB1P12-201ENST00000438594 KRTAP20-1Q3LI63 56 aa1.14□□□□□ -2.23
HMGB1P12-201ENST00000438594 DNAH2Q9P225 4427 aa1.13□□□□□ -2.23
HMGB1P12-201ENST00000438594 FAT2Q9NYQ8 4349 aa1.13□□□□□ -2.23
HMGB1P12-201ENST00000438594 FCGBPQ9Y6R7 5405 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P12-201ENST00000438594 A0A096LPF7 62 aa1.12□□□□□ -2.23
HMGB1P12-201ENST00000438594 LINC01556Q5JQF7 62 aa1.12□□□□□ -2.23
HMGB1P12-201ENST00000438594 NOP10Q9NPE3 64 aaKnown RBP1.12□□□□□ -2.23
HMGB1P12-201ENST00000438594 DNAH10Q8IVF4 4471 aa1.12□□□□□ -2.23
HMGB1P12-201ENST00000438594 VPS13DQ5THJ4 4388 aa1.12□□□□□ -2.23
HMGB1P12-201ENST00000438594 DNAH6Q9C0G6 4158 aa1.11□□□□□ -2.23
HMGB1P12-201ENST00000438594 STARD9Q9P2P6 4700 aa1.11□□□□□ -2.23
HMGB1P12-201ENST00000438594 SMR3AQ99954 134 aa1.11□□□□□ -2.23
HMGB1P12-201ENST00000438594 PLECQ15149 4684 aaKnown RBP1.11□□□□□ -2.23
HMGB1P12-201ENST00000438594 COL7A1Q02388 2944 aa1.11□□□□□ -2.23
HMGB1P12-201ENST00000438594 KMT2AQ03164 3969 aa1.11□□□□□ -2.23
HMGB1P12-201ENST00000438594 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
HMGB1P12-201ENST00000438594 RNF213Q63HN8 5207 aa1.1□□□□□ -2.23
HMGB1P12-201ENST00000438594 DEFB135Q30KP9 77 aa1.1□□□□□ -2.23
HMGB1P12-201ENST00000438594 DNAH5Q8TE73 4624 aa1.1□□□□□ -2.23
HMGB1P12-201ENST00000438594 HECTD4Q9Y4D8 3996 aa1.1□□□□□ -2.23
HMGB1P12-201ENST00000438594 DNAH17Q9UFH2 4485 aa1.1□□□□□ -2.23
HMGB1P12-201ENST00000438594 DNAH8Q96JB1 4490 aa1.09□□□□□ -2.23
HMGB1P12-201ENST00000438594 HMCN2Q8NDA2 5059 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms