RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 BATFQ16520 125 aa3.43□□□□□ -1.86
RTN4-211ENST00000438462 A0A0D9SG42 100 aa3.41□□□□□ -1.86
RTN4-211ENST00000438462 A0A1B0GX51 115 aa3.41□□□□□ -1.86
RTN4-211ENST00000438462 C20orf197Q8N268 126 aa3.41□□□□□ -1.86
RTN4-211ENST00000438462 SYS1-DBNDD2H3BUS1 97 aa3.39□□□□□ -1.87
RTN4-211ENST00000438462 LINC01545Q5VT33 79 aa3.38□□□□□ -1.87
RTN4-211ENST00000438462 ORMDL1Q9P0S3 153 aa3.38□□□□□ -1.87
RTN4-211ENST00000438462 CXCL6P80162 114 aa3.37□□□□□ -1.87
RTN4-211ENST00000438462 MT-ATP8P03928 68 aa3.34□□□□□ -1.87
RTN4-211ENST00000438462 NDUFA5Q16718 116 aa3.34□□□□□ -1.87
RTN4-211ENST00000438462 TMEM256-PLSCR3K7ERE1 68 aa3.33□□□□□ -1.88
RTN4-211ENST00000438462 DNAL4O96015 105 aa3.32□□□□□ -1.88
RTN4-211ENST00000438462 S100A1P23297 94 aa3.32□□□□□ -1.88
RTN4-211ENST00000438462 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
RTN4-211ENST00000438462 HIST1H4GQ99525 98 aa3.31□□□□□ -1.88
RTN4-211ENST00000438462 H3BQ85 93 aa3.3□□□□□ -1.88
RTN4-211ENST00000438462 C10orf95Q9H7T3 257 aa3.3□□□□□ -1.88
RTN4-211ENST00000438462 TMEM218A2RU14 115 aa3.29□□□□□ -1.88
RTN4-211ENST00000438462 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
RTN4-211ENST00000438462 UBE2V1Q13404 147 aa3.28□□□□□ -1.88
RTN4-211ENST00000438462 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
RTN4-211ENST00000438462 PET117Q6UWS5 81 aa3.27□□□□□ -1.89
RTN4-211ENST00000438462 CASC2Q6XLA1 102 aa3.27□□□□□ -1.89
RTN4-211ENST00000438462 C9JAW5 83 aa3.26□□□□□ -1.89
RTN4-211ENST00000438462 K7EP34 96 aa3.26□□□□□ -1.89
RTN4-211ENST00000438462 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
RTN4-211ENST00000438462 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
RTN4-211ENST00000438462 COA6Q5JTJ3 125 aaKnown RBP3.24□□□□□ -1.89
RTN4-211ENST00000438462 MT3P25713 68 aa3.22□□□□□ -1.89
RTN4-211ENST00000438462 ATOH7Q8N100 152 aa3.21□□□□□ -1.9
RTN4-211ENST00000438462 NAA38Q9BRA0 125 aaKnown RBP3.21□□□□□ -1.9
RTN4-211ENST00000438462 NREPQ16612 68 aa3.2□□□□□ -1.9
RTN4-211ENST00000438462 CLLU1Q5K131 121 aa3.2□□□□□ -1.9
RTN4-211ENST00000438462 MT1AP04731 61 aa3.17□□□□□ -1.9
RTN4-211ENST00000438462 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
RTN4-211ENST00000438462 A0A1B0GW54 56 aa3.16□□□□□ -1.9
RTN4-211ENST00000438462 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
RTN4-211ENST00000438462 A0A0B4J2C4 111 aa3.14□□□□□ -1.91
RTN4-211ENST00000438462 Q8N9L7 120 aa3.14□□□□□ -1.91
RTN4-211ENST00000438462 CYP4F30PQ9H0H9 118 aa3.14□□□□□ -1.91
RTN4-211ENST00000438462 APOC3P02656 99 aa3.13□□□□□ -1.91
RTN4-211ENST00000438462 LOC105371267A0A1B0GV96 52 aa3.12□□□□□ -1.91
RTN4-211ENST00000438462 KRTDAPP60985 99 aa3.12□□□□□ -1.91
RTN4-211ENST00000438462 SNAPINO95295 136 aa3.11□□□□□ -1.91
RTN4-211ENST00000438462 SVBPQ8N300 66 aa3.11□□□□□ -1.91
RTN4-211ENST00000438462 ACYP1P07311 99 aa3.09□□□□□ -1.91
RTN4-211ENST00000438462 CEND1Q8N111 149 aa3.09□□□□□ -1.91
RTN4-211ENST00000438462 SNRPEP62304 92 aaKnown RBP3.07□□□□□ -1.92
RTN4-211ENST00000438462 S100A6P06703 90 aa3.06□□□□□ -1.92
RTN4-211ENST00000438462 LOC110117498A0A087WWA1 95 aa3.05□□□□□ -1.92
RTN4-211ENST00000438462 BPY2O14599 106 aa3.05□□□□□ -1.92
RTN4-211ENST00000438462 PCP4L1A6NKN8 68 aa3.03□□□□□ -1.92
RTN4-211ENST00000438462 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
RTN4-211ENST00000438462 PRO1854Q9UHT4 67 aa3.03□□□□□ -1.92
RTN4-211ENST00000438462 SMIM6P0DI80 62 aa3□□□□□ -1.93
RTN4-211ENST00000438462 S100A2P29034 98 aa3□□□□□ -1.93
RTN4-211ENST00000438462 PSMB2P49721 201 aa2.98□□□□□ -1.93
RTN4-211ENST00000438462 TRAV22A0A0B4J277 110 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 HIST1H2BKO60814 126 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 HIST1H2BJP06899 126 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 HIST1H2BOP23527 126 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 HIST1H2BBP33778 126 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 HIST1H2BDP58876 126 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 HIST1H2BCP62807 126 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 HIST2H2BEQ16778 126 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.96□□□□□ -1.94
RTN4-211ENST00000438462 HIST1H2BHQ93079 126 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 HIST1H2BNQ99877 126 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 HIST1H2BMQ99879 126 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 TP53AIP1Q9HCN2 124 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 C14orf132Q9NPU4 83 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 HIGD1BQ9P298 99 aa2.96□□□□□ -1.94
RTN4-211ENST00000438462 BAALC-AS2P0C853 105 aa2.95□□□□□ -1.94
RTN4-211ENST00000438462 TSTD3H0UI37 97 aa2.94□□□□□ -1.94
RTN4-211ENST00000438462 JMJD7-PLA2G4BH0Y9G9 81 aa2.94□□□□□ -1.94
RTN4-211ENST00000438462 HIST3H2BBQ8N257 126 aa2.94□□□□□ -1.94
RTN4-211ENST00000438462 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
RTN4-211ENST00000438462 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
RTN4-211ENST00000438462 LOC101927531A0A1B0GV80 90 aa2.92□□□□□ -1.94
RTN4-211ENST00000438462 COX6CP09669 75 aa2.91□□□□□ -1.94
RTN4-211ENST00000438462 PYY3Q5JQD4 70 aa2.91□□□□□ -1.94
RTN4-211ENST00000438462 HIST1H2BLQ99880 126 aa2.91□□□□□ -1.94
RTN4-211ENST00000438462 HSBP1L1C9JCN9 74 aa2.88□□□□□ -1.95
RTN4-211ENST00000438462 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
RTN4-211ENST00000438462 C14orf144Q96I85 54 aa2.87□□□□□ -1.95
RTN4-211ENST00000438462 VAMP8Q9BV40 100 aa2.87□□□□□ -1.95
RTN4-211ENST00000438462 M0R143 59 aa2.86□□□□□ -1.95
RTN4-211ENST00000438462 A0A1B0GV90 55 aa2.85□□□□□ -1.95
RTN4-211ENST00000438462 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
RTN4-211ENST00000438462 KRTAP13-4Q3LI77 160 aa2.84□□□□□ -1.95
RTN4-211ENST00000438462 SPATA45Q537H7 98 aa2.84□□□□□ -1.95
RTN4-211ENST00000438462 FXYD2P54710 66 aa2.83□□□□□ -1.96
RTN4-211ENST00000438462 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
RTN4-211ENST00000438462 UQCR10Q9UDW1 63 aa2.83□□□□□ -1.96
RTN4-211ENST00000438462 K7ERJ3 54 aa2.81□□□□□ -1.96
RTN4-211ENST00000438462 COL5A1-AS1Q5SY13 56 aa2.81□□□□□ -1.96
RTN4-211ENST00000438462 COX8AP10176 69 aa2.8□□□□□ -1.96
RTN4-211ENST00000438462 DLEU1O43261 78 aa2.78□□□□□ -1.96
RTN4-211ENST00000438462 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
RTN4-211ENST00000438462 SCGB1C2P0DMR2 95 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms