RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 FAM236AA0A1B0GUQ0 79 aa6.41□□□□□ -1.38
TNFRSF1A-203ENST00000437813 FAM236BA0A1B0GV22 79 aa6.41□□□□□ -1.38
TNFRSF1A-203ENST00000437813 CSAG1Q6PB30 78 aa6.41□□□□□ -1.38
TNFRSF1A-203ENST00000437813 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
TNFRSF1A-203ENST00000437813 UBL5Q9BZL1 73 aa6.39□□□□□ -1.39
TNFRSF1A-203ENST00000437813 KLKP1Q107X0 134 aa6.37□□□□□ -1.39
TNFRSF1A-203ENST00000437813 GTF2H5Q6ZYL4 71 aa6.37□□□□□ -1.39
TNFRSF1A-203ENST00000437813 KRTAP5-9P26371 169 aa6.35□□□□□ -1.39
TNFRSF1A-203ENST00000437813 MUC12Q9UKN1 5478 aa6.34□□□□□ -1.39
TNFRSF1A-203ENST00000437813 TP53AIP1Q9HCN2 124 aa6.34□□□□□ -1.39
TNFRSF1A-203ENST00000437813 K7EP34 96 aa6.33□□□□□ -1.4
TNFRSF1A-203ENST00000437813 KRTAP4-9Q9BYQ8 210 aa6.32□□□□□ -1.4
TNFRSF1A-203ENST00000437813 A0A087WVE0 104 aa6.31□□□□□ -1.4
TNFRSF1A-203ENST00000437813 CYP4F30PQ9H0H9 118 aa6.3□□□□□ -1.4
TNFRSF1A-203ENST00000437813 KMT2DO14686 5537 aa6.27□□□□□ -1.41
TNFRSF1A-203ENST00000437813 F8W1H4 67 aa6.26□□□□□ -1.41
TNFRSF1A-203ENST00000437813 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
TNFRSF1A-203ENST00000437813 KRTAP20-1Q3LI63 56 aa6.22□□□□□ -1.41
TNFRSF1A-203ENST00000437813 LCE5AQ5TCM9 118 aa6.21□□□□□ -1.42
TNFRSF1A-203ENST00000437813 TRAV22A0A0B4J277 110 aa6.19□□□□□ -1.42
TNFRSF1A-203ENST00000437813 H0YAA0 97 aa6.19□□□□□ -1.42
TNFRSF1A-203ENST00000437813 ETDBQ3ZM63 59 aa6.19□□□□□ -1.42
TNFRSF1A-203ENST00000437813 MDN1Q9NU22 5596 aa6.19□□□□□ -1.42
TNFRSF1A-203ENST00000437813 LOC101927531A0A1B0GV80 90 aa6.18□□□□□ -1.42
TNFRSF1A-203ENST00000437813 K7ERU9 68 aa6.18□□□□□ -1.42
TNFRSF1A-203ENST00000437813 IMUPQ9GZP8 106 aa6.16□□□□□ -1.42
TNFRSF1A-203ENST00000437813 J3QR89 54 aa6.14□□□□□ -1.43
TNFRSF1A-203ENST00000437813 KRTAP4-11Q9BYQ6 195 aa6.13□□□□□ -1.43
TNFRSF1A-203ENST00000437813 KRTAP4-2Q9BYR5 136 aa6.11□□□□□ -1.43
TNFRSF1A-203ENST00000437813 MT1XP80297 61 aa6.1□□□□□ -1.43
TNFRSF1A-203ENST00000437813 NDUFC1O43677 76 aa6.08□□□□□ -1.44
TNFRSF1A-203ENST00000437813 UQCRQO14949 82 aa6.07□□□□□ -1.44
TNFRSF1A-203ENST00000437813 FAM240AA0A1B0GVK7 77 aa6.05□□□□□ -1.44
TNFRSF1A-203ENST00000437813 H0Y9P7 68 aa6.05□□□□□ -1.44
TNFRSF1A-203ENST00000437813 ATOX1O00244 68 aa6.04□□□□□ -1.44
TNFRSF1A-203ENST00000437813 ACYP1P07311 99 aa6.04□□□□□ -1.44
TNFRSF1A-203ENST00000437813 ATP5EP2Q5VTU8 51 aa6.04□□□□□ -1.44
TNFRSF1A-203ENST00000437813 ADM2Q7Z4H4 148 aa6.04□□□□□ -1.44
TNFRSF1A-203ENST00000437813 A8MUN3 132 aa6.03□□□□□ -1.44
TNFRSF1A-203ENST00000437813 KRTAP2-3P0C7H8 128 aa6.03□□□□□ -1.44
TNFRSF1A-203ENST00000437813 KRTAP2-4Q9BYR9 128 aa6.03□□□□□ -1.44
TNFRSF1A-203ENST00000437813 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
TNFRSF1A-203ENST00000437813 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
TNFRSF1A-203ENST00000437813 KRTAP12-2P59991 146 aa5.98□□□□□ -1.45
TNFRSF1A-203ENST00000437813 HIST1H4AP62805 103 aaKnown RBP5.98□□□□□ -1.45
TNFRSF1A-203ENST00000437813 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
TNFRSF1A-203ENST00000437813 SPRR2EP22531 72 aa5.96□□□□□ -1.46
TNFRSF1A-203ENST00000437813 SPRR2BP35325 72 aa5.96□□□□□ -1.46
TNFRSF1A-203ENST00000437813 SPRR2AP35326 72 aa5.96□□□□□ -1.46
TNFRSF1A-203ENST00000437813 LCE1AQ5T7P2 110 aa5.95□□□□□ -1.46
TNFRSF1A-203ENST00000437813 P0C880 135 aa5.94□□□□□ -1.46
TNFRSF1A-203ENST00000437813 LINC00208Q96KT6 92 aa5.94□□□□□ -1.46
TNFRSF1A-203ENST00000437813 OCR1Q9BZK8 76 aa5.94□□□□□ -1.46
TNFRSF1A-203ENST00000437813 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
TNFRSF1A-203ENST00000437813 SCGB1A1P11684 91 aa5.91□□□□□ -1.46
TNFRSF1A-203ENST00000437813 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
TNFRSF1A-203ENST00000437813 LINC00643Q86TS7 51 aa5.9□□□□□ -1.46
TNFRSF1A-203ENST00000437813 R4GN34 69 aa5.87□□□□□ -1.47
TNFRSF1A-203ENST00000437813 SVIPQ8NHG7 77 aa5.84□□□□□ -1.47
TNFRSF1A-203ENST00000437813 DMAC1Q96GE9 116 aa5.84□□□□□ -1.47
TNFRSF1A-203ENST00000437813 M0QZ58 72 aa5.83□□□□□ -1.48
TNFRSF1A-203ENST00000437813 MT-ATP8P03928 68 aa5.83□□□□□ -1.48
TNFRSF1A-203ENST00000437813 MP68P56378 58 aa5.83□□□□□ -1.48
TNFRSF1A-203ENST00000437813 C20orf197Q8N268 126 aa5.82□□□□□ -1.48
TNFRSF1A-203ENST00000437813 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
TNFRSF1A-203ENST00000437813 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
TNFRSF1A-203ENST00000437813 PCP4P48539 62 aa5.8□□□□□ -1.48
TNFRSF1A-203ENST00000437813 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
TNFRSF1A-203ENST00000437813 KRTAP10-12P60413 245 aa5.79□□□□□ -1.48
TNFRSF1A-203ENST00000437813 H3BPC8 53 aa5.78□□□□□ -1.48
TNFRSF1A-203ENST00000437813 SPRR2DP22532 72 aa5.76□□□□□ -1.49
TNFRSF1A-203ENST00000437813 LINC01554Q52M75 96 aa5.72□□□□□ -1.49
TNFRSF1A-203ENST00000437813 TRAV7A0A075B6U4 112 aa5.67□□□□□ -1.5
TNFRSF1A-203ENST00000437813 ANAPC13Q9BS18 74 aa5.65□□□□□ -1.5
TNFRSF1A-203ENST00000437813 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
TNFRSF1A-203ENST00000437813 SMIM20Q8N5G0 67 aa5.59□□□□□ -1.51
TNFRSF1A-203ENST00000437813 ACYP2P14621 99 aa5.58□□□□□ -1.52
TNFRSF1A-203ENST00000437813 COX7CP15954 63 aa5.55□□□□□ -1.52
TNFRSF1A-203ENST00000437813 SERP2Q8N6R1 65 aa5.55□□□□□ -1.52
TNFRSF1A-203ENST00000437813 SPTSSBQ8NFR3 76 aa5.51□□□□□ -1.53
TNFRSF1A-203ENST00000437813 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
TNFRSF1A-203ENST00000437813 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
TNFRSF1A-203ENST00000437813 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
TNFRSF1A-203ENST00000437813 CHKB-CPT1BH3BT56 60 aa5.41□□□□□ -1.54
TNFRSF1A-203ENST00000437813 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
TNFRSF1A-203ENST00000437813 MT1EP04732 61 aa5.4□□□□□ -1.54
TNFRSF1A-203ENST00000437813 TMEM258P61165 79 aa5.37□□□□□ -1.55
TNFRSF1A-203ENST00000437813 KRTAP19-3Q7Z4W3 81 aa5.37□□□□□ -1.55
TNFRSF1A-203ENST00000437813 SPANXA2-OT1Q8N9U9 137 aa5.37□□□□□ -1.55
TNFRSF1A-203ENST00000437813 SNURFQ9Y675 71 aa5.37□□□□□ -1.55
TNFRSF1A-203ENST00000437813 CAMK2N1Q7Z7J9 78 aa5.33□□□□□ -1.56
TNFRSF1A-203ENST00000437813 H7BZZ5 65 aa5.32□□□□□ -1.56
TNFRSF1A-203ENST00000437813 ATP5EP56381 51 aaPredicted RBP5.31□□□□□ -1.56
TNFRSF1A-203ENST00000437813 CYSTM1Q9H1C7 97 aa5.31□□□□□ -1.56
TNFRSF1A-203ENST00000437813 RPS28P62857 69 aaKnown RBP5.3□□□□□ -1.56
TNFRSF1A-203ENST00000437813 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
TNFRSF1A-203ENST00000437813 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
TNFRSF1A-203ENST00000437813 MT1GP13640 62 aa5.22□□□□□ -1.57
TNFRSF1A-203ENST00000437813 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
TNFRSF1A-203ENST00000437813 A0A0D9SG42 100 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms