RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 A0A1B0GVX0 72 aa6.65□□□□□ -1.34
SMIM12-203ENST00000426886 CASC2Q6XLA1 102 aa6.63□□□□□ -1.35
SMIM12-203ENST00000426886 C20orf166-AS1Q96NR2 134 aa6.63□□□□□ -1.35
SMIM12-203ENST00000426886 SPINK7P58062 85 aa6.62□□□□□ -1.35
SMIM12-203ENST00000426886 A8MUU9 505 aa6.62□□□□□ -1.35
SMIM12-203ENST00000426886 KRTAP16-1A8MUX0 517 aa6.62□□□□□ -1.35
SMIM12-203ENST00000426886 A8MWP4 228 aa6.61□□□□□ -1.35
SMIM12-203ENST00000426886 C8orf17Q9NRJ1 99 aa6.57□□□□□ -1.36
SMIM12-203ENST00000426886 PRAC1Q96KF2 57 aa6.55□□□□□ -1.36
SMIM12-203ENST00000426886 LINC01554Q52M75 96 aa6.53□□□□□ -1.36
SMIM12-203ENST00000426886 HRES1P13985 223 aa6.51□□□□□ -1.37
SMIM12-203ENST00000426886 MMP24-AS1A0A0U1RRL7 71 aa6.51□□□□□ -1.37
SMIM12-203ENST00000426886 KRTAP19-2Q3LHN2 52 aa6.5□□□□□ -1.37
SMIM12-203ENST00000426886 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
SMIM12-203ENST00000426886 ADM2Q7Z4H4 148 aa6.5□□□□□ -1.37
SMIM12-203ENST00000426886 LCE2CQ5TA81 110 aa6.49□□□□□ -1.37
SMIM12-203ENST00000426886 COX6B2Q6YFQ2 88 aa6.49□□□□□ -1.37
SMIM12-203ENST00000426886 TP53AIP1Q9HCN2 124 aa6.47□□□□□ -1.37
SMIM12-203ENST00000426886 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.37
SMIM12-203ENST00000426886 MT1HP80294 61 aa6.41□□□□□ -1.38
SMIM12-203ENST00000426886 A0A0A0MQY5 61 aa6.4□□□□□ -1.39
SMIM12-203ENST00000426886 M0R2T5 61 aa6.38□□□□□ -1.39
SMIM12-203ENST00000426886 SPATA8Q6RVD6 105 aa6.37□□□□□ -1.39
SMIM12-203ENST00000426886 FLGP20930 4061 aaPredicted RBP6.35□□□□□ -1.39
SMIM12-203ENST00000426886 Q5W150 140 aa6.35□□□□□ -1.39
SMIM12-203ENST00000426886 ACYP2P14621 99 aa6.32□□□□□ -1.4
SMIM12-203ENST00000426886 IGKV2D-30A0A075B6S6 120 aa6.31□□□□□ -1.4
SMIM12-203ENST00000426886 IGKV2-30P06310 120 aa6.31□□□□□ -1.4
SMIM12-203ENST00000426886 CSAG1Q6PB30 78 aa6.3□□□□□ -1.4
SMIM12-203ENST00000426886 A0A1B0GU69 56 aa6.3□□□□□ -1.4
SMIM12-203ENST00000426886 MIR22HGQ0VDD5 57 aa6.29□□□□□ -1.4
SMIM12-203ENST00000426886 UQCR11O14957 56 aa6.27□□□□□ -1.41
SMIM12-203ENST00000426886 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
SMIM12-203ENST00000426886 DMAC1Q96GE9 116 aa6.25□□□□□ -1.41
SMIM12-203ENST00000426886 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
SMIM12-203ENST00000426886 KRTAP9-2Q9BYQ4 174 aa6.19□□□□□ -1.42
SMIM12-203ENST00000426886 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
SMIM12-203ENST00000426886 ROMO1P60602 79 aa6.12□□□□□ -1.43
SMIM12-203ENST00000426886 H1FX-AS1Q4G0G2 97 aa6.12□□□□□ -1.43
SMIM12-203ENST00000426886 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.43
SMIM12-203ENST00000426886 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.44
SMIM12-203ENST00000426886 LCE2DQ5TA82 110 aaPredicted RBP6.06□□□□□ -1.44
SMIM12-203ENST00000426886 KRTAP3-1Q9BYR8 98 aa6.06□□□□□ -1.44
SMIM12-203ENST00000426886 MT2AP02795 61 aa6.03□□□□□ -1.44
SMIM12-203ENST00000426886 KRTAP10-10P60014 251 aa6.01□□□□□ -1.45
SMIM12-203ENST00000426886 MT1FP04733 61 aa6□□□□□ -1.45
SMIM12-203ENST00000426886 S4R3F8 94 aa5.96□□□□□ -1.45
SMIM12-203ENST00000426886 H0YAA0 97 aa5.95□□□□□ -1.46
SMIM12-203ENST00000426886 P0C880 135 aa5.95□□□□□ -1.46
SMIM12-203ENST00000426886 USH2AO75445 5202 aa5.91□□□□□ -1.46
SMIM12-203ENST00000426886 KRTAP9-6A0A140TA67 174 aa5.9□□□□□ -1.47
SMIM12-203ENST00000426886 KRTAP9-3Q9BYQ3 159 aa5.89□□□□□ -1.47
SMIM12-203ENST00000426886 CRCT1Q9UGL9 99 aa5.88□□□□□ -1.47
SMIM12-203ENST00000426886 KRTAP3-3Q9BYR6 98 aa5.86□□□□□ -1.47
SMIM12-203ENST00000426886 LCE2BO14633 110 aa5.84□□□□□ -1.47
SMIM12-203ENST00000426886 A0A1B0GU33 70 aa5.84□□□□□ -1.47
SMIM12-203ENST00000426886 CRIPTQ9P021 101 aa5.83□□□□□ -1.48
SMIM12-203ENST00000426886 SSPOA2VEC9 5147 aa5.82□□□□□ -1.48
SMIM12-203ENST00000426886 K7ERS5 55 aa5.76□□□□□ -1.49
SMIM12-203ENST00000426886 SPINT4Q6UDR6 99 aa5.73□□□□□ -1.49
SMIM12-203ENST00000426886 NDUFAF8A1L188 74 aa5.69□□□□□ -1.5
SMIM12-203ENST00000426886 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
SMIM12-203ENST00000426886 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
SMIM12-203ENST00000426886 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
SMIM12-203ENST00000426886 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
SMIM12-203ENST00000426886 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
SMIM12-203ENST00000426886 KRTAP19-6Q3LI70 58 aa5.55□□□□□ -1.52
SMIM12-203ENST00000426886 MT1BP07438 61 aa5.54□□□□□ -1.52
SMIM12-203ENST00000426886 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
SMIM12-203ENST00000426886 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
SMIM12-203ENST00000426886 KRTAP3-2Q9BYR7 98 aa5.52□□□□□ -1.53
SMIM12-203ENST00000426886 R4GN34 69 aa5.5□□□□□ -1.53
SMIM12-203ENST00000426886 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
SMIM12-203ENST00000426886 MACF1Q9UPN3 7388 aaKnown RBP5.5□□□□□ -1.53
SMIM12-203ENST00000426886 M0QZ58 72 aa5.47□□□□□ -1.53
SMIM12-203ENST00000426886 A0A0D9SG42 100 aa5.47□□□□□ -1.53
SMIM12-203ENST00000426886 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.45□□□□□ -1.54
SMIM12-203ENST00000426886 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
SMIM12-203ENST00000426886 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
SMIM12-203ENST00000426886 PLAC4Q8WY50 150 aa5.36□□□□□ -1.55
SMIM12-203ENST00000426886 KRTAP10-5P60370 271 aa5.35□□□□□ -1.55
SMIM12-203ENST00000426886 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
SMIM12-203ENST00000426886 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
SMIM12-203ENST00000426886 MT1XP80297 61 aa5.25□□□□□ -1.57
SMIM12-203ENST00000426886 PRO2289Q9P1D8 64 aa5.24□□□□□ -1.57
SMIM12-203ENST00000426886 KMT2DO14686 5537 aa5.22□□□□□ -1.57
SMIM12-203ENST00000426886 KRTAP6-3Q3LI67 103 aa5.13□□□□□ -1.59
SMIM12-203ENST00000426886 MUC12Q9UKN1 5478 aa5.12□□□□□ -1.59
SMIM12-203ENST00000426886 CAMK2N1Q7Z7J9 78 aa5.1□□□□□ -1.59
SMIM12-203ENST00000426886 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
SMIM12-203ENST00000426886 KRTAP4-8A0A0G2JLE6 195 aa5.03□□□□□ -1.6
SMIM12-203ENST00000426886 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
SMIM12-203ENST00000426886 MDN1Q9NU22 5596 aa5.01□□□□□ -1.61
SMIM12-203ENST00000426886 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
SMIM12-203ENST00000426886 KRTAP5-9P26371 169 aa4.97□□□□□ -1.61
SMIM12-203ENST00000426886 KRTAP10-12P60413 245 aa4.96□□□□□ -1.62
SMIM12-203ENST00000426886 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
SMIM12-203ENST00000426886 NEBP20929 6669 aa4.95□□□□□ -1.62
SMIM12-203ENST00000426886 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
SMIM12-203ENST00000426886 SPRR2EP22531 72 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms