RNA–Protein interactions for RNA: ENST00000425695.5

HTATSF1-202, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 3

Gene HTATSF1, Length 885 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-202ENST00000425695 LINC00208Q96KT6 92 aa11.59□□□□□ -0.55
HTATSF1-202ENST00000425695 MP68P56378 58 aa11.57□□□□□ -0.56
HTATSF1-202ENST00000425695 KRTAP19-1Q8IUB9 90 aa11.55□□□□□ -0.56
HTATSF1-202ENST00000425695 KRTAP3-3Q9BYR6 98 aa11.53□□□□□ -0.56
HTATSF1-202ENST00000425695 H3BPC8 53 aa11.51□□□□□ -0.57
HTATSF1-202ENST00000425695 SERP2Q8N6R1 65 aa11.5□□□□□ -0.57
HTATSF1-202ENST00000425695 KLKP1Q107X0 134 aa11.49□□□□□ -0.57
HTATSF1-202ENST00000425695 FCGBPQ9Y6R7 5405 aaPredicted RBP11.38□□□□□ -0.59
HTATSF1-202ENST00000425695 COX7CP15954 63 aa11.37□□□□□ -0.59
HTATSF1-202ENST00000425695 ANAPC13Q9BS18 74 aa11.37□□□□□ -0.59
HTATSF1-202ENST00000425695 A8MUN3 132 aa11.35□□□□□ -0.59
HTATSF1-202ENST00000425695 NDUFC1O43677 76 aa11.35□□□□□ -0.59
HTATSF1-202ENST00000425695 KRTAP19-6Q3LI70 58 aa11.35□□□□□ -0.59
HTATSF1-202ENST00000425695 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.33□□□□□ -0.6
HTATSF1-202ENST00000425695 C20orf197Q8N268 126 aa11.31□□□□□ -0.6
HTATSF1-202ENST00000425695 SNURFQ9Y675 71 aa11.27□□□□□ -0.61
HTATSF1-202ENST00000425695 SPRR2GQ9BYE4 73 aa11.23□□□□□ -0.61
HTATSF1-202ENST00000425695 Q5VV11 94 aa11.15□□□□□ -0.62
HTATSF1-202ENST00000425695 MT1BP07438 61 aa11.14□□□□□ -0.63
HTATSF1-202ENST00000425695 KRTAP9-7A8MTY7 169 aa11.13□□□□□ -0.63
HTATSF1-202ENST00000425695 KRTAP19-8Q3LI54 63 aa11.13□□□□□ -0.63
HTATSF1-202ENST00000425695 DMAC1Q96GE9 116 aa11.13□□□□□ -0.63
HTATSF1-202ENST00000425695 H0YAA0 97 aa11.12□□□□□ -0.63
HTATSF1-202ENST00000425695 ADM2Q7Z4H4 148 aa11.11□□□□□ -0.63
HTATSF1-202ENST00000425695 CRIPTQ9P021 101 aa11.11□□□□□ -0.63
HTATSF1-202ENST00000425695 CCDC179H3BU77 68 aa11.1□□□□□ -0.63
HTATSF1-202ENST00000425695 SPANXA2-OT1Q8N9U9 137 aa11.04□□□□□ -0.64
HTATSF1-202ENST00000425695 CYSTM1Q9H1C7 97 aa11.02□□□□□ -0.65
HTATSF1-202ENST00000425695 H7BZZ5 65 aa11□□□□□ -0.65
HTATSF1-202ENST00000425695 A6NN06 94 aa10.95□□□□□ -0.66
HTATSF1-202ENST00000425695 ACYP2P14621 99 aa10.93□□□□□ -0.66
HTATSF1-202ENST00000425695 P0C880 135 aa10.88□□□□□ -0.67
HTATSF1-202ENST00000425695 MACF1Q9UPN3 7388 aaKnown RBP10.87□□□□□ -0.67
HTATSF1-202ENST00000425695 PCP4P48539 62 aa10.86□□□□□ -0.67
HTATSF1-202ENST00000425695 KRTAP10-5P60370 271 aa10.83□□□□□ -0.68
HTATSF1-202ENST00000425695 KRTAP3-2Q9BYR7 98 aa10.8□□□□□ -0.68
HTATSF1-202ENST00000425695 R4GN34 69 aa10.78□□□□□ -0.68
HTATSF1-202ENST00000425695 ATP5EP56381 51 aaPredicted RBP10.77□□□□□ -0.69
HTATSF1-202ENST00000425695 TMEM258P61165 79 aa10.76□□□□□ -0.69
HTATSF1-202ENST00000425695 CHKB-CPT1BH3BT56 60 aa10.75□□□□□ -0.69
HTATSF1-202ENST00000425695 SPTSSBQ8NFR3 76 aa10.74□□□□□ -0.69
HTATSF1-202ENST00000425695 M0QZ58 72 aa10.73□□□□□ -0.69
HTATSF1-202ENST00000425695 SYNE2Q8WXH0 6885 aaKnown RBP10.7□□□□□ -0.7
HTATSF1-202ENST00000425695 COA5Q86WW8 74 aa10.67□□□□□ -0.7
HTATSF1-202ENST00000425695 KRTAP6-3Q3LI67 103 aa10.65□□□□□ -0.7
HTATSF1-202ENST00000425695 PLAC4Q8WY50 150 aa10.64□□□□□ -0.71
HTATSF1-202ENST00000425695 LINC01554Q52M75 96 aa10.6□□□□□ -0.71
HTATSF1-202ENST00000425695 MT1XP80297 61 aa10.5□□□□□ -0.73
HTATSF1-202ENST00000425695 PRO2289Q9P1D8 64 aa10.49□□□□□ -0.73
HTATSF1-202ENST00000425695 SERP1Q9Y6X1 66 aa10.42□□□□□ -0.74
HTATSF1-202ENST00000425695 KRTAP13-4Q3LI77 160 aa10.24□□□□□ -0.77
HTATSF1-202ENST00000425695 KRTAP5-9P26371 169 aa10.22□□□□□ -0.77
HTATSF1-202ENST00000425695 SEC61GP60059 68 aa10.22□□□□□ -0.77
HTATSF1-202ENST00000425695 RPS28P62857 69 aaKnown RBP10.2□□□□□ -0.78
HTATSF1-202ENST00000425695 KRTAP12-2P59991 146 aa10.15□□□□□ -0.78
HTATSF1-202ENST00000425695 MUC12Q9UKN1 5478 aa10.14□□□□□ -0.79
HTATSF1-202ENST00000425695 KMT2DO14686 5537 aa10.14□□□□□ -0.79
HTATSF1-202ENST00000425695 LINC01558Q9Y6Z2 57 aa10.13□□□□□ -0.79
HTATSF1-202ENST00000425695 A0A1B0GU69 56 aa10.12□□□□□ -0.79
HTATSF1-202ENST00000425695 SMIM26A0A096LP01 95 aa10.09□□□□□ -0.79
HTATSF1-202ENST00000425695 KRTAP8-1Q8IUC2 63 aa10.07□□□□□ -0.8
HTATSF1-202ENST00000425695 PRR15LQ9BU68 103 aa10.06□□□□□ -0.8
HTATSF1-202ENST00000425695 KRTAP10-7P60409 375 aaPredicted RBP10.05□□□□□ -0.8
HTATSF1-202ENST00000425695 V9GYY9 64 aa10.05□□□□□ -0.8
HTATSF1-202ENST00000425695 NEBP20929 6669 aa10.04□□□□□ -0.8
HTATSF1-202ENST00000425695 SPRR2FQ96RM1 72 aa10.04□□□□□ -0.8
HTATSF1-202ENST00000425695 KRTAP4-8A0A0G2JLE6 195 aa10.03□□□□□ -0.8
HTATSF1-202ENST00000425695 KRTAP4-8Q9BYQ9 185 aa10.03□□□□□ -0.8
HTATSF1-202ENST00000425695 A0A0D9SG42 100 aa10□□□□□ -0.81
HTATSF1-202ENST00000425695 A0A1B0GU33 70 aa10□□□□□ -0.81
HTATSF1-202ENST00000425695 Q1T7F1 81 aa10□□□□□ -0.81
HTATSF1-202ENST00000425695 SPATA8Q6RVD6 105 aa10□□□□□ -0.81
HTATSF1-202ENST00000425695 CAMK2N1Q7Z7J9 78 aa9.97□□□□□ -0.81
HTATSF1-202ENST00000425695 KRTAP10-12P60413 245 aa9.95□□□□□ -0.82
HTATSF1-202ENST00000425695 MDN1Q9NU22 5596 aa9.89□□□□□ -0.83
HTATSF1-202ENST00000425695 SPRR2EP22531 72 aa9.84□□□□□ -0.83
HTATSF1-202ENST00000425695 SPRR2BP35325 72 aa9.84□□□□□ -0.83
HTATSF1-202ENST00000425695 SPRR2AP35326 72 aa9.84□□□□□ -0.83
HTATSF1-202ENST00000425695 SPINT4Q6UDR6 99 aa9.83□□□□□ -0.84
HTATSF1-202ENST00000425695 PSPHP1O15172 72 aa9.81□□□□□ -0.84
HTATSF1-202ENST00000425695 KRTAP20-1Q3LI63 56 aa9.79□□□□□ -0.84
HTATSF1-202ENST00000425695 UQCR11O14957 56 aa9.74□□□□□ -0.85
HTATSF1-202ENST00000425695 KRTAP12-1P59990 96 aa9.74□□□□□ -0.85
HTATSF1-202ENST00000425695 LCE1AQ5T7P2 110 aa9.72□□□□□ -0.85
HTATSF1-202ENST00000425695 A8MU10 97 aa9.67□□□□□ -0.86
HTATSF1-202ENST00000425695 KRTAP2-3P0C7H8 128 aa9.59□□□□□ -0.87
HTATSF1-202ENST00000425695 KRTAP2-4Q9BYR9 128 aa9.59□□□□□ -0.87
HTATSF1-202ENST00000425695 MIR22HGQ0VDD5 57 aa9.58□□□□□ -0.88
HTATSF1-202ENST00000425695 A6NED7 52 aa9.55□□□□□ -0.88
HTATSF1-202ENST00000425695 SPRR2DP22532 72 aa9.51□□□□□ -0.89
HTATSF1-202ENST00000425695 KRTAP19-7Q3SYF9 63 aa9.37□□□□□ -0.91
HTATSF1-202ENST00000425695 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
HTATSF1-202ENST00000425695 CDC42SE1Q9NRR8 79 aa9.32□□□□□ -0.92
HTATSF1-202ENST00000425695 KRTAP2-2Q9BYT5 123 aa9.29□□□□□ -0.92
HTATSF1-202ENST00000425695 KRTAP2-1Q9BYU5 128 aa9.29□□□□□ -0.92
HTATSF1-202ENST00000425695 MT1EP04732 61 aa9.28□□□□□ -0.92
HTATSF1-202ENST00000425695 K7ERS5 55 aa9.27□□□□□ -0.93
HTATSF1-202ENST00000425695 KRTAP19-5Q3LI72 72 aa9.23□□□□□ -0.93
HTATSF1-202ENST00000425695 LCE3BQ5TA77 95 aa9.23□□□□□ -0.93
HTATSF1-202ENST00000425695 TNP1P09430 55 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms