RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 BRK1Q8WUW1 75 aa6.88□□□□□ -1.31
TMEM50B-201ENST00000420455 A8MU10 97 aa6.85□□□□□ -1.31
TMEM50B-201ENST00000420455 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
TMEM50B-201ENST00000420455 PRO0628Q9UI54 55 aa6.84□□□□□ -1.31
TMEM50B-201ENST00000420455 LCA10Q71F78 164 aa6.78□□□□□ -1.32
TMEM50B-201ENST00000420455 KRTAP4-1Q9BYQ7 146 aa6.77□□□□□ -1.33
TMEM50B-201ENST00000420455 A6NED7 52 aa6.74□□□□□ -1.33
TMEM50B-201ENST00000420455 A0A1B0GU69 56 aa6.74□□□□□ -1.33
TMEM50B-201ENST00000420455 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
TMEM50B-201ENST00000420455 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
TMEM50B-201ENST00000420455 KRTAP19-2Q3LHN2 52 aa6.69□□□□□ -1.34
TMEM50B-201ENST00000420455 RBM12B-AS1Q9P1G2 102 aa6.69□□□□□ -1.34
TMEM50B-201ENST00000420455 CDC42SE1Q9NRR8 79 aa6.68□□□□□ -1.34
TMEM50B-201ENST00000420455 SPTSSBQ8NFR3 76 aa6.67□□□□□ -1.34
TMEM50B-201ENST00000420455 S4R3F8 94 aa6.63□□□□□ -1.35
TMEM50B-201ENST00000420455 MUC2Q02817 5179 aa6.62□□□□□ -1.35
TMEM50B-201ENST00000420455 SPATA8Q6RVD6 105 aa6.58□□□□□ -1.36
TMEM50B-201ENST00000420455 UQCR11O14957 56 aa6.57□□□□□ -1.36
TMEM50B-201ENST00000420455 SEC61GP60059 68 aa6.55□□□□□ -1.36
TMEM50B-201ENST00000420455 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
TMEM50B-201ENST00000420455 FLGP20930 4061 aaPredicted RBP6.53□□□□□ -1.36
TMEM50B-201ENST00000420455 H0YAA0 97 aa6.52□□□□□ -1.37
TMEM50B-201ENST00000420455 KRTAP10-6P60371 365 aaPredicted RBP6.52□□□□□ -1.37
TMEM50B-201ENST00000420455 KRTAP3-2Q9BYR7 98 aa6.52□□□□□ -1.37
TMEM50B-201ENST00000420455 A6NN06 94 aa6.5□□□□□ -1.37
TMEM50B-201ENST00000420455 RNF213Q63HN8 5207 aa6.49□□□□□ -1.37
TMEM50B-201ENST00000420455 UBR4Q5T4S7 5183 aa6.49□□□□□ -1.37
TMEM50B-201ENST00000420455 PMAIP1Q13794 54 aa6.48□□□□□ -1.37
TMEM50B-201ENST00000420455 A0A1B0GU33 70 aa6.48□□□□□ -1.37
TMEM50B-201ENST00000420455 LCE2CQ5TA81 110 aa6.46□□□□□ -1.37
TMEM50B-201ENST00000420455 CSAG1Q6PB30 78 aa6.46□□□□□ -1.37
TMEM50B-201ENST00000420455 P0C880 135 aa6.42□□□□□ -1.38
TMEM50B-201ENST00000420455 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
TMEM50B-201ENST00000420455 ADM2Q7Z4H4 148 aa6.35□□□□□ -1.39
TMEM50B-201ENST00000420455 FAT4Q6V0I7 4981 aa6.31□□□□□ -1.4
TMEM50B-201ENST00000420455 KTN1-AS1Q86SY8 53 aa6.3□□□□□ -1.4
TMEM50B-201ENST00000420455 MT1HP80294 61 aa6.29□□□□□ -1.4
TMEM50B-201ENST00000420455 A0A0D9SG42 100 aa6.21□□□□□ -1.42
TMEM50B-201ENST00000420455 M0QZ58 72 aa6.19□□□□□ -1.42
TMEM50B-201ENST00000420455 LORP23490 312 aaPredicted RBP6.19□□□□□ -1.42
TMEM50B-201ENST00000420455 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
TMEM50B-201ENST00000420455 PRAC1Q96KF2 57 aa6.14□□□□□ -1.43
TMEM50B-201ENST00000420455 KRTAP12-1P59990 96 aa6.12□□□□□ -1.43
TMEM50B-201ENST00000420455 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
TMEM50B-201ENST00000420455 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
TMEM50B-201ENST00000420455 K7ERS5 55 aa6.07□□□□□ -1.44
TMEM50B-201ENST00000420455 M0R2T5 61 aa6.07□□□□□ -1.44
TMEM50B-201ENST00000420455 R4GN34 69 aa6.07□□□□□ -1.44
TMEM50B-201ENST00000420455 MT2AP02795 61 aa6.05□□□□□ -1.44
TMEM50B-201ENST00000420455 LCE2AQ5TA79 106 aaPredicted RBP6.04□□□□□ -1.44
TMEM50B-201ENST00000420455 MT1FP04733 61 aa6.01□□□□□ -1.45
TMEM50B-201ENST00000420455 SPINT4Q6UDR6 99 aa6□□□□□ -1.45
TMEM50B-201ENST00000420455 LINC01554Q52M75 96 aa6□□□□□ -1.45
TMEM50B-201ENST00000420455 SPRR2GQ9BYE4 73 aa6□□□□□ -1.45
TMEM50B-201ENST00000420455 ROMO1P60602 79 aa5.98□□□□□ -1.45
TMEM50B-201ENST00000420455 KRTAP19-1Q8IUB9 90 aa5.96□□□□□ -1.46
TMEM50B-201ENST00000420455 KRTAP10-10P60014 251 aa5.91□□□□□ -1.46
TMEM50B-201ENST00000420455 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
TMEM50B-201ENST00000420455 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
TMEM50B-201ENST00000420455 KRTAP19-8Q3LI54 63 aa5.84□□□□□ -1.47
TMEM50B-201ENST00000420455 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
TMEM50B-201ENST00000420455 MT1BP07438 61 aa5.73□□□□□ -1.49
TMEM50B-201ENST00000420455 PLAC4Q8WY50 150 aa5.68□□□□□ -1.5
TMEM50B-201ENST00000420455 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
TMEM50B-201ENST00000420455 LCE2BO14633 110 aa5.67□□□□□ -1.5
TMEM50B-201ENST00000420455 H3BS24 57 aa5.66□□□□□ -1.5
TMEM50B-201ENST00000420455 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
TMEM50B-201ENST00000420455 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
TMEM50B-201ENST00000420455 MT1XP80297 61 aa5.56□□□□□ -1.52
TMEM50B-201ENST00000420455 USH2AO75445 5202 aa5.52□□□□□ -1.53
TMEM50B-201ENST00000420455 TNP1P09430 55 aa5.45□□□□□ -1.54
TMEM50B-201ENST00000420455 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
TMEM50B-201ENST00000420455 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
TMEM50B-201ENST00000420455 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
TMEM50B-201ENST00000420455 SSPOA2VEC9 5147 aa5.38□□□□□ -1.55
TMEM50B-201ENST00000420455 KRTAP19-6Q3LI70 58 aa5.34□□□□□ -1.55
TMEM50B-201ENST00000420455 KRTAP15-1Q3LI76 137 aa5.32□□□□□ -1.56
TMEM50B-201ENST00000420455 KRTAP10-7P60409 375 aaPredicted RBP5.31□□□□□ -1.56
TMEM50B-201ENST00000420455 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
TMEM50B-201ENST00000420455 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
TMEM50B-201ENST00000420455 A0A0A0MQY5 61 aa5.25□□□□□ -1.57
TMEM50B-201ENST00000420455 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
TMEM50B-201ENST00000420455 KMT2DO14686 5537 aa5.19□□□□□ -1.58
TMEM50B-201ENST00000420455 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
TMEM50B-201ENST00000420455 FSIP2Q5CZC0 6907 aa5.12□□□□□ -1.59
TMEM50B-201ENST00000420455 FCGBPQ9Y6R7 5405 aaPredicted RBP5.08□□□□□ -1.6
TMEM50B-201ENST00000420455 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
TMEM50B-201ENST00000420455 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
TMEM50B-201ENST00000420455 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
TMEM50B-201ENST00000420455 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
TMEM50B-201ENST00000420455 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
TMEM50B-201ENST00000420455 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
TMEM50B-201ENST00000420455 KRTAP19-7Q3SYF9 63 aa4.97□□□□□ -1.61
TMEM50B-201ENST00000420455 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.61
TMEM50B-201ENST00000420455 MT1EP04732 61 aa4.86□□□□□ -1.63
TMEM50B-201ENST00000420455 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
TMEM50B-201ENST00000420455 MACF1Q9UPN3 7388 aaKnown RBP4.81□□□□□ -1.64
TMEM50B-201ENST00000420455 LUZP6Q538Z0 58 aa4.77□□□□□ -1.65
TMEM50B-201ENST00000420455 MT1LQ93083 61 aa4.77□□□□□ -1.65
TMEM50B-201ENST00000420455 LCE3CQ5T5A8 94 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms