RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TP53AIP1Q9HCN2 124 aa6.91□□□□□ -1.3
UBXN4-203ENST00000416538 MT1BP07438 61 aa6.86□□□□□ -1.31
UBXN4-203ENST00000416538 S4R3F8 94 aa6.86□□□□□ -1.31
UBXN4-203ENST00000416538 LCA10Q71F78 164 aa6.85□□□□□ -1.31
UBXN4-203ENST00000416538 C1orf64Q8NEQ6 169 aa6.85□□□□□ -1.31
UBXN4-203ENST00000416538 ACYP1P07311 99 aa6.84□□□□□ -1.31
UBXN4-203ENST00000416538 FAM236AA0A1B0GUQ0 79 aa6.81□□□□□ -1.32
UBXN4-203ENST00000416538 FAM236BA0A1B0GV22 79 aa6.81□□□□□ -1.32
UBXN4-203ENST00000416538 KRTAP6-3Q3LI67 103 aa6.81□□□□□ -1.32
UBXN4-203ENST00000416538 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
UBXN4-203ENST00000416538 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
UBXN4-203ENST00000416538 FAM240AA0A1B0GVK7 77 aa6.78□□□□□ -1.32
UBXN4-203ENST00000416538 CSAG1Q6PB30 78 aa6.78□□□□□ -1.32
UBXN4-203ENST00000416538 ATP5EP2Q5VTU8 51 aa6.77□□□□□ -1.33
UBXN4-203ENST00000416538 A0A087WVE0 104 aa6.76□□□□□ -1.33
UBXN4-203ENST00000416538 TRAV22A0A0B4J277 110 aa6.74□□□□□ -1.33
UBXN4-203ENST00000416538 HIST1H4AP62805 103 aaKnown RBP6.74□□□□□ -1.33
UBXN4-203ENST00000416538 CYP4F30PQ9H0H9 118 aa6.74□□□□□ -1.33
UBXN4-203ENST00000416538 Q5VV11 94 aa6.73□□□□□ -1.33
UBXN4-203ENST00000416538 LOC101927531A0A1B0GV80 90 aa6.72□□□□□ -1.33
UBXN4-203ENST00000416538 A6NN06 94 aa6.71□□□□□ -1.34
UBXN4-203ENST00000416538 KLKP1Q107X0 134 aa6.71□□□□□ -1.34
UBXN4-203ENST00000416538 UQCRQO14949 82 aa6.68□□□□□ -1.34
UBXN4-203ENST00000416538 KRTAP10-5P60370 271 aa6.67□□□□□ -1.34
UBXN4-203ENST00000416538 LINC00643Q86TS7 51 aa6.66□□□□□ -1.34
UBXN4-203ENST00000416538 ATOX1O00244 68 aa6.65□□□□□ -1.34
UBXN4-203ENST00000416538 H0Y9P7 68 aa6.64□□□□□ -1.35
UBXN4-203ENST00000416538 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
UBXN4-203ENST00000416538 NEBP20929 6669 aa6.61□□□□□ -1.35
UBXN4-203ENST00000416538 A0A1B0GV90 55 aa6.61□□□□□ -1.35
UBXN4-203ENST00000416538 NDUFC1O43677 76 aa6.54□□□□□ -1.36
UBXN4-203ENST00000416538 LINC00208Q96KT6 92 aa6.54□□□□□ -1.36
UBXN4-203ENST00000416538 MUC12Q9UKN1 5478 aa6.53□□□□□ -1.36
UBXN4-203ENST00000416538 MP68P56378 58 aa6.53□□□□□ -1.36
UBXN4-203ENST00000416538 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
UBXN4-203ENST00000416538 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
UBXN4-203ENST00000416538 A8MUN3 132 aa6.52□□□□□ -1.37
UBXN4-203ENST00000416538 J3QR89 54 aa6.52□□□□□ -1.37
UBXN4-203ENST00000416538 IMUPQ9GZP8 106 aa6.52□□□□□ -1.37
UBXN4-203ENST00000416538 H0YAA0 97 aa6.5□□□□□ -1.37
UBXN4-203ENST00000416538 KRTAP5-9P26371 169 aa6.5□□□□□ -1.37
UBXN4-203ENST00000416538 OCR1Q9BZK8 76 aa6.5□□□□□ -1.37
UBXN4-203ENST00000416538 ADM2Q7Z4H4 148 aa6.44□□□□□ -1.38
UBXN4-203ENST00000416538 H3BPC8 53 aa6.43□□□□□ -1.38
UBXN4-203ENST00000416538 SCGB1A1P11684 91 aa6.43□□□□□ -1.38
UBXN4-203ENST00000416538 KMT2DO14686 5537 aa6.4□□□□□ -1.38
UBXN4-203ENST00000416538 MT1XP80297 61 aa6.39□□□□□ -1.39
UBXN4-203ENST00000416538 P0C880 135 aa6.35□□□□□ -1.39
UBXN4-203ENST00000416538 KRTAP20-1Q3LI63 56 aa6.35□□□□□ -1.39
UBXN4-203ENST00000416538 DMAC1Q96GE9 116 aa6.32□□□□□ -1.4
UBXN4-203ENST00000416538 MDN1Q9NU22 5596 aa6.31□□□□□ -1.4
UBXN4-203ENST00000416538 C20orf197Q8N268 126 aa6.27□□□□□ -1.41
UBXN4-203ENST00000416538 K7ERU9 68 aa6.26□□□□□ -1.41
UBXN4-203ENST00000416538 SPRR2FQ96RM1 72 aa6.26□□□□□ -1.41
UBXN4-203ENST00000416538 MT-ATP8P03928 68 aa6.25□□□□□ -1.41
UBXN4-203ENST00000416538 SMIM20Q8N5G0 67 aa6.25□□□□□ -1.41
UBXN4-203ENST00000416538 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
UBXN4-203ENST00000416538 R4GN34 69 aa6.24□□□□□ -1.41
UBXN4-203ENST00000416538 M0QZ58 72 aa6.23□□□□□ -1.41
UBXN4-203ENST00000416538 PLAC4Q8WY50 150 aa6.22□□□□□ -1.41
UBXN4-203ENST00000416538 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.42
UBXN4-203ENST00000416538 PCP4P48539 62 aa6.21□□□□□ -1.42
UBXN4-203ENST00000416538 ACYP2P14621 99 aa6.2□□□□□ -1.42
UBXN4-203ENST00000416538 KRTAP12-2P59991 146 aa6.2□□□□□ -1.42
UBXN4-203ENST00000416538 SPRR2EP22531 72 aa6.19□□□□□ -1.42
UBXN4-203ENST00000416538 SPRR2BP35325 72 aa6.19□□□□□ -1.42
UBXN4-203ENST00000416538 SPRR2AP35326 72 aa6.19□□□□□ -1.42
UBXN4-203ENST00000416538 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
UBXN4-203ENST00000416538 LINC01554Q52M75 96 aa6.14□□□□□ -1.43
UBXN4-203ENST00000416538 SPTSSBQ8NFR3 76 aa6.14□□□□□ -1.43
UBXN4-203ENST00000416538 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
UBXN4-203ENST00000416538 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
UBXN4-203ENST00000416538 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
UBXN4-203ENST00000416538 CHKB-CPT1BH3BT56 60 aa6.1□□□□□ -1.43
UBXN4-203ENST00000416538 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
UBXN4-203ENST00000416538 SNURFQ9Y675 71 aa6.08□□□□□ -1.44
UBXN4-203ENST00000416538 KRTAP10-12P60413 245 aa6.04□□□□□ -1.44
UBXN4-203ENST00000416538 SERP2Q8N6R1 65 aa6.01□□□□□ -1.45
UBXN4-203ENST00000416538 SPANXA2-OT1Q8N9U9 137 aa6.01□□□□□ -1.45
UBXN4-203ENST00000416538 SPRR2DP22532 72 aa5.97□□□□□ -1.45
UBXN4-203ENST00000416538 KRTAP13-4Q3LI77 160 aa5.93□□□□□ -1.46
UBXN4-203ENST00000416538 KRTAP2-2Q9BYT5 123 aa5.93□□□□□ -1.46
UBXN4-203ENST00000416538 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
UBXN4-203ENST00000416538 A0A0A0MQY5 61 aa5.86□□□□□ -1.47
UBXN4-203ENST00000416538 COA5Q86WW8 74 aa5.84□□□□□ -1.47
UBXN4-203ENST00000416538 COX7CP15954 63 aa5.82□□□□□ -1.48
UBXN4-203ENST00000416538 SEC61GP60059 68 aa5.79□□□□□ -1.48
UBXN4-203ENST00000416538 SERP1Q9Y6X1 66 aa5.77□□□□□ -1.49
UBXN4-203ENST00000416538 CAMK2N1Q7Z7J9 78 aa5.75□□□□□ -1.49
UBXN4-203ENST00000416538 KRTAP19-7Q3SYF9 63 aa5.73□□□□□ -1.49
UBXN4-203ENST00000416538 H7BZZ5 65 aa5.72□□□□□ -1.49
UBXN4-203ENST00000416538 CYSTM1Q9H1C7 97 aa5.69□□□□□ -1.5
UBXN4-203ENST00000416538 A0A0D9SG42 100 aa5.66□□□□□ -1.5
UBXN4-203ENST00000416538 A0A1B0GU33 70 aa5.66□□□□□ -1.5
UBXN4-203ENST00000416538 MT1EP04732 61 aa5.66□□□□□ -1.5
UBXN4-203ENST00000416538 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
UBXN4-203ENST00000416538 ANAPC13Q9BS18 74 aa5.62□□□□□ -1.51
UBXN4-203ENST00000416538 DSTQ03001 7570 aaKnown RBP5.6□□□□□ -1.51
UBXN4-203ENST00000416538 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
UBXN4-203ENST00000416538 KRTAP19-3Q7Z4W3 81 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms