RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 H0Y9P7 68 aa8.57□□□□□ -1.04
SF3A1-202ENST00000411423 SPRR2GQ9BYE4 73 aa8.57□□□□□ -1.04
SF3A1-202ENST00000411423 KRTAP19-8Q3LI54 63 aa8.54□□□□□ -1.04
SF3A1-202ENST00000411423 ATOX1O00244 68 aa8.53□□□□□ -1.04
SF3A1-202ENST00000411423 KLKP1Q107X0 134 aa8.52□□□□□ -1.05
SF3A1-202ENST00000411423 OCR1Q9BZK8 76 aa8.52□□□□□ -1.05
SF3A1-202ENST00000411423 K7ERU9 68 aa8.49□□□□□ -1.05
SF3A1-202ENST00000411423 Q5VV11 94 aa8.47□□□□□ -1.05
SF3A1-202ENST00000411423 IMUPQ9GZP8 106 aa8.46□□□□□ -1.06
SF3A1-202ENST00000411423 LINC00208Q96KT6 92 aa8.44□□□□□ -1.06
SF3A1-202ENST00000411423 A6NN06 94 aa8.38□□□□□ -1.07
SF3A1-202ENST00000411423 KRTAP6-3Q3LI67 103 aa8.37□□□□□ -1.07
SF3A1-202ENST00000411423 NDUFC1O43677 76 aa8.36□□□□□ -1.07
SF3A1-202ENST00000411423 MT-ATP8P03928 68 aa8.36□□□□□ -1.07
SF3A1-202ENST00000411423 MP68P56378 58 aa8.36□□□□□ -1.07
SF3A1-202ENST00000411423 H3BPC8 53 aa8.35□□□□□ -1.07
SF3A1-202ENST00000411423 KRTAP10-5P60370 271 aa8.34□□□□□ -1.07
SF3A1-202ENST00000411423 A8MUN3 132 aa8.33□□□□□ -1.08
SF3A1-202ENST00000411423 H0YAA0 97 aa8.33□□□□□ -1.08
SF3A1-202ENST00000411423 CRIPTQ9P021 101 aa8.32□□□□□ -1.08
SF3A1-202ENST00000411423 SCGB1A1P11684 91 aa8.3□□□□□ -1.08
SF3A1-202ENST00000411423 ADM2Q7Z4H4 148 aa8.27□□□□□ -1.09
SF3A1-202ENST00000411423 SMIM20Q8N5G0 67 aa8.24□□□□□ -1.09
SF3A1-202ENST00000411423 TRAV7A0A075B6U4 112 aa8.2□□□□□ -1.1
SF3A1-202ENST00000411423 DMAC1Q96GE9 116 aa8.17□□□□□ -1.1
SF3A1-202ENST00000411423 MUC12Q9UKN1 5478 aa8.17□□□□□ -1.1
SF3A1-202ENST00000411423 P0C880 135 aa8.14□□□□□ -1.11
SF3A1-202ENST00000411423 NEBP20929 6669 aa8.1□□□□□ -1.11
SF3A1-202ENST00000411423 KRTAP3-2Q9BYR7 98 aa8.09□□□□□ -1.11
SF3A1-202ENST00000411423 MT1XP80297 61 aa8.05□□□□□ -1.12
SF3A1-202ENST00000411423 KRTAP5-9P26371 169 aa8.02□□□□□ -1.13
SF3A1-202ENST00000411423 SERP2Q8N6R1 65 aa8.02□□□□□ -1.13
SF3A1-202ENST00000411423 KMT2DO14686 5537 aa8.01□□□□□ -1.13
SF3A1-202ENST00000411423 R4GN34 69 aa8□□□□□ -1.13
SF3A1-202ENST00000411423 M0QZ58 72 aa7.98□□□□□ -1.13
SF3A1-202ENST00000411423 MDN1Q9NU22 5596 aa7.94□□□□□ -1.14
SF3A1-202ENST00000411423 C20orf197Q8N268 126 aa7.94□□□□□ -1.14
SF3A1-202ENST00000411423 PLAC4Q8WY50 150 aa7.94□□□□□ -1.14
SF3A1-202ENST00000411423 SNURFQ9Y675 71 aa7.94□□□□□ -1.14
SF3A1-202ENST00000411423 ACYP2P14621 99 aa7.92□□□□□ -1.14
SF3A1-202ENST00000411423 SPANXA2-OT1Q8N9U9 137 aa7.92□□□□□ -1.14
SF3A1-202ENST00000411423 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.14
SF3A1-202ENST00000411423 LINC01554Q52M75 96 aa7.86□□□□□ -1.15
SF3A1-202ENST00000411423 COX7CP15954 63 aa7.83□□□□□ -1.16
SF3A1-202ENST00000411423 KRTAP20-1Q3LI63 56 aa7.79□□□□□ -1.16
SF3A1-202ENST00000411423 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
SF3A1-202ENST00000411423 SPTSSBQ8NFR3 76 aa7.77□□□□□ -1.17
SF3A1-202ENST00000411423 SPRR2FQ96RM1 72 aa7.76□□□□□ -1.17
SF3A1-202ENST00000411423 CHKB-CPT1BH3BT56 60 aa7.75□□□□□ -1.17
SF3A1-202ENST00000411423 KRTAP4-8A0A0G2JLE6 195 aa7.73□□□□□ -1.17
SF3A1-202ENST00000411423 KRTAP4-8Q9BYQ9 185 aa7.73□□□□□ -1.17
SF3A1-202ENST00000411423 KRTAP8-1Q8IUC2 63 aa7.71□□□□□ -1.18
SF3A1-202ENST00000411423 KRTAP10-7P60409 375 aaPredicted RBP7.7□□□□□ -1.18
SF3A1-202ENST00000411423 H7BZZ5 65 aa7.69□□□□□ -1.18
SF3A1-202ENST00000411423 CYSTM1Q9H1C7 97 aa7.67□□□□□ -1.18
SF3A1-202ENST00000411423 SPRR2EP22531 72 aa7.65□□□□□ -1.18
SF3A1-202ENST00000411423 SPRR2BP35325 72 aa7.65□□□□□ -1.18
SF3A1-202ENST00000411423 SPRR2AP35326 72 aa7.65□□□□□ -1.18
SF3A1-202ENST00000411423 KRTAP13-4Q3LI77 160 aa7.65□□□□□ -1.18
SF3A1-202ENST00000411423 ANAPC13Q9BS18 74 aa7.62□□□□□ -1.19
SF3A1-202ENST00000411423 KRTAP10-12P60413 245 aa7.61□□□□□ -1.19
SF3A1-202ENST00000411423 COA5Q86WW8 74 aa7.61□□□□□ -1.19
SF3A1-202ENST00000411423 LCE1AQ5T7P2 110 aa7.59□□□□□ -1.19
SF3A1-202ENST00000411423 KRTAP2-3P0C7H8 128 aa7.53□□□□□ -1.2
SF3A1-202ENST00000411423 KRTAP2-4Q9BYR9 128 aa7.53□□□□□ -1.2
SF3A1-202ENST00000411423 CCDC179H3BU77 68 aa7.48□□□□□ -1.21
SF3A1-202ENST00000411423 ATP5EP56381 51 aaPredicted RBP7.39□□□□□ -1.23
SF3A1-202ENST00000411423 SPRR2DP22532 72 aa7.38□□□□□ -1.23
SF3A1-202ENST00000411423 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
SF3A1-202ENST00000411423 CAMK2N1Q7Z7J9 78 aa7.34□□□□□ -1.23
SF3A1-202ENST00000411423 SEC61GP60059 68 aa7.33□□□□□ -1.24
SF3A1-202ENST00000411423 A0A0D9SG42 100 aa7.32□□□□□ -1.24
SF3A1-202ENST00000411423 SERP1Q9Y6X1 66 aa7.32□□□□□ -1.24
SF3A1-202ENST00000411423 KRTAP2-2Q9BYT5 123 aa7.3□□□□□ -1.24
SF3A1-202ENST00000411423 KRTAP2-1Q9BYU5 128 aa7.3□□□□□ -1.24
SF3A1-202ENST00000411423 TMEM258P61165 79 aa7.27□□□□□ -1.25
SF3A1-202ENST00000411423 A0A1B0GU33 70 aa7.26□□□□□ -1.25
SF3A1-202ENST00000411423 KRTAP12-1P59990 96 aa7.21□□□□□ -1.26
SF3A1-202ENST00000411423 KRTAP19-7Q3SYF9 63 aa7.21□□□□□ -1.26
SF3A1-202ENST00000411423 SPINT4Q6UDR6 99 aa7.2□□□□□ -1.26
SF3A1-202ENST00000411423 A0A1B0GU69 56 aa7.19□□□□□ -1.26
SF3A1-202ENST00000411423 LCE3BQ5TA77 95 aa7.19□□□□□ -1.26
SF3A1-202ENST00000411423 MT1EP04732 61 aa7.12□□□□□ -1.27
SF3A1-202ENST00000411423 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
SF3A1-202ENST00000411423 A8MU10 97 aa7.09□□□□□ -1.27
SF3A1-202ENST00000411423 LCE5AQ5TCM9 118 aa7.06□□□□□ -1.28
SF3A1-202ENST00000411423 PRR15LQ9BU68 103 aa7.05□□□□□ -1.28
SF3A1-202ENST00000411423 SMIM26A0A096LP01 95 aa7.03□□□□□ -1.28
SF3A1-202ENST00000411423 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
SF3A1-202ENST00000411423 KRTAP19-5Q3LI72 72 aa7□□□□□ -1.29
SF3A1-202ENST00000411423 DSTQ03001 7570 aaKnown RBP6.97□□□□□ -1.29
SF3A1-202ENST00000411423 GPR98Q8WXG9 6306 aa6.94□□□□□ -1.3
SF3A1-202ENST00000411423 C10orf95Q9H7T3 257 aa6.92□□□□□ -1.3
SF3A1-202ENST00000411423 UQCR11O14957 56 aa6.85□□□□□ -1.31
SF3A1-202ENST00000411423 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
SF3A1-202ENST00000411423 MT1GP13640 62 aa6.83□□□□□ -1.32
SF3A1-202ENST00000411423 V9GYY9 64 aa6.82□□□□□ -1.32
SF3A1-202ENST00000411423 Q1T7F1 81 aa6.8□□□□□ -1.32
SF3A1-202ENST00000411423 MT1LQ93083 61 aa6.8□□□□□ -1.32
SF3A1-202ENST00000411423 MT1MQ8N339 61 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms