RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 SPRR2GQ9BYE4 73 aa7.57□□□□□ -1.2
SCRN1-203ENST00000409570 FAM236AA0A1B0GUQ0 79 aa7.56□□□□□ -1.2
SCRN1-203ENST00000409570 FAM236BA0A1B0GV22 79 aa7.56□□□□□ -1.2
SCRN1-203ENST00000409570 A0A087WVE0 104 aa7.55□□□□□ -1.2
SCRN1-203ENST00000409570 KRTAP2-3P0C7H8 128 aa7.55□□□□□ -1.2
SCRN1-203ENST00000409570 KRTAP2-4Q9BYR9 128 aa7.55□□□□□ -1.2
SCRN1-203ENST00000409570 CYP4F30PQ9H0H9 118 aa7.54□□□□□ -1.2
SCRN1-203ENST00000409570 C5orf47Q569G3 176 aa7.52□□□□□ -1.21
SCRN1-203ENST00000409570 C1orf64Q8NEQ6 169 aa7.51□□□□□ -1.21
SCRN1-203ENST00000409570 H0Y9P7 68 aa7.5□□□□□ -1.21
SCRN1-203ENST00000409570 K7ERU9 68 aa7.5□□□□□ -1.21
SCRN1-203ENST00000409570 KRTAP3-1Q9BYR8 98 aa7.46□□□□□ -1.22
SCRN1-203ENST00000409570 OCR1Q9BZK8 76 aa7.45□□□□□ -1.22
SCRN1-203ENST00000409570 IMUPQ9GZP8 106 aa7.45□□□□□ -1.22
SCRN1-203ENST00000409570 MP68P56378 58 aa7.44□□□□□ -1.22
SCRN1-203ENST00000409570 S4R3F8 94 aa7.44□□□□□ -1.22
SCRN1-203ENST00000409570 SCGB1A1P11684 91 aa7.41□□□□□ -1.22
SCRN1-203ENST00000409570 H3BPC8 53 aa7.4□□□□□ -1.22
SCRN1-203ENST00000409570 CSAG1Q6PB30 78 aa7.39□□□□□ -1.23
SCRN1-203ENST00000409570 LINC00208Q96KT6 92 aa7.39□□□□□ -1.23
SCRN1-203ENST00000409570 KLKP1Q107X0 134 aa7.37□□□□□ -1.23
SCRN1-203ENST00000409570 LCA10Q71F78 164 aa7.36□□□□□ -1.23
SCRN1-203ENST00000409570 SPRR2EP22531 72 aa7.35□□□□□ -1.23
SCRN1-203ENST00000409570 SPRR2BP35325 72 aa7.35□□□□□ -1.23
SCRN1-203ENST00000409570 SPRR2AP35326 72 aa7.35□□□□□ -1.23
SCRN1-203ENST00000409570 A8MUN3 132 aa7.34□□□□□ -1.23
SCRN1-203ENST00000409570 SPRR2FQ96RM1 72 aa7.34□□□□□ -1.23
SCRN1-203ENST00000409570 MT-ATP8P03928 68 aa7.32□□□□□ -1.24
SCRN1-203ENST00000409570 SMIM20Q8N5G0 67 aa7.32□□□□□ -1.24
SCRN1-203ENST00000409570 KRTAP2-2Q9BYT5 123 aa7.28□□□□□ -1.24
SCRN1-203ENST00000409570 KRTAP2-1Q9BYU5 128 aa7.28□□□□□ -1.24
SCRN1-203ENST00000409570 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
SCRN1-203ENST00000409570 KRTAP3-2Q9BYR7 98 aa7.26□□□□□ -1.25
SCRN1-203ENST00000409570 NDUFC1O43677 76 aa7.24□□□□□ -1.25
SCRN1-203ENST00000409570 TRAV7A0A075B6U4 112 aa7.23□□□□□ -1.25
SCRN1-203ENST00000409570 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
SCRN1-203ENST00000409570 LCE1AQ5T7P2 110 aa7.21□□□□□ -1.26
SCRN1-203ENST00000409570 KRTAP8-1Q8IUC2 63 aa7.15□□□□□ -1.26
SCRN1-203ENST00000409570 DMAC1Q96GE9 116 aa7.15□□□□□ -1.26
SCRN1-203ENST00000409570 H0YAA0 97 aa7.14□□□□□ -1.27
SCRN1-203ENST00000409570 SPRR2DP22532 72 aa7.11□□□□□ -1.27
SCRN1-203ENST00000409570 MT1XP80297 61 aa7.11□□□□□ -1.27
SCRN1-203ENST00000409570 PRO2289Q9P1D8 64 aa7.09□□□□□ -1.27
SCRN1-203ENST00000409570 SERP2Q8N6R1 65 aa7.06□□□□□ -1.28
SCRN1-203ENST00000409570 ACYP2P14621 99 aa7.05□□□□□ -1.28
SCRN1-203ENST00000409570 KRTAP12-2P59991 146 aa7.02□□□□□ -1.29
SCRN1-203ENST00000409570 SNURFQ9Y675 71 aa7□□□□□ -1.29
SCRN1-203ENST00000409570 ADM2Q7Z4H4 148 aa6.99□□□□□ -1.29
SCRN1-203ENST00000409570 C20orf197Q8N268 126 aa6.99□□□□□ -1.29
SCRN1-203ENST00000409570 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
SCRN1-203ENST00000409570 SPANXA2-OT1Q8N9U9 137 aa6.98□□□□□ -1.29
SCRN1-203ENST00000409570 KRTAP4-8Q9BYQ9 185 aa6.98□□□□□ -1.29
SCRN1-203ENST00000409570 SPTSSBQ8NFR3 76 aa6.97□□□□□ -1.29
SCRN1-203ENST00000409570 LCE3BQ5TA77 95 aa6.96□□□□□ -1.3
SCRN1-203ENST00000409570 PLAC4Q8WY50 150 aa6.93□□□□□ -1.3
SCRN1-203ENST00000409570 CHKB-CPT1BH3BT56 60 aa6.91□□□□□ -1.3
SCRN1-203ENST00000409570 COX7CP15954 63 aa6.9□□□□□ -1.3
SCRN1-203ENST00000409570 GPR98Q8WXG9 6306 aa6.89□□□□□ -1.31
SCRN1-203ENST00000409570 R4GN34 69 aa6.85□□□□□ -1.31
SCRN1-203ENST00000409570 P0C880 135 aa6.82□□□□□ -1.32
SCRN1-203ENST00000409570 KRTAP10-7P60409 375 aaPredicted RBP6.78□□□□□ -1.32
SCRN1-203ENST00000409570 M0QZ58 72 aa6.76□□□□□ -1.33
SCRN1-203ENST00000409570 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
SCRN1-203ENST00000409570 KRTAP10-12P60413 245 aa6.74□□□□□ -1.33
SCRN1-203ENST00000409570 H7BZZ5 65 aa6.73□□□□□ -1.33
SCRN1-203ENST00000409570 COA5Q86WW8 74 aa6.71□□□□□ -1.34
SCRN1-203ENST00000409570 DSTQ03001 7570 aaKnown RBP6.67□□□□□ -1.34
SCRN1-203ENST00000409570 CYSTM1Q9H1C7 97 aa6.66□□□□□ -1.34
SCRN1-203ENST00000409570 KRTAP4-9Q9BYQ8 210 aa6.63□□□□□ -1.35
SCRN1-203ENST00000409570 LINC01554Q52M75 96 aa6.62□□□□□ -1.35
SCRN1-203ENST00000409570 SEC61GP60059 68 aa6.61□□□□□ -1.35
SCRN1-203ENST00000409570 SERP1Q9Y6X1 66 aa6.57□□□□□ -1.36
SCRN1-203ENST00000409570 CCDC179H3BU77 68 aa6.55□□□□□ -1.36
SCRN1-203ENST00000409570 ATP5EP56381 51 aaPredicted RBP6.55□□□□□ -1.36
SCRN1-203ENST00000409570 LCE5AQ5TCM9 118 aa6.47□□□□□ -1.37
SCRN1-203ENST00000409570 KRTAP13-4Q3LI77 160 aa6.44□□□□□ -1.38
SCRN1-203ENST00000409570 A0A1B0GU33 70 aa6.42□□□□□ -1.38
SCRN1-203ENST00000409570 TMEM258P61165 79 aa6.41□□□□□ -1.38
SCRN1-203ENST00000409570 LCE1DQ5T752 114 aa6.41□□□□□ -1.38
SCRN1-203ENST00000409570 A0A1B0GU69 56 aa6.4□□□□□ -1.38
SCRN1-203ENST00000409570 KRTAP19-3Q7Z4W3 81 aa6.37□□□□□ -1.39
SCRN1-203ENST00000409570 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
SCRN1-203ENST00000409570 MT1EP04732 61 aa6.33□□□□□ -1.4
SCRN1-203ENST00000409570 CAMK2N1Q7Z7J9 78 aa6.32□□□□□ -1.4
SCRN1-203ENST00000409570 PRR15LQ9BU68 103 aa6.32□□□□□ -1.4
SCRN1-203ENST00000409570 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
SCRN1-203ENST00000409570 HMCN1Q96RW7 5635 aa6.3□□□□□ -1.4
SCRN1-203ENST00000409570 AHNAK2Q8IVF2 5795 aa6.28□□□□□ -1.4
SCRN1-203ENST00000409570 A0A0D9SG42 100 aa6.28□□□□□ -1.4
SCRN1-203ENST00000409570 SMIM26A0A096LP01 95 aa6.27□□□□□ -1.41
SCRN1-203ENST00000409570 MT4P47944 62 aa6.26□□□□□ -1.41
SCRN1-203ENST00000409570 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
SCRN1-203ENST00000409570 LINC01558Q9Y6Z2 57 aa6.25□□□□□ -1.41
SCRN1-203ENST00000409570 KRTAP5-10Q6L8G5 202 aa6.22□□□□□ -1.41
SCRN1-203ENST00000409570 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.42
SCRN1-203ENST00000409570 KRTAP12-1P59990 96 aa6.19□□□□□ -1.42
SCRN1-203ENST00000409570 MT1GP13640 62 aa6.16□□□□□ -1.42
SCRN1-203ENST00000409570 A8MU10 97 aa6.1□□□□□ -1.43
SCRN1-203ENST00000409570 UQCR11O14957 56 aa6.1□□□□□ -1.43
SCRN1-203ENST00000409570 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms