RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ASXL1Q8IXJ9 1541 aa0.04□□□□□ -2.4
HMGB1P17-201ENST00000403495 ABCA9Q8IUA7 1624 aa0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 RNF17Q9BXT8 1623 aaKnown RBP0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 DNAH8Q96JB1 4490 aa0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 PARP4Q9UKK3 1724 aaKnown RBP0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 DNAH2Q9P225 4427 aa0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 H3BNG1 76 aa0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 IAPPP10997 89 aa0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 KRTAP20-2Q3LI61 65 aa0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 KIAA0586Q9BVV6 1533 aa0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 ETDCA0A1B0GVM5 59 aa0.01□□□□□ -2.41
HMGB1P17-201ENST00000403495 DEFB130BP0DP73 79 aa0.01□□□□□ -2.41
HMGB1P17-201ENST00000403495 DEFB130AP0DP74 79 aa0.01□□□□□ -2.41
HMGB1P17-201ENST00000403495 CRIP1P50238 77 aa0.01□□□□□ -2.41
HMGB1P17-201ENST00000403495 ITSN1Q15811 1721 aa0.01□□□□□ -2.41
HMGB1P17-201ENST00000403495 NRAPQ86VF7 1730 aa0□□□□□ -2.41
HMGB1P17-201ENST00000403495 VPS13DQ5THJ4 4388 aa-0.01□□□□□ -2.41
HMGB1P17-201ENST00000403495 TJP1Q07157 1748 aa-0.01□□□□□ -2.41
HMGB1P17-201ENST00000403495 NHSQ6T4R5 1651 aa-0.01□□□□□ -2.41
HMGB1P17-201ENST00000403495 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
HMGB1P17-201ENST00000403495 DEFB106AQ8N104 65 aa-0.01□□□□□ -2.41
HMGB1P17-201ENST00000403495 DNMBPQ6XZF7 1577 aa-0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 INO80Q9ULG1 1556 aaPredicted RBP-0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 CLASP1Q7Z460 1538 aa-0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 EEA1Q15075 1411 aa-0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 C9orf92A6NGG3 77 aa-0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 MINOS1Q5TGZ0 78 aa-0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 ZC3H13Q5T200 1668 aaKnown RBP-0.02□□□□□ -2.41
HMGB1P17-201ENST00000403495 EFCAB5A4FU69 1503 aa-0.03□□□□□ -2.41
HMGB1P17-201ENST00000403495 EFCAB6Q5THR3 1501 aa-0.03□□□□□ -2.41
HMGB1P17-201ENST00000403495 FCER1GP30273 86 aa-0.03□□□□□ -2.41
HMGB1P17-201ENST00000403495 PRLHP81277 87 aa-0.03□□□□□ -2.41
HMGB1P17-201ENST00000403495 DEFB114Q30KQ6 69 aa-0.03□□□□□ -2.41
HMGB1P17-201ENST00000403495 KRTAP19-7Q3SYF9 63 aa-0.03□□□□□ -2.41
HMGB1P17-201ENST00000403495 MADDQ8WXG6 1647 aa-0.04□□□□□ -2.42
HMGB1P17-201ENST00000403495 DEFB110Q30KQ9 67 aa-0.04□□□□□ -2.42
HMGB1P17-201ENST00000403495 NCBP2-AS2Q69YL0 99 aa-0.04□□□□□ -2.42
HMGB1P17-201ENST00000403495 S4R3F8 94 aa-0.04□□□□□ -2.42
HMGB1P17-201ENST00000403495 MROH1Q8NDA8 1641 aa-0.05□□□□□ -2.42
HMGB1P17-201ENST00000403495 H3BUA1 57 aa-0.05□□□□□ -2.42
HMGB1P17-201ENST00000403495 KRTAP6-2Q3LI66 62 aa-0.05□□□□□ -2.42
HMGB1P17-201ENST00000403495 ABRACLQ9P1F3 81 aa-0.05□□□□□ -2.42
HMGB1P17-201ENST00000403495 C6orf48Q9UBA6 75 aa-0.05□□□□□ -2.42
HMGB1P17-201ENST00000403495 ABCC6O95255 1503 aa-0.06□□□□□ -2.42
HMGB1P17-201ENST00000403495 LINC01549A6NIU2 74 aa-0.06□□□□□ -2.42
HMGB1P17-201ENST00000403495 SFTA3P0C7M3 94 aa-0.06□□□□□ -2.42
HMGB1P17-201ENST00000403495 WT1-ASQ06250 92 aa-0.06□□□□□ -2.42
HMGB1P17-201ENST00000403495 KRTAP19-8Q3LI54 63 aa-0.06□□□□□ -2.42
HMGB1P17-201ENST00000403495 KRTAP8-1Q8IUC2 63 aa-0.06□□□□□ -2.42
HMGB1P17-201ENST00000403495 DEFB104AQ8WTQ1 72 aa-0.06□□□□□ -2.42
HMGB1P17-201ENST00000403495 NOP10Q9NPE3 64 aaKnown RBP-0.06□□□□□ -2.42
HMGB1P17-201ENST00000403495 SERF2P84101 59 aa-0.07□□□□□ -2.42
HMGB1P17-201ENST00000403495 C3P01024 1663 aa-0.08□□□□□ -2.42
HMGB1P17-201ENST00000403495 NMES1Q9C002 83 aa-0.08□□□□□ -2.42
HMGB1P17-201ENST00000403495 ANKRD36CQ5JPF3 1778 aa-0.09□□□□□ -2.42
HMGB1P17-201ENST00000403495 A0A087WWC5 75 aa-0.09□□□□□ -2.42
HMGB1P17-201ENST00000403495 MMP24-AS1A0A0U1RRL7 71 aa-0.09□□□□□ -2.42
HMGB1P17-201ENST00000403495 K7EMI3 77 aa-0.09□□□□□ -2.42
HMGB1P17-201ENST00000403495 M0R1W7 72 aa-0.09□□□□□ -2.42
HMGB1P17-201ENST00000403495 RPS27P42677 84 aaKnown RBP-0.09□□□□□ -2.42
HMGB1P17-201ENST00000403495 MT1HP80294 61 aa-0.09□□□□□ -2.42
HMGB1P17-201ENST00000403495 RPS27LQ71UM5 84 aaKnown RBP-0.09□□□□□ -2.42
HMGB1P17-201ENST00000403495 S100ZQ8WXG8 99 aa-0.09□□□□□ -2.42
HMGB1P17-201ENST00000403495 CPS1P31327 1500 aa-0.09□□□□□ -2.42
HMGB1P17-201ENST00000403495 KIF1AQ12756 1690 aa-0.1□□□□□ -2.43
HMGB1P17-201ENST00000403495 IGLV5-48A0A075B6I7 105 aa-0.1□□□□□ -2.43
HMGB1P17-201ENST00000403495 TNP1P09430 55 aa-0.1□□□□□ -2.43
HMGB1P17-201ENST00000403495 SMIM5Q71RC9 77 aa-0.1□□□□□ -2.43
HMGB1P17-201ENST00000403495 TMEM167BQ9NRX6 74 aa-0.1□□□□□ -2.43
HMGB1P17-201ENST00000403495 ITSN2Q9NZM3 1697 aa-0.11□□□□□ -2.43
HMGB1P17-201ENST00000403495 CCDC180Q9P1Z9 1646 aa-0.11□□□□□ -2.43
HMGB1P17-201ENST00000403495 SMIM27A0A1W2PRY6 76 aa-0.11□□□□□ -2.43
HMGB1P17-201ENST00000403495 MT1AP04731 61 aa-0.11□□□□□ -2.43
HMGB1P17-201ENST00000403495 MT1BP07438 61 aa-0.11□□□□□ -2.43
HMGB1P17-201ENST00000403495 CLPSL2Q6UWE3 100 aa-0.11□□□□□ -2.43
HMGB1P17-201ENST00000403495 DEFB124Q8NES8 71 aa-0.11□□□□□ -2.43
HMGB1P17-201ENST00000403495 KAAG1Q9UBP8 84 aa-0.11□□□□□ -2.43
HMGB1P17-201ENST00000403495 UGGT1Q9NYU2 1555 aa-0.11□□□□□ -2.43
HMGB1P17-201ENST00000403495 TOGARAM1Q9Y4F4 1720 aa-0.12□□□□□ -2.43
HMGB1P17-201ENST00000403495 SMIM31A0A1B0GVY4 71 aa-0.12□□□□□ -2.43
HMGB1P17-201ENST00000403495 M0QY20 66 aa-0.12□□□□□ -2.43
HMGB1P17-201ENST00000403495 DEFB1P60022 68 aa-0.12□□□□□ -2.43
HMGB1P17-201ENST00000403495 LINC00308Q8TCZ7 52 aa-0.12□□□□□ -2.43
HMGB1P17-201ENST00000403495 PREX2Q70Z35 1606 aa-0.13□□□□□ -2.43
HMGB1P17-201ENST00000403495 WFDC10BQ8IUB3 73 aa-0.13□□□□□ -2.43
HMGB1P17-201ENST00000403495 LY75O60449 1722 aa-0.13□□□□□ -2.43
HMGB1P17-201ENST00000403495 H0YGX0 51 aa-0.14□□□□□ -2.43
HMGB1P17-201ENST00000403495 SPART-AS1P0CW21 52 aa-0.14□□□□□ -2.43
HMGB1P17-201ENST00000403495 MT1HL1P0DM35 61 aa-0.14□□□□□ -2.43
HMGB1P17-201ENST00000403495 ABCA6Q8N139 1617 aa-0.14□□□□□ -2.43
HMGB1P17-201ENST00000403495 MT1FP04733 61 aa-0.15□□□□□ -2.43
HMGB1P17-201ENST00000403495 KIF21BO75037 1637 aa-0.16□□□□□ -2.43
HMGB1P17-201ENST00000403495 LINC01546A6NGU7 62 aa-0.16□□□□□ -2.44
HMGB1P17-201ENST00000403495 A8MTW9 85 aa-0.16□□□□□ -2.44
HMGB1P17-201ENST00000403495 M0QZ58 72 aa-0.16□□□□□ -2.44
HMGB1P17-201ENST00000403495 PLNP26678 52 aa-0.16□□□□□ -2.44
HMGB1P17-201ENST00000403495 GLI2P10070 1586 aa-0.16□□□□□ -2.44
HMGB1P17-201ENST00000403495 TIAM1Q13009 1591 aa-0.16□□□□□ -2.44
HMGB1P17-201ENST00000403495 CDC42BPAQ5VT25 1732 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms