RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 A8MUN3 132 aa11.87□□□□□ -0.51
TSPAN4-207ENST00000397411 LCE2BO14633 110 aa11.81□□□□□ -0.52
TSPAN4-207ENST00000397411 KRTAP3-3Q9BYR6 98 aa11.78□□□□□ -0.52
TSPAN4-207ENST00000397411 NDUFC1O43677 76 aa11.77□□□□□ -0.53
TSPAN4-207ENST00000397411 USH2AO75445 5202 aa11.74□□□□□ -0.53
TSPAN4-207ENST00000397411 SERP2Q8N6R1 65 aa11.66□□□□□ -0.54
TSPAN4-207ENST00000397411 DMAC1Q96GE9 116 aa11.61□□□□□ -0.55
TSPAN4-207ENST00000397411 SSPOA2VEC9 5147 aa11.53□□□□□ -0.56
TSPAN4-207ENST00000397411 C20orf197Q8N268 126 aa11.53□□□□□ -0.56
TSPAN4-207ENST00000397411 SNURFQ9Y675 71 aa11.53□□□□□ -0.56
TSPAN4-207ENST00000397411 KRTAP19-1Q8IUB9 90 aa11.51□□□□□ -0.57
TSPAN4-207ENST00000397411 ACYP2P14621 99 aa11.48□□□□□ -0.57
TSPAN4-207ENST00000397411 H0YAA0 97 aa11.47□□□□□ -0.57
TSPAN4-207ENST00000397411 ADM2Q7Z4H4 148 aa11.44□□□□□ -0.58
TSPAN4-207ENST00000397411 CRIPTQ9P021 101 aa11.44□□□□□ -0.58
TSPAN4-207ENST00000397411 COX7CP15954 63 aa11.41□□□□□ -0.58
TSPAN4-207ENST00000397411 SPANXA2-OT1Q8N9U9 137 aa11.4□□□□□ -0.58
TSPAN4-207ENST00000397411 SPRR2GQ9BYE4 73 aa11.4□□□□□ -0.58
TSPAN4-207ENST00000397411 KRTAP19-6Q3LI70 58 aa11.36□□□□□ -0.59
TSPAN4-207ENST00000397411 SPTSSBQ8NFR3 76 aa11.36□□□□□ -0.59
TSPAN4-207ENST00000397411 Q5VV11 94 aa11.34□□□□□ -0.59
TSPAN4-207ENST00000397411 CHKB-CPT1BH3BT56 60 aa11.31□□□□□ -0.6
TSPAN4-207ENST00000397411 ANAPC13Q9BS18 74 aa11.28□□□□□ -0.6
TSPAN4-207ENST00000397411 FCGBPQ9Y6R7 5405 aaPredicted RBP11.27□□□□□ -0.61
TSPAN4-207ENST00000397411 KRTAP19-8Q3LI54 63 aa11.27□□□□□ -0.61
TSPAN4-207ENST00000397411 MT1BP07438 61 aa11.21□□□□□ -0.61
TSPAN4-207ENST00000397411 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.17□□□□□ -0.62
TSPAN4-207ENST00000397411 P0C880 135 aa11.16□□□□□ -0.62
TSPAN4-207ENST00000397411 R4GN34 69 aa11.14□□□□□ -0.63
TSPAN4-207ENST00000397411 H7BZZ5 65 aa11.08□□□□□ -0.64
TSPAN4-207ENST00000397411 KRTAP3-2Q9BYR7 98 aa11.08□□□□□ -0.64
TSPAN4-207ENST00000397411 A6NN06 94 aa11.07□□□□□ -0.64
TSPAN4-207ENST00000397411 M0QZ58 72 aa11.06□□□□□ -0.64
TSPAN4-207ENST00000397411 COA5Q86WW8 74 aa11.02□□□□□ -0.65
TSPAN4-207ENST00000397411 CYSTM1Q9H1C7 97 aa10.98□□□□□ -0.65
TSPAN4-207ENST00000397411 KRTAP9-7A8MTY7 169 aa10.95□□□□□ -0.66
TSPAN4-207ENST00000397411 PLAC4Q8WY50 150 aa10.95□□□□□ -0.66
TSPAN4-207ENST00000397411 CCDC179H3BU77 68 aa10.92□□□□□ -0.66
TSPAN4-207ENST00000397411 KRTAP10-5P60370 271 aa10.92□□□□□ -0.66
TSPAN4-207ENST00000397411 LINC01554Q52M75 96 aa10.92□□□□□ -0.66
TSPAN4-207ENST00000397411 ATP5EP56381 51 aaPredicted RBP10.86□□□□□ -0.67
TSPAN4-207ENST00000397411 MACF1Q9UPN3 7388 aaKnown RBP10.85□□□□□ -0.67
TSPAN4-207ENST00000397411 SEC61GP60059 68 aa10.81□□□□□ -0.68
TSPAN4-207ENST00000397411 PRO2289Q9P1D8 64 aa10.75□□□□□ -0.69
TSPAN4-207ENST00000397411 SERP1Q9Y6X1 66 aa10.74□□□□□ -0.69
TSPAN4-207ENST00000397411 SYNE2Q8WXH0 6885 aaKnown RBP10.7□□□□□ -0.7
TSPAN4-207ENST00000397411 TMEM258P61165 79 aa10.67□□□□□ -0.7
TSPAN4-207ENST00000397411 MT1XP80297 61 aa10.6□□□□□ -0.71
TSPAN4-207ENST00000397411 KRTAP6-3Q3LI67 103 aa10.59□□□□□ -0.71
TSPAN4-207ENST00000397411 KRTAP13-4Q3LI77 160 aa10.53□□□□□ -0.72
TSPAN4-207ENST00000397411 A0A1B0GU69 56 aa10.51□□□□□ -0.73
TSPAN4-207ENST00000397411 A0A1B0GU33 70 aa10.48□□□□□ -0.73
TSPAN4-207ENST00000397411 PRR15LQ9BU68 103 aa10.42□□□□□ -0.74
TSPAN4-207ENST00000397411 A0A0D9SG42 100 aa10.38□□□□□ -0.75
TSPAN4-207ENST00000397411 SPATA8Q6RVD6 105 aa10.38□□□□□ -0.75
TSPAN4-207ENST00000397411 CAMK2N1Q7Z7J9 78 aa10.34□□□□□ -0.75
TSPAN4-207ENST00000397411 KRTAP12-2P59991 146 aa10.29□□□□□ -0.76
TSPAN4-207ENST00000397411 LINC01558Q9Y6Z2 57 aa10.28□□□□□ -0.76
TSPAN4-207ENST00000397411 SMIM26A0A096LP01 95 aa10.24□□□□□ -0.77
TSPAN4-207ENST00000397411 SPINT4Q6UDR6 99 aa10.23□□□□□ -0.77
TSPAN4-207ENST00000397411 KRTAP5-9P26371 169 aa10.18□□□□□ -0.78
TSPAN4-207ENST00000397411 KRTAP8-1Q8IUC2 63 aa10.16□□□□□ -0.78
TSPAN4-207ENST00000397411 KRTAP10-7P60409 375 aaPredicted RBP10.15□□□□□ -0.78
TSPAN4-207ENST00000397411 KMT2DO14686 5537 aa10.13□□□□□ -0.79
TSPAN4-207ENST00000397411 PCP4P48539 62 aa10.12□□□□□ -0.79
TSPAN4-207ENST00000397411 V9GYY9 64 aa10.1□□□□□ -0.79
TSPAN4-207ENST00000397411 KRTAP12-1P59990 96 aa10.08□□□□□ -0.8
TSPAN4-207ENST00000397411 KRTAP10-12P60413 245 aa10.08□□□□□ -0.8
TSPAN4-207ENST00000397411 SPRR2FQ96RM1 72 aa10.07□□□□□ -0.8
TSPAN4-207ENST00000397411 KRTAP4-8A0A0G2JLE6 195 aa10.06□□□□□ -0.8
TSPAN4-207ENST00000397411 KRTAP4-8Q9BYQ9 185 aa10.06□□□□□ -0.8
TSPAN4-207ENST00000397411 A8MU10 97 aa10.05□□□□□ -0.8
TSPAN4-207ENST00000397411 MUC12Q9UKN1 5478 aa10.04□□□□□ -0.8
TSPAN4-207ENST00000397411 NEBP20929 6669 aa10.03□□□□□ -0.8
TSPAN4-207ENST00000397411 UQCR11O14957 56 aa10.02□□□□□ -0.81
TSPAN4-207ENST00000397411 Q1T7F1 81 aa9.93□□□□□ -0.82
TSPAN4-207ENST00000397411 SPRR2EP22531 72 aa9.85□□□□□ -0.83
TSPAN4-207ENST00000397411 SPRR2BP35325 72 aa9.85□□□□□ -0.83
TSPAN4-207ENST00000397411 SPRR2AP35326 72 aa9.85□□□□□ -0.83
TSPAN4-207ENST00000397411 RPS28P62857 69 aaKnown RBP9.84□□□□□ -0.83
TSPAN4-207ENST00000397411 PSPHP1O15172 72 aa9.81□□□□□ -0.84
TSPAN4-207ENST00000397411 MDN1Q9NU22 5596 aa9.81□□□□□ -0.84
TSPAN4-207ENST00000397411 MIR22HGQ0VDD5 57 aa9.8□□□□□ -0.84
TSPAN4-207ENST00000397411 LCE1AQ5T7P2 110 aa9.69□□□□□ -0.86
TSPAN4-207ENST00000397411 KRTAP20-1Q3LI63 56 aa9.68□□□□□ -0.86
TSPAN4-207ENST00000397411 K7ERS5 55 aa9.67□□□□□ -0.86
TSPAN4-207ENST00000397411 C10orf95Q9H7T3 257 aa9.61□□□□□ -0.87
TSPAN4-207ENST00000397411 A6NED7 52 aa9.59□□□□□ -0.87
TSPAN4-207ENST00000397411 TNP1P09430 55 aa9.59□□□□□ -0.87
TSPAN4-207ENST00000397411 KRTAP2-3P0C7H8 128 aa9.53□□□□□ -0.88
TSPAN4-207ENST00000397411 KRTAP2-4Q9BYR9 128 aa9.53□□□□□ -0.88
TSPAN4-207ENST00000397411 SPRR2DP22532 72 aa9.52□□□□□ -0.89
TSPAN4-207ENST00000397411 KRTAP19-7Q3SYF9 63 aa9.46□□□□□ -0.9
TSPAN4-207ENST00000397411 MT1EP04732 61 aa9.38□□□□□ -0.91
TSPAN4-207ENST00000397411 KRTAP19-5Q3LI72 72 aa9.38□□□□□ -0.91
TSPAN4-207ENST00000397411 LCE3AQ5TA76 89 aa9.35□□□□□ -0.91
TSPAN4-207ENST00000397411 KRTAP19-3Q7Z4W3 81 aa9.26□□□□□ -0.93
TSPAN4-207ENST00000397411 KRTAP25-1Q3LHN0 102 aa9.25□□□□□ -0.93
TSPAN4-207ENST00000397411 KRTAP2-2Q9BYT5 123 aa9.24□□□□□ -0.93
TSPAN4-207ENST00000397411 KRTAP2-1Q9BYU5 128 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms