RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 C4orf26Q17RF5 130 aa7.88□□□□□ -1.15
EXOSC3-202ENST00000396521 C5orf47Q569G3 176 aa7.87□□□□□ -1.15
EXOSC3-202ENST00000396521 CSAG1Q6PB30 78 aa7.86□□□□□ -1.15
EXOSC3-202ENST00000396521 TRAV22A0A0B4J277 110 aa7.85□□□□□ -1.15
EXOSC3-202ENST00000396521 MT-ATP8P03928 68 aa7.84□□□□□ -1.15
EXOSC3-202ENST00000396521 UQCRQO14949 82 aa7.83□□□□□ -1.16
EXOSC3-202ENST00000396521 SCGB1A1P11684 91 aa7.81□□□□□ -1.16
EXOSC3-202ENST00000396521 IMUPQ9GZP8 106 aa7.81□□□□□ -1.16
EXOSC3-202ENST00000396521 S4R3F8 94 aa7.8□□□□□ -1.16
EXOSC3-202ENST00000396521 H0Y9P7 68 aa7.78□□□□□ -1.16
EXOSC3-202ENST00000396521 ATOX1O00244 68 aa7.78□□□□□ -1.16
EXOSC3-202ENST00000396521 KMT2DO14686 5537 aa7.76□□□□□ -1.17
EXOSC3-202ENST00000396521 LOC101927531A0A1B0GV80 90 aa7.76□□□□□ -1.17
EXOSC3-202ENST00000396521 KLKP1Q107X0 134 aa7.75□□□□□ -1.17
EXOSC3-202ENST00000396521 OCR1Q9BZK8 76 aa7.74□□□□□ -1.17
EXOSC3-202ENST00000396521 MP68P56378 58 aa7.73□□□□□ -1.17
EXOSC3-202ENST00000396521 MDN1Q9NU22 5596 aa7.72□□□□□ -1.17
EXOSC3-202ENST00000396521 KRTAP2-3P0C7H8 128 aa7.72□□□□□ -1.17
EXOSC3-202ENST00000396521 KRTAP3-1Q9BYR8 98 aa7.72□□□□□ -1.17
EXOSC3-202ENST00000396521 KRTAP2-4Q9BYR9 128 aa7.72□□□□□ -1.17
EXOSC3-202ENST00000396521 LCA10Q71F78 164 aa7.71□□□□□ -1.18
EXOSC3-202ENST00000396521 C1orf64Q8NEQ6 169 aa7.71□□□□□ -1.18
EXOSC3-202ENST00000396521 CRIPTQ9P021 101 aa7.71□□□□□ -1.18
EXOSC3-202ENST00000396521 CYP4F30PQ9H0H9 118 aa7.69□□□□□ -1.18
EXOSC3-202ENST00000396521 LINC00208Q96KT6 92 aa7.67□□□□□ -1.18
EXOSC3-202ENST00000396521 SMIM20Q8N5G0 67 aa7.66□□□□□ -1.18
EXOSC3-202ENST00000396521 H3BPC8 53 aa7.62□□□□□ -1.19
EXOSC3-202ENST00000396521 TRAV7A0A075B6U4 112 aa7.6□□□□□ -1.19
EXOSC3-202ENST00000396521 SPRR2FQ96RM1 72 aa7.53□□□□□ -1.2
EXOSC3-202ENST00000396521 SPRR2EP22531 72 aa7.51□□□□□ -1.21
EXOSC3-202ENST00000396521 SPRR2BP35325 72 aa7.51□□□□□ -1.21
EXOSC3-202ENST00000396521 SPRR2AP35326 72 aa7.51□□□□□ -1.21
EXOSC3-202ENST00000396521 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
EXOSC3-202ENST00000396521 SERP2Q8N6R1 65 aa7.49□□□□□ -1.21
EXOSC3-202ENST00000396521 A8MUN3 132 aa7.47□□□□□ -1.21
EXOSC3-202ENST00000396521 H0YAA0 97 aa7.45□□□□□ -1.22
EXOSC3-202ENST00000396521 KRTAP2-2Q9BYT5 123 aa7.45□□□□□ -1.22
EXOSC3-202ENST00000396521 KRTAP2-1Q9BYU5 128 aa7.45□□□□□ -1.22
EXOSC3-202ENST00000396521 SNURFQ9Y675 71 aa7.43□□□□□ -1.22
EXOSC3-202ENST00000396521 C20orf197Q8N268 126 aa7.42□□□□□ -1.22
EXOSC3-202ENST00000396521 KRTAP8-1Q8IUC2 63 aa7.39□□□□□ -1.23
EXOSC3-202ENST00000396521 NDUFC1O43677 76 aa7.38□□□□□ -1.23
EXOSC3-202ENST00000396521 DMAC1Q96GE9 116 aa7.37□□□□□ -1.23
EXOSC3-202ENST00000396521 LCE1AQ5T7P2 110 aa7.36□□□□□ -1.23
EXOSC3-202ENST00000396521 COX7CP15954 63 aa7.35□□□□□ -1.23
EXOSC3-202ENST00000396521 ANAPC13Q9BS18 74 aa7.34□□□□□ -1.23
EXOSC3-202ENST00000396521 MT1XP80297 61 aa7.33□□□□□ -1.24
EXOSC3-202ENST00000396521 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
EXOSC3-202ENST00000396521 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
EXOSC3-202ENST00000396521 SPRR2DP22532 72 aa7.27□□□□□ -1.25
EXOSC3-202ENST00000396521 ACYP2P14621 99 aa7.26□□□□□ -1.25
EXOSC3-202ENST00000396521 ADM2Q7Z4H4 148 aa7.26□□□□□ -1.25
EXOSC3-202ENST00000396521 SPANXA2-OT1Q8N9U9 137 aa7.26□□□□□ -1.25
EXOSC3-202ENST00000396521 CHKB-CPT1BH3BT56 60 aa7.21□□□□□ -1.26
EXOSC3-202ENST00000396521 SPTSSBQ8NFR3 76 aa7.17□□□□□ -1.26
EXOSC3-202ENST00000396521 R4GN34 69 aa7.17□□□□□ -1.26
EXOSC3-202ENST00000396521 H7BZZ5 65 aa7.14□□□□□ -1.27
EXOSC3-202ENST00000396521 CYSTM1Q9H1C7 97 aa7.14□□□□□ -1.27
EXOSC3-202ENST00000396521 CCDC179H3BU77 68 aa7.12□□□□□ -1.27
EXOSC3-202ENST00000396521 KRTAP4-8A0A0G2JLE6 195 aa7.11□□□□□ -1.27
EXOSC3-202ENST00000396521 LCE3BQ5TA77 95 aa7.11□□□□□ -1.27
EXOSC3-202ENST00000396521 KRTAP4-8Q9BYQ9 185 aa7.11□□□□□ -1.27
EXOSC3-202ENST00000396521 COA5Q86WW8 74 aa7.06□□□□□ -1.28
EXOSC3-202ENST00000396521 M0QZ58 72 aa7.04□□□□□ -1.28
EXOSC3-202ENST00000396521 P0C880 135 aa7.01□□□□□ -1.29
EXOSC3-202ENST00000396521 KRTAP10-12P60413 245 aa7□□□□□ -1.29
EXOSC3-202ENST00000396521 ATP5EP56381 51 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-202ENST00000396521 KRTAP10-7P60409 375 aaPredicted RBP6.95□□□□□ -1.3
EXOSC3-202ENST00000396521 LINC01554Q52M75 96 aa6.95□□□□□ -1.3
EXOSC3-202ENST00000396521 TMEM258P61165 79 aa6.93□□□□□ -1.3
EXOSC3-202ENST00000396521 SEC61GP60059 68 aa6.85□□□□□ -1.31
EXOSC3-202ENST00000396521 GPR98Q8WXG9 6306 aa6.84□□□□□ -1.31
EXOSC3-202ENST00000396521 SERP1Q9Y6X1 66 aa6.81□□□□□ -1.32
EXOSC3-202ENST00000396521 DSTQ03001 7570 aaKnown RBP6.75□□□□□ -1.33
EXOSC3-202ENST00000396521 A0A1B0GU69 56 aa6.72□□□□□ -1.33
EXOSC3-202ENST00000396521 PCP4P48539 62 aa6.72□□□□□ -1.33
EXOSC3-202ENST00000396521 LCE5AQ5TCM9 118 aa6.67□□□□□ -1.34
EXOSC3-202ENST00000396521 PRR15LQ9BU68 103 aa6.66□□□□□ -1.34
EXOSC3-202ENST00000396521 KRTAP4-9Q9BYQ8 210 aa6.66□□□□□ -1.34
EXOSC3-202ENST00000396521 A0A1B0GU33 70 aa6.64□□□□□ -1.35
EXOSC3-202ENST00000396521 KRTAP13-4Q3LI77 160 aa6.62□□□□□ -1.35
EXOSC3-202ENST00000396521 KRTAP19-3Q7Z4W3 81 aa6.59□□□□□ -1.35
EXOSC3-202ENST00000396521 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
EXOSC3-202ENST00000396521 KRTAP19-7Q3SYF9 63 aa6.56□□□□□ -1.36
EXOSC3-202ENST00000396521 SPATA8Q6RVD6 105 aa6.56□□□□□ -1.36
EXOSC3-202ENST00000396521 A0A0D9SG42 100 aa6.54□□□□□ -1.36
EXOSC3-202ENST00000396521 MT1EP04732 61 aa6.53□□□□□ -1.36
EXOSC3-202ENST00000396521 CAMK2N1Q7Z7J9 78 aa6.53□□□□□ -1.36
EXOSC3-202ENST00000396521 LCE1DQ5T752 114 aa6.5□□□□□ -1.37
EXOSC3-202ENST00000396521 V9GYY9 64 aa6.49□□□□□ -1.37
EXOSC3-202ENST00000396521 SMIM26A0A096LP01 95 aa6.48□□□□□ -1.37
EXOSC3-202ENST00000396521 LCE4AQ5TA78 99 aa6.47□□□□□ -1.37
EXOSC3-202ENST00000396521 MT1GP13640 62 aa6.44□□□□□ -1.38
EXOSC3-202ENST00000396521 SPINT4Q6UDR6 99 aa6.43□□□□□ -1.38
EXOSC3-202ENST00000396521 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
EXOSC3-202ENST00000396521 UQCR11O14957 56 aa6.4□□□□□ -1.38
EXOSC3-202ENST00000396521 Q1T7F1 81 aa6.4□□□□□ -1.38
EXOSC3-202ENST00000396521 A8MU10 97 aa6.39□□□□□ -1.39
EXOSC3-202ENST00000396521 HMCN1Q96RW7 5635 aa6.38□□□□□ -1.39
EXOSC3-202ENST00000396521 PSPHP1O15172 72 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 398.2 ms