RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.05
PDE1C-202ENST00000396182 KMT2CQ8NEZ4 4911 aaKnown RBP8.38□□□□□ -1.07
PDE1C-202ENST00000396182 FAT3Q8TDW7 4589 aa8.38□□□□□ -1.07
PDE1C-202ENST00000396182 RYR2Q92736 4967 aa8.36□□□□□ -1.07
PDE1C-202ENST00000396182 LRP1Q07954 4544 aaKnown RBP8.36□□□□□ -1.07
PDE1C-202ENST00000396182 KRTAP23-1A1A580 65 aa8.33□□□□□ -1.08
PDE1C-202ENST00000396182 P0C880 135 aa8.31□□□□□ -1.08
PDE1C-202ENST00000396182 TNXBP22105 4242 aa8.31□□□□□ -1.08
PDE1C-202ENST00000396182 KRTAP10-6P60371 365 aaPredicted RBP8.31□□□□□ -1.08
PDE1C-202ENST00000396182 RPL37P61927 97 aaKnown RBP8.3□□□□□ -1.08
PDE1C-202ENST00000396182 HSPG2P98160 4391 aa8.29□□□□□ -1.08
PDE1C-202ENST00000396182 KRTAP13-4Q3LI77 160 aa8.29□□□□□ -1.08
PDE1C-202ENST00000396182 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
PDE1C-202ENST00000396182 A0A0D9SG42 100 aa8.24□□□□□ -1.09
PDE1C-202ENST00000396182 MYCBP2O75592 4640 aa8.23□□□□□ -1.09
PDE1C-202ENST00000396182 TPRXLQ17RH7 258 aa8.23□□□□□ -1.09
PDE1C-202ENST00000396182 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
PDE1C-202ENST00000396182 KRTAP10-8P60410 259 aa8.21□□□□□ -1.1
PDE1C-202ENST00000396182 DMBT1Q9UGM3 2413 aaPredicted RBP8.2□□□□□ -1.1
PDE1C-202ENST00000396182 SPINT4Q6UDR6 99 aa8.14□□□□□ -1.11
PDE1C-202ENST00000396182 XP32Q5T750 250 aa8.13□□□□□ -1.11
PDE1C-202ENST00000396182 C10orf95Q9H7T3 257 aa8.13□□□□□ -1.11
PDE1C-202ENST00000396182 S4R3F8 94 aa8.12□□□□□ -1.11
PDE1C-202ENST00000396182 RYR3Q15413 4870 aa8.11□□□□□ -1.11
PDE1C-202ENST00000396182 Q5VSD8 79 aa8.1□□□□□ -1.11
PDE1C-202ENST00000396182 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
PDE1C-202ENST00000396182 KRTAP12-2P59991 146 aa8.04□□□□□ -1.12
PDE1C-202ENST00000396182 KRTAP17-1Q9BYP8 105 aa8.04□□□□□ -1.12
PDE1C-202ENST00000396182 LPAP08519 4548 aa8.02□□□□□ -1.13
PDE1C-202ENST00000396182 KRTAP15-1Q3LI76 137 aa8.01□□□□□ -1.13
PDE1C-202ENST00000396182 RYR1P21817 5038 aa8□□□□□ -1.13
PDE1C-202ENST00000396182 NDUFAF8A1L188 74 aa7.98□□□□□ -1.13
PDE1C-202ENST00000396182 KRTAP12-1P59990 96 aa7.96□□□□□ -1.14
PDE1C-202ENST00000396182 MT1HL1P0DM35 61 aa7.93□□□□□ -1.14
PDE1C-202ENST00000396182 KIAA1109Q2LD37 5005 aa7.92□□□□□ -1.14
PDE1C-202ENST00000396182 LRP2P98164 4655 aa7.91□□□□□ -1.14
PDE1C-202ENST00000396182 EPPK1P58107 5090 aaKnown RBP7.82□□□□□ -1.16
PDE1C-202ENST00000396182 M0QZ58 72 aa7.8□□□□□ -1.16
PDE1C-202ENST00000396182 ABCA13Q86UQ4 5058 aa7.7□□□□□ -1.18
PDE1C-202ENST00000396182 LCE2DQ5TA82 110 aaPredicted RBP7.66□□□□□ -1.18
PDE1C-202ENST00000396182 KRTAP4-5Q9BYR2 181 aa7.56□□□□□ -1.2
PDE1C-202ENST00000396182 MUC17Q685J3 4493 aa7.55□□□□□ -1.2
PDE1C-202ENST00000396182 R4GN34 69 aa7.54□□□□□ -1.2
PDE1C-202ENST00000396182 LORP23490 312 aaPredicted RBP7.48□□□□□ -1.21
PDE1C-202ENST00000396182 PLAC4Q8WY50 150 aa7.48□□□□□ -1.21
PDE1C-202ENST00000396182 LCE2AQ5TA79 106 aaPredicted RBP7.46□□□□□ -1.22
PDE1C-202ENST00000396182 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
PDE1C-202ENST00000396182 LCE2CQ5TA81 110 aa7.42□□□□□ -1.22
PDE1C-202ENST00000396182 HERC2O95714 4834 aa7.36□□□□□ -1.23
PDE1C-202ENST00000396182 KRTAP19-2Q3LHN2 52 aa7.32□□□□□ -1.24
PDE1C-202ENST00000396182 PP632Q6XCG6 107 aa7.27□□□□□ -1.25
PDE1C-202ENST00000396182 MUC2Q02817 5179 aa7.26□□□□□ -1.25
PDE1C-202ENST00000396182 BIRC6Q9NR09 4857 aa7.18□□□□□ -1.26
PDE1C-202ENST00000396182 PRO2289Q9P1D8 64 aa7.15□□□□□ -1.26
PDE1C-202ENST00000396182 FLGP20930 4061 aaPredicted RBP7.13□□□□□ -1.27
PDE1C-202ENST00000396182 HERC1Q15751 4861 aa7.1□□□□□ -1.27
PDE1C-202ENST00000396182 PCLOQ9Y6V0 5065 aa7.08□□□□□ -1.28
PDE1C-202ENST00000396182 LCE2BO14633 110 aa7.07□□□□□ -1.28
PDE1C-202ENST00000396182 TNP1P09430 55 aa6.97□□□□□ -1.29
PDE1C-202ENST00000396182 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
PDE1C-202ENST00000396182 HMCN2Q8NDA2 5059 aa6.92□□□□□ -1.3
PDE1C-202ENST00000396182 FAT4Q6V0I7 4981 aa6.9□□□□□ -1.31
PDE1C-202ENST00000396182 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
PDE1C-202ENST00000396182 SPRR2GQ9BYE4 73 aa6.74□□□□□ -1.33
PDE1C-202ENST00000396182 RNF213Q63HN8 5207 aa6.72□□□□□ -1.33
PDE1C-202ENST00000396182 UBR4Q5T4S7 5183 aa6.69□□□□□ -1.34
PDE1C-202ENST00000396182 M0R2T5 61 aa6.65□□□□□ -1.34
PDE1C-202ENST00000396182 MT1HP80294 61 aa6.62□□□□□ -1.35
PDE1C-202ENST00000396182 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
PDE1C-202ENST00000396182 MT1FP04733 61 aa6.56□□□□□ -1.36
PDE1C-202ENST00000396182 MT2AP02795 61 aa6.55□□□□□ -1.36
PDE1C-202ENST00000396182 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
PDE1C-202ENST00000396182 INE1O15225 51 aa6.52□□□□□ -1.36
PDE1C-202ENST00000396182 KRTAP9-8Q9BYQ0 159 aa6.5□□□□□ -1.37
PDE1C-202ENST00000396182 KRTAP8-1Q8IUC2 63 aa6.42□□□□□ -1.38
PDE1C-202ENST00000396182 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
PDE1C-202ENST00000396182 MT1BP07438 61 aa6.36□□□□□ -1.39
PDE1C-202ENST00000396182 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
PDE1C-202ENST00000396182 MT1XP80297 61 aa6.34□□□□□ -1.39
PDE1C-202ENST00000396182 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
PDE1C-202ENST00000396182 KRTAP10-12P60413 245 aa6.21□□□□□ -1.41
PDE1C-202ENST00000396182 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.41
PDE1C-202ENST00000396182 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
PDE1C-202ENST00000396182 USH2AO75445 5202 aa5.97□□□□□ -1.45
PDE1C-202ENST00000396182 KMT2DO14686 5537 aa5.94□□□□□ -1.46
PDE1C-202ENST00000396182 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
PDE1C-202ENST00000396182 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
PDE1C-202ENST00000396182 KRTAP4-8A0A0G2JLE6 195 aa5.83□□□□□ -1.48
PDE1C-202ENST00000396182 KRTAP4-8Q9BYQ9 185 aa5.83□□□□□ -1.48
PDE1C-202ENST00000396182 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
PDE1C-202ENST00000396182 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
PDE1C-202ENST00000396182 KRTAP2-2Q9BYT5 123 aa5.72□□□□□ -1.49
PDE1C-202ENST00000396182 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
PDE1C-202ENST00000396182 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
PDE1C-202ENST00000396182 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
PDE1C-202ENST00000396182 KRTAP2-1Q9BYU5 128 aa5.66□□□□□ -1.5
PDE1C-202ENST00000396182 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
PDE1C-202ENST00000396182 FSIP2Q5CZC0 6907 aa5.57□□□□□ -1.52
PDE1C-202ENST00000396182 MT1LQ93083 61 aa5.48□□□□□ -1.53
PDE1C-202ENST00000396182 SSPOA2VEC9 5147 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms