RNA–Protein interactions for RNA: ENST00000392662.5

ACTL6A-201, Transcript of actin like 6A, humanhuman

TSL 2 BASIC

Gene ACTL6A, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-201ENST00000392662 RBM12B-AS1Q9P1G2 102 aa9.81□□□□□ -0.84
ACTL6A-201ENST00000392662 Q5VV11 94 aa9.8□□□□□ -0.84
ACTL6A-201ENST00000392662 H1FX-AS1Q4G0G2 97 aa9.74□□□□□ -0.85
ACTL6A-201ENST00000392662 MUC2Q02817 5179 aa9.74□□□□□ -0.85
ACTL6A-201ENST00000392662 PRR15LQ9BU68 103 aa9.72□□□□□ -0.85
ACTL6A-201ENST00000392662 LINC01558Q9Y6Z2 57 aa9.7□□□□□ -0.86
ACTL6A-201ENST00000392662 SPTSSBQ8NFR3 76 aa9.69□□□□□ -0.86
ACTL6A-201ENST00000392662 LCA10Q71F78 164 aa9.67□□□□□ -0.86
ACTL6A-201ENST00000392662 S4R3F8 94 aa9.66□□□□□ -0.86
ACTL6A-201ENST00000392662 PMAIP1Q13794 54 aa9.66□□□□□ -0.86
ACTL6A-201ENST00000392662 KRTAP3-3Q9BYR6 98 aa9.66□□□□□ -0.86
ACTL6A-201ENST00000392662 UBR4Q5T4S7 5183 aa9.65□□□□□ -0.87
ACTL6A-201ENST00000392662 KRTAP19-2Q3LHN2 52 aa9.62□□□□□ -0.87
ACTL6A-201ENST00000392662 A6NED7 52 aa9.57□□□□□ -0.88
ACTL6A-201ENST00000392662 A8MU10 97 aa9.57□□□□□ -0.88
ACTL6A-201ENST00000392662 RNF213Q63HN8 5207 aa9.54□□□□□ -0.88
ACTL6A-201ENST00000392662 CDC42SE1Q9NRR8 79 aa9.53□□□□□ -0.88
ACTL6A-201ENST00000392662 A0A1B0GU69 56 aa9.53□□□□□ -0.88
ACTL6A-201ENST00000392662 SEC61GP60059 68 aa9.49□□□□□ -0.89
ACTL6A-201ENST00000392662 CSAG1Q6PB30 78 aa9.45□□□□□ -0.9
ACTL6A-201ENST00000392662 KTN1-AS1Q86SY8 53 aa9.42□□□□□ -0.9
ACTL6A-201ENST00000392662 A6NN06 94 aa9.41□□□□□ -0.9
ACTL6A-201ENST00000392662 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
ACTL6A-201ENST00000392662 LCE2CQ5TA81 110 aa9.38□□□□□ -0.91
ACTL6A-201ENST00000392662 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
ACTL6A-201ENST00000392662 KRTAP10-6P60371 365 aaPredicted RBP9.31□□□□□ -0.92
ACTL6A-201ENST00000392662 FAT4Q6V0I7 4981 aa9.3□□□□□ -0.92
ACTL6A-201ENST00000392662 H0YAA0 97 aa9.25□□□□□ -0.93
ACTL6A-201ENST00000392662 ADM2Q7Z4H4 148 aa9.25□□□□□ -0.93
ACTL6A-201ENST00000392662 UQCR11O14957 56 aa9.25□□□□□ -0.93
ACTL6A-201ENST00000392662 A0A1B0GU33 70 aa9.24□□□□□ -0.93
ACTL6A-201ENST00000392662 P0C880 135 aa9.23□□□□□ -0.93
ACTL6A-201ENST00000392662 MT1HP80294 61 aa9.17□□□□□ -0.94
ACTL6A-201ENST00000392662 SPATA8Q6RVD6 105 aa9.15□□□□□ -0.94
ACTL6A-201ENST00000392662 MIR22HGQ0VDD5 57 aa9.15□□□□□ -0.95
ACTL6A-201ENST00000392662 M0R2T5 61 aa9.06□□□□□ -0.96
ACTL6A-201ENST00000392662 KRTAP13-4Q3LI77 160 aa9.06□□□□□ -0.96
ACTL6A-201ENST00000392662 M0QZ58 72 aa8.98□□□□□ -0.97
ACTL6A-201ENST00000392662 LORP23490 312 aaPredicted RBP8.98□□□□□ -0.97
ACTL6A-201ENST00000392662 R4GN34 69 aa8.92□□□□□ -0.98
ACTL6A-201ENST00000392662 PRAC1Q96KF2 57 aa8.88□□□□□ -0.99
ACTL6A-201ENST00000392662 A0A0D9SG42 100 aa8.87□□□□□ -0.99
ACTL6A-201ENST00000392662 KRTAP9-8Q9BYQ0 159 aa8.85□□□□□ -0.99
ACTL6A-201ENST00000392662 CRIPTQ9P021 101 aa8.83□□□□□ -1
ACTL6A-201ENST00000392662 MT2AP02795 61 aa8.81□□□□□ -1
ACTL6A-201ENST00000392662 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
ACTL6A-201ENST00000392662 LCE2AQ5TA79 106 aaPredicted RBP8.79□□□□□ -1
ACTL6A-201ENST00000392662 MT1FP04733 61 aa8.77□□□□□ -1.01
ACTL6A-201ENST00000392662 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
ACTL6A-201ENST00000392662 KRTAP10-10P60014 251 aa8.74□□□□□ -1.01
ACTL6A-201ENST00000392662 KRTAP12-1P59990 96 aa8.7□□□□□ -1.02
ACTL6A-201ENST00000392662 K7ERS5 55 aa8.7□□□□□ -1.02
ACTL6A-201ENST00000392662 KRTAP12-2P59991 146 aa8.69□□□□□ -1.02
ACTL6A-201ENST00000392662 SPRR2GQ9BYE4 73 aa8.66□□□□□ -1.02
ACTL6A-201ENST00000392662 SPINT4Q6UDR6 99 aa8.66□□□□□ -1.02
ACTL6A-201ENST00000392662 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
ACTL6A-201ENST00000392662 KRTAP9-3Q9BYQ3 159 aa8.53□□□□□ -1.04
ACTL6A-201ENST00000392662 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
ACTL6A-201ENST00000392662 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
ACTL6A-201ENST00000392662 ROMO1P60602 79 aa8.37□□□□□ -1.07
ACTL6A-201ENST00000392662 CAMK2N1Q7Z7J9 78 aa8.35□□□□□ -1.07
ACTL6A-201ENST00000392662 PLAC4Q8WY50 150 aa8.35□□□□□ -1.07
ACTL6A-201ENST00000392662 MT1BP07438 61 aa8.31□□□□□ -1.08
ACTL6A-201ENST00000392662 LCE2BO14633 110 aa8.29□□□□□ -1.08
ACTL6A-201ENST00000392662 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
ACTL6A-201ENST00000392662 USH2AO75445 5202 aa8.11□□□□□ -1.11
ACTL6A-201ENST00000392662 MT1XP80297 61 aa8.06□□□□□ -1.12
ACTL6A-201ENST00000392662 KRTAP10-5P60370 271 aa8.04□□□□□ -1.12
ACTL6A-201ENST00000392662 H3BS24 57 aa8.03□□□□□ -1.12
ACTL6A-201ENST00000392662 TNP1P09430 55 aa7.96□□□□□ -1.14
ACTL6A-201ENST00000392662 PRO2289Q9P1D8 64 aa7.93□□□□□ -1.14
ACTL6A-201ENST00000392662 FSIP2Q5CZC0 6907 aa7.85□□□□□ -1.15
ACTL6A-201ENST00000392662 SSPOA2VEC9 5147 aa7.84□□□□□ -1.15
ACTL6A-201ENST00000392662 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
ACTL6A-201ENST00000392662 KRTAP15-1Q3LI76 137 aa7.75□□□□□ -1.17
ACTL6A-201ENST00000392662 KRTAP10-7P60409 375 aaPredicted RBP7.74□□□□□ -1.17
ACTL6A-201ENST00000392662 PP632Q6XCG6 107 aa7.73□□□□□ -1.17
ACTL6A-201ENST00000392662 KRTAP23-1A1A580 65 aa7.72□□□□□ -1.17
ACTL6A-201ENST00000392662 KRTAP10-12P60413 245 aa7.64□□□□□ -1.19
ACTL6A-201ENST00000392662 LCE3AQ5TA76 89 aa7.63□□□□□ -1.19
ACTL6A-201ENST00000392662 KRTAP9-2Q9BYQ4 174 aa7.62□□□□□ -1.19
ACTL6A-201ENST00000392662 NDUFAF8A1L188 74 aa7.52□□□□□ -1.21
ACTL6A-201ENST00000392662 FCGBPQ9Y6R7 5405 aaPredicted RBP7.52□□□□□ -1.21
ACTL6A-201ENST00000392662 KMT2DO14686 5537 aa7.49□□□□□ -1.21
ACTL6A-201ENST00000392662 KRTAP8-1Q8IUC2 63 aa7.48□□□□□ -1.21
ACTL6A-201ENST00000392662 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
ACTL6A-201ENST00000392662 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
ACTL6A-201ENST00000392662 LOC100996750A0A140TA64 210 aa7.37□□□□□ -1.23
ACTL6A-201ENST00000392662 KRTAP4-6Q9BYQ5 205 aa7.37□□□□□ -1.23
ACTL6A-201ENST00000392662 CRCT1Q9UGL9 99 aa7.35□□□□□ -1.23
ACTL6A-201ENST00000392662 KRTAP12-3P60328 96 aa7.32□□□□□ -1.24
ACTL6A-201ENST00000392662 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
ACTL6A-201ENST00000392662 KRTAP19-7Q3SYF9 63 aa7.19□□□□□ -1.26
ACTL6A-201ENST00000392662 MACF1Q9UPN3 7388 aaKnown RBP7.16□□□□□ -1.26
ACTL6A-201ENST00000392662 LUZP6Q538Z0 58 aa7.06□□□□□ -1.28
ACTL6A-201ENST00000392662 MT1EP04732 61 aa7.05□□□□□ -1.28
ACTL6A-201ENST00000392662 SYNE2Q8WXH0 6885 aaKnown RBP6.99□□□□□ -1.29
ACTL6A-201ENST00000392662 KRTAP9-6A0A140TA67 174 aa6.98□□□□□ -1.29
ACTL6A-201ENST00000392662 MT1LQ93083 61 aa6.92□□□□□ -1.3
ACTL6A-201ENST00000392662 MUC12Q9UKN1 5478 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms