RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 GNGT1P63211 74 aa2.56□□□□□ -2
TRAV35-201ENST00000390462 DEFB1P60022 68 aa2.55□□□□□ -2
TRAV35-201ENST00000390462 ATP5EP2Q5VTU8 51 aa2.55□□□□□ -2
TRAV35-201ENST00000390462 TMEM167AQ8TBQ9 72 aa2.55□□□□□ -2
TRAV35-201ENST00000390462 K7EIM0 57 aa2.54□□□□□ -2
TRAV35-201ENST00000390462 S100ZQ8WXG8 99 aa2.54□□□□□ -2
TRAV35-201ENST00000390462 A0A1B0GUT8 65 aa2.53□□□□□ -2
TRAV35-201ENST00000390462 WT1-ASQ06250 92 aa2.53□□□□□ -2
TRAV35-201ENST00000390462 A0A096LPF7 62 aa2.52□□□□□ -2.01
TRAV35-201ENST00000390462 TRBV7-4A0A0J9YYF1 115 aa2.52□□□□□ -2.01
TRAV35-201ENST00000390462 TRBV6-1A0A0K0K1D8 114 aa2.52□□□□□ -2.01
TRAV35-201ENST00000390462 H3BNG1 76 aa2.5□□□□□ -2.01
TRAV35-201ENST00000390462 I3L2K1 104 aa2.5□□□□□ -2.01
TRAV35-201ENST00000390462 WFDC10BQ8IUB3 73 aa2.5□□□□□ -2.01
TRAV35-201ENST00000390462 A0A087WXM4 84 aa2.49□□□□□ -2.01
TRAV35-201ENST00000390462 IFI27P40305 119 aaPredicted RBP2.49□□□□□ -2.01
TRAV35-201ENST00000390462 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
TRAV35-201ENST00000390462 NOP10Q9NPE3 64 aaKnown RBP2.49□□□□□ -2.01
TRAV35-201ENST00000390462 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
TRAV35-201ENST00000390462 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
TRAV35-201ENST00000390462 ARHGAP5-AS1Q96IT6 56 aa2.48□□□□□ -2.01
TRAV35-201ENST00000390462 TIMM8BQ9Y5J9 83 aaPredicted RBP2.48□□□□□ -2.01
TRAV35-201ENST00000390462 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
TRAV35-201ENST00000390462 A8MTW9 85 aa2.47□□□□□ -2.01
TRAV35-201ENST00000390462 A0A087WWC5 75 aa2.46□□□□□ -2.02
TRAV35-201ENST00000390462 HTN1P15515 57 aa2.46□□□□□ -2.02
TRAV35-201ENST00000390462 PRCDQ00LT1 54 aa2.46□□□□□ -2.02
TRAV35-201ENST00000390462 A0A1B0GU69 56 aa2.45□□□□□ -2.02
TRAV35-201ENST00000390462 NEBP20929 6669 aa2.44□□□□□ -2.02
TRAV35-201ENST00000390462 SPINK9Q5DT21 86 aa2.44□□□□□ -2.02
TRAV35-201ENST00000390462 MUC17Q685J3 4493 aa2.44□□□□□ -2.02
TRAV35-201ENST00000390462 COX8AP10176 69 aa2.43□□□□□ -2.02
TRAV35-201ENST00000390462 SSPOA2VEC9 5147 aa2.42□□□□□ -2.02
TRAV35-201ENST00000390462 LINC01556Q5JQF7 62 aa2.42□□□□□ -2.02
TRAV35-201ENST00000390462 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
TRAV35-201ENST00000390462 SSBP3-AS1Q7Z2R9 100 aa2.41□□□□□ -2.02
TRAV35-201ENST00000390462 PRO0255Q9UI72 69 aa2.41□□□□□ -2.02
TRAV35-201ENST00000390462 NDUFB1O75438 58 aa2.4□□□□□ -2.03
TRAV35-201ENST00000390462 ANGP03950 147 aaKnown RBP2.4□□□□□ -2.03
TRAV35-201ENST00000390462 KRTAP12-3P60328 96 aa2.4□□□□□ -2.03
TRAV35-201ENST00000390462 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
TRAV35-201ENST00000390462 TRAV21A0A0B4J279 112 aa2.39□□□□□ -2.03
TRAV35-201ENST00000390462 H3BVH4 76 aa2.39□□□□□ -2.03
TRAV35-201ENST00000390462 SPINK4O60575 86 aa2.39□□□□□ -2.03
TRAV35-201ENST00000390462 USH2AO75445 5202 aa2.38□□□□□ -2.03
TRAV35-201ENST00000390462 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
TRAV35-201ENST00000390462 SFTA3P0C7M3 94 aa2.38□□□□□ -2.03
TRAV35-201ENST00000390462 SPINK6Q6UWN8 80 aa2.37□□□□□ -2.03
TRAV35-201ENST00000390462 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
TRAV35-201ENST00000390462 FXYD6Q9H0Q3 95 aa2.36□□□□□ -2.03
TRAV35-201ENST00000390462 FCGBPQ9Y6R7 5405 aaPredicted RBP2.35□□□□□ -2.03
TRAV35-201ENST00000390462 LINC00959A0A1B0GUT2 108 aa2.35□□□□□ -2.03
TRAV35-201ENST00000390462 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
TRAV35-201ENST00000390462 SNRPGP15A8MWD9 76 aa2.33□□□□□ -2.04
TRAV35-201ENST00000390462 GNG13Q9P2W3 67 aa2.32□□□□□ -2.04
TRAV35-201ENST00000390462 NREPQ16612 68 aa2.31□□□□□ -2.04
TRAV35-201ENST00000390462 KRTAP20-1Q3LI63 56 aa2.31□□□□□ -2.04
TRAV35-201ENST00000390462 C3orf79P0CE67 100 aa2.3□□□□□ -2.04
TRAV35-201ENST00000390462 ATXN8Q156A1 80 aa2.3□□□□□ -2.04
TRAV35-201ENST00000390462 KRTAP4-1Q9BYQ7 146 aa2.3□□□□□ -2.04
TRAV35-201ENST00000390462 ENHOQ6UWT2 76 aa2.29□□□□□ -2.04
TRAV35-201ENST00000390462 FXYD6-FXYD2A0A087WZ82 144 aa2.28□□□□□ -2.04
TRAV35-201ENST00000390462 COX7BP24311 80 aa2.28□□□□□ -2.04
TRAV35-201ENST00000390462 MT1HP80294 61 aa2.28□□□□□ -2.04
TRAV35-201ENST00000390462 COX6A2Q02221 97 aa2.28□□□□□ -2.04
TRAV35-201ENST00000390462 A0A096LNI7 61 aa2.26□□□□□ -2.05
TRAV35-201ENST00000390462 CLPSL2Q6UWE3 100 aa2.26□□□□□ -2.05
TRAV35-201ENST00000390462 IAPPP10997 89 aa2.25□□□□□ -2.05
TRAV35-201ENST00000390462 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
TRAV35-201ENST00000390462 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
TRAV35-201ENST00000390462 FLGP20930 4061 aaPredicted RBP2.24□□□□□ -2.05
TRAV35-201ENST00000390462 TP53AIP1Q9HCN2 124 aa2.23□□□□□ -2.05
TRAV35-201ENST00000390462 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
TRAV35-201ENST00000390462 KMT2DO14686 5537 aa2.21□□□□□ -2.06
TRAV35-201ENST00000390462 MUC12Q9UKN1 5478 aa2.21□□□□□ -2.06
TRAV35-201ENST00000390462 M0R2T5 61 aa2.19□□□□□ -2.06
TRAV35-201ENST00000390462 ARL14EPLP0DKL9 152 aa2.19□□□□□ -2.06
TRAV35-201ENST00000390462 CNFNQ9BYD5 112 aa2.19□□□□□ -2.06
TRAV35-201ENST00000390462 A0A0D9SG42 100 aa2.18□□□□□ -2.06
TRAV35-201ENST00000390462 KRTAP4-3Q9BYR4 195 aa2.13□□□□□ -2.07
TRAV35-201ENST00000390462 NMES1Q9C002 83 aa2.13□□□□□ -2.07
TRAV35-201ENST00000390462 CRIPTQ9P021 101 aa2.13□□□□□ -2.07
TRAV35-201ENST00000390462 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
TRAV35-201ENST00000390462 LINC01549A6NIU2 74 aa2.12□□□□□ -2.07
TRAV35-201ENST00000390462 K7EQZ3 153 aa2.11□□□□□ -2.07
TRAV35-201ENST00000390462 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
TRAV35-201ENST00000390462 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
TRAV35-201ENST00000390462 COX6B2Q6YFQ2 88 aa2.09□□□□□ -2.07
TRAV35-201ENST00000390462 I3L3M4 83 aa2.08□□□□□ -2.08
TRAV35-201ENST00000390462 KRTAP19-6Q3LI70 58 aa2.08□□□□□ -2.08
TRAV35-201ENST00000390462 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
TRAV35-201ENST00000390462 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
TRAV35-201ENST00000390462 UBL5Q9BZL1 73 aa2.07□□□□□ -2.08
TRAV35-201ENST00000390462 CRIP1P50238 77 aa2.06□□□□□ -2.08
TRAV35-201ENST00000390462 Q8IZM0 81 aa2.06□□□□□ -2.08
TRAV35-201ENST00000390462 M0QY20 66 aa2.05□□□□□ -2.08
TRAV35-201ENST00000390462 MT2AP02795 61 aa2.04□□□□□ -2.08
TRAV35-201ENST00000390462 MT1FP04733 61 aa2.04□□□□□ -2.08
TRAV35-201ENST00000390462 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
TRAV35-201ENST00000390462 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms