RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 KMT2DO14686 5537 aa7.54□□□□□ -1.2
HMGN1-204ENST00000380749 F8W1H4 67 aa7.54□□□□□ -1.2
HMGN1-204ENST00000380749 ETDBQ3ZM63 59 aa7.54□□□□□ -1.2
HMGN1-204ENST00000380749 A0A087WVE0 104 aa7.52□□□□□ -1.21
HMGN1-204ENST00000380749 KRTAP5-9P26371 169 aa7.51□□□□□ -1.21
HMGN1-204ENST00000380749 KRTAP20-1Q3LI63 56 aa7.48□□□□□ -1.21
HMGN1-204ENST00000380749 NDUFC1O43677 76 aa7.47□□□□□ -1.21
HMGN1-204ENST00000380749 H0YAA0 97 aa7.45□□□□□ -1.22
HMGN1-204ENST00000380749 ATOX1O00244 68 aa7.45□□□□□ -1.22
HMGN1-204ENST00000380749 ATP5EP2Q5VTU8 51 aa7.44□□□□□ -1.22
HMGN1-204ENST00000380749 H0Y9P7 68 aa7.43□□□□□ -1.22
HMGN1-204ENST00000380749 UQCRQO14949 82 aa7.43□□□□□ -1.22
HMGN1-204ENST00000380749 ACYP1P07311 99 aa7.42□□□□□ -1.22
HMGN1-204ENST00000380749 HIST1H4AP62805 103 aaKnown RBP7.41□□□□□ -1.22
HMGN1-204ENST00000380749 A8MUN3 132 aa7.38□□□□□ -1.23
HMGN1-204ENST00000380749 FAM240AA0A1B0GVK7 77 aa7.36□□□□□ -1.23
HMGN1-204ENST00000380749 ADM2Q7Z4H4 148 aa7.35□□□□□ -1.23
HMGN1-204ENST00000380749 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.23
HMGN1-204ENST00000380749 PCP4L1A6NKN8 68 aa7.33□□□□□ -1.24
HMGN1-204ENST00000380749 LINC00208Q96KT6 92 aa7.27□□□□□ -1.25
HMGN1-204ENST00000380749 PLAC4Q8WY50 150 aa7.26□□□□□ -1.25
HMGN1-204ENST00000380749 SPRR2FQ96RM1 72 aa7.26□□□□□ -1.25
HMGN1-204ENST00000380749 MP68P56378 58 aa7.24□□□□□ -1.25
HMGN1-204ENST00000380749 MT1XP80297 61 aa7.24□□□□□ -1.25
HMGN1-204ENST00000380749 R4GN34 69 aa7.22□□□□□ -1.25
HMGN1-204ENST00000380749 KRTAP2-3P0C7H8 128 aa7.21□□□□□ -1.25
HMGN1-204ENST00000380749 LINC00643Q86TS7 51 aa7.21□□□□□ -1.25
HMGN1-204ENST00000380749 C20orf197Q8N268 126 aa7.21□□□□□ -1.25
HMGN1-204ENST00000380749 KRTAP2-4Q9BYR9 128 aa7.21□□□□□ -1.25
HMGN1-204ENST00000380749 SPRR2EP22531 72 aa7.2□□□□□ -1.26
HMGN1-204ENST00000380749 SPRR2BP35325 72 aa7.2□□□□□ -1.26
HMGN1-204ENST00000380749 SPRR2AP35326 72 aa7.2□□□□□ -1.26
HMGN1-204ENST00000380749 KRTAP8-1Q8IUC2 63 aa7.17□□□□□ -1.26
HMGN1-204ENST00000380749 OCR1Q9BZK8 76 aa7.17□□□□□ -1.26
HMGN1-204ENST00000380749 M0QZ58 72 aa7.14□□□□□ -1.27
HMGN1-204ENST00000380749 P0C880 135 aa7.13□□□□□ -1.27
HMGN1-204ENST00000380749 KRTAP12-2P59991 146 aa7.13□□□□□ -1.27
HMGN1-204ENST00000380749 H3BPC8 53 aa7.09□□□□□ -1.27
HMGN1-204ENST00000380749 DMAC1Q96GE9 116 aa7.08□□□□□ -1.28
HMGN1-204ENST00000380749 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
HMGN1-204ENST00000380749 LCE1AQ5T7P2 110 aa7.05□□□□□ -1.28
HMGN1-204ENST00000380749 LOC100996750A0A140TA64 210 aa7.04□□□□□ -1.28
HMGN1-204ENST00000380749 KRTAP4-6Q9BYQ5 205 aa7.04□□□□□ -1.28
HMGN1-204ENST00000380749 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
HMGN1-204ENST00000380749 SCGB1A1P11684 91 aa6.97□□□□□ -1.29
HMGN1-204ENST00000380749 SPRR2DP22532 72 aa6.97□□□□□ -1.29
HMGN1-204ENST00000380749 KRTAP4-8Q9BYQ9 185 aa6.97□□□□□ -1.29
HMGN1-204ENST00000380749 A0A1B0GV90 55 aa6.96□□□□□ -1.29
HMGN1-204ENST00000380749 KRTAP2-2Q9BYT5 123 aa6.96□□□□□ -1.29
HMGN1-204ENST00000380749 KRTAP2-1Q9BYU5 128 aa6.96□□□□□ -1.29
HMGN1-204ENST00000380749 TRAV7A0A075B6U4 112 aa6.94□□□□□ -1.3
HMGN1-204ENST00000380749 J3QR89 54 aa6.92□□□□□ -1.3
HMGN1-204ENST00000380749 MT-ATP8P03928 68 aa6.9□□□□□ -1.31
HMGN1-204ENST00000380749 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.31
HMGN1-204ENST00000380749 KRTAP10-12P60413 245 aa6.88□□□□□ -1.31
HMGN1-204ENST00000380749 SPTSSBQ8NFR3 76 aa6.88□□□□□ -1.31
HMGN1-204ENST00000380749 ACYP2P14621 99 aa6.87□□□□□ -1.31
HMGN1-204ENST00000380749 LCE3BQ5TA77 95 aa6.79□□□□□ -1.32
HMGN1-204ENST00000380749 CHKB-CPT1BH3BT56 60 aa6.78□□□□□ -1.32
HMGN1-204ENST00000380749 SMIM20Q8N5G0 67 aa6.74□□□□□ -1.33
HMGN1-204ENST00000380749 DSTQ03001 7570 aaKnown RBP6.62□□□□□ -1.35
HMGN1-204ENST00000380749 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
HMGN1-204ENST00000380749 SNURFQ9Y675 71 aa6.59□□□□□ -1.35
HMGN1-204ENST00000380749 GPR98Q8WXG9 6306 aa6.58□□□□□ -1.36
HMGN1-204ENST00000380749 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
HMGN1-204ENST00000380749 SPANXA2-OT1Q8N9U9 137 aa6.57□□□□□ -1.36
HMGN1-204ENST00000380749 K7ERU9 68 aa6.53□□□□□ -1.36
HMGN1-204ENST00000380749 KRTAP19-7Q3SYF9 63 aa6.46□□□□□ -1.37
HMGN1-204ENST00000380749 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.37
HMGN1-204ENST00000380749 MT1EP04732 61 aa6.44□□□□□ -1.38
HMGN1-204ENST00000380749 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
HMGN1-204ENST00000380749 SERP2Q8N6R1 65 aa6.41□□□□□ -1.38
HMGN1-204ENST00000380749 SEC61GP60059 68 aa6.4□□□□□ -1.39
HMGN1-204ENST00000380749 COA5Q86WW8 74 aa6.4□□□□□ -1.39
HMGN1-204ENST00000380749 A0A0D9SG42 100 aa6.39□□□□□ -1.39
HMGN1-204ENST00000380749 SERP1Q9Y6X1 66 aa6.39□□□□□ -1.39
HMGN1-204ENST00000380749 KRTAP4-9Q9BYQ8 210 aa6.33□□□□□ -1.4
HMGN1-204ENST00000380749 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
HMGN1-204ENST00000380749 CYSTM1Q9H1C7 97 aa6.31□□□□□ -1.4
HMGN1-204ENST00000380749 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
HMGN1-204ENST00000380749 A0A1B0GU33 70 aa6.27□□□□□ -1.41
HMGN1-204ENST00000380749 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
HMGN1-204ENST00000380749 MT1GP13640 62 aa6.26□□□□□ -1.41
HMGN1-204ENST00000380749 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
HMGN1-204ENST00000380749 HMCN1Q96RW7 5635 aa6.23□□□□□ -1.41
HMGN1-204ENST00000380749 KRTAP12-1P59990 96 aa6.23□□□□□ -1.41
HMGN1-204ENST00000380749 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
HMGN1-204ENST00000380749 MT1MQ8N339 61 aa6.15□□□□□ -1.43
HMGN1-204ENST00000380749 AHNAK2Q8IVF2 5795 aa6.14□□□□□ -1.43
HMGN1-204ENST00000380749 COX7CP15954 63 aa6.14□□□□□ -1.43
HMGN1-204ENST00000380749 LCE4AQ5TA78 99 aa6.14□□□□□ -1.43
HMGN1-204ENST00000380749 SMIM26A0A096LP01 95 aa6.13□□□□□ -1.43
HMGN1-204ENST00000380749 MT1LQ93083 61 aa6.11□□□□□ -1.43
HMGN1-204ENST00000380749 A0A1B0GU69 56 aa6.09□□□□□ -1.43
HMGN1-204ENST00000380749 H7BZZ5 65 aa6.09□□□□□ -1.43
HMGN1-204ENST00000380749 MT4P47944 62 aa6.09□□□□□ -1.43
HMGN1-204ENST00000380749 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
HMGN1-204ENST00000380749 TNP1P09430 55 aa6.04□□□□□ -1.44
HMGN1-204ENST00000380749 LCE3AQ5TA76 89 aa6.04□□□□□ -1.44
HMGN1-204ENST00000380749 C10orf95Q9H7T3 257 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms