RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 TNXBP22105 4242 aa4.37□□□□□ -1.71
PDLIM5-204ENST00000380176 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
PDLIM5-204ENST00000380176 FLG2Q5D862 2391 aaPredicted RBP4.36□□□□□ -1.71
PDLIM5-204ENST00000380176 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
PDLIM5-204ENST00000380176 CSAG1Q6PB30 78 aa4.35□□□□□ -1.71
PDLIM5-204ENST00000380176 FAT3Q8TDW7 4589 aa4.34□□□□□ -1.71
PDLIM5-204ENST00000380176 KRTAP17-1Q9BYP8 105 aa4.33□□□□□ -1.72
PDLIM5-204ENST00000380176 SPINK7P58062 85 aa4.32□□□□□ -1.72
PDLIM5-204ENST00000380176 Q8N1X5 172 aa4.32□□□□□ -1.72
PDLIM5-204ENST00000380176 A8MUU9 505 aa4.31□□□□□ -1.72
PDLIM5-204ENST00000380176 C20orf166-AS1Q96NR2 134 aa4.31□□□□□ -1.72
PDLIM5-204ENST00000380176 MIR22HGQ0VDD5 57 aa4.31□□□□□ -1.72
PDLIM5-204ENST00000380176 Q5VSD8 79 aa4.3□□□□□ -1.72
PDLIM5-204ENST00000380176 RYR1P21817 5038 aa4.29□□□□□ -1.72
PDLIM5-204ENST00000380176 P0C880 135 aa4.29□□□□□ -1.72
PDLIM5-204ENST00000380176 KRTAP10-8P60410 259 aa4.28□□□□□ -1.72
PDLIM5-204ENST00000380176 KIAA1109Q2LD37 5005 aa4.28□□□□□ -1.72
PDLIM5-204ENST00000380176 MYCBP2O75592 4640 aa4.28□□□□□ -1.72
PDLIM5-204ENST00000380176 DMBT1Q9UGM3 2413 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-204ENST00000380176 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
PDLIM5-204ENST00000380176 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-204ENST00000380176 K7ERS5 55 aa4.24□□□□□ -1.73
PDLIM5-204ENST00000380176 SPATA8Q6RVD6 105 aa4.23□□□□□ -1.73
PDLIM5-204ENST00000380176 A0A1B0GU69 56 aa4.23□□□□□ -1.73
PDLIM5-204ENST00000380176 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
PDLIM5-204ENST00000380176 KRTAP9-6A0A140TA67 174 aa4.2□□□□□ -1.74
PDLIM5-204ENST00000380176 KRTAP9-7A8MTY7 169 aa4.2□□□□□ -1.74
PDLIM5-204ENST00000380176 MT1HL1P0DM35 61 aa4.19□□□□□ -1.74
PDLIM5-204ENST00000380176 LPAP08519 4548 aa4.17□□□□□ -1.74
PDLIM5-204ENST00000380176 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.15□□□□□ -1.75
PDLIM5-204ENST00000380176 RPL37P61927 97 aaKnown RBP4.15□□□□□ -1.75
PDLIM5-204ENST00000380176 NDUFAF8A1L188 74 aa4.15□□□□□ -1.75
PDLIM5-204ENST00000380176 COX6B2Q6YFQ2 88 aa4.14□□□□□ -1.75
PDLIM5-204ENST00000380176 UQCR11O14957 56 aa4.13□□□□□ -1.75
PDLIM5-204ENST00000380176 LRP2P98164 4655 aa4.13□□□□□ -1.75
PDLIM5-204ENST00000380176 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
PDLIM5-204ENST00000380176 KRTAP4-5Q9BYR2 181 aa4.12□□□□□ -1.75
PDLIM5-204ENST00000380176 ABCA13Q86UQ4 5058 aa4.11□□□□□ -1.75
PDLIM5-204ENST00000380176 KRTAP15-1Q3LI76 137 aa4.1□□□□□ -1.75
PDLIM5-204ENST00000380176 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
PDLIM5-204ENST00000380176 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.75
PDLIM5-204ENST00000380176 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
PDLIM5-204ENST00000380176 KRTAP4-8Q9BYQ9 185 aa4.08□□□□□ -1.76
PDLIM5-204ENST00000380176 H0YAA0 97 aa4.05□□□□□ -1.76
PDLIM5-204ENST00000380176 CAMK2N1Q7Z7J9 78 aa4.04□□□□□ -1.76
PDLIM5-204ENST00000380176 A0A1B0GU33 70 aa4.03□□□□□ -1.76
PDLIM5-204ENST00000380176 TPRXLQ17RH7 258 aa4.03□□□□□ -1.76
PDLIM5-204ENST00000380176 H1FX-AS1Q4G0G2 97 aa4.02□□□□□ -1.77
PDLIM5-204ENST00000380176 S4R3F8 94 aa4□□□□□ -1.77
PDLIM5-204ENST00000380176 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
PDLIM5-204ENST00000380176 HERC2O95714 4834 aa3.97□□□□□ -1.77
PDLIM5-204ENST00000380176 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
PDLIM5-204ENST00000380176 SPINT4Q6UDR6 99 aa3.95□□□□□ -1.78
PDLIM5-204ENST00000380176 MUC17Q685J3 4493 aa3.94□□□□□ -1.78
PDLIM5-204ENST00000380176 KRTAP13-4Q3LI77 160 aa3.94□□□□□ -1.78
PDLIM5-204ENST00000380176 KRTAP19-4Q3LI73 84 aa3.9□□□□□ -1.79
PDLIM5-204ENST00000380176 CRIPTQ9P021 101 aa3.9□□□□□ -1.79
PDLIM5-204ENST00000380176 KRTAP4-1Q9BYQ7 146 aa3.89□□□□□ -1.79
PDLIM5-204ENST00000380176 KRTAP9-3Q9BYQ3 159 aa3.89□□□□□ -1.79
PDLIM5-204ENST00000380176 A0A0D9SG42 100 aa3.88□□□□□ -1.79
PDLIM5-204ENST00000380176 BIRC6Q9NR09 4857 aa3.88□□□□□ -1.79
PDLIM5-204ENST00000380176 MUC2Q02817 5179 aa3.86□□□□□ -1.79
PDLIM5-204ENST00000380176 HERC1Q15751 4861 aa3.81□□□□□ -1.8
PDLIM5-204ENST00000380176 KRTAP19-2Q3LHN2 52 aa3.8□□□□□ -1.8
PDLIM5-204ENST00000380176 PCLOQ9Y6V0 5065 aa3.8□□□□□ -1.8
PDLIM5-204ENST00000380176 KRTAP12-2P59991 146 aa3.79□□□□□ -1.8
PDLIM5-204ENST00000380176 KRTAP12-1P59990 96 aa3.76□□□□□ -1.81
PDLIM5-204ENST00000380176 M0QZ58 72 aa3.75□□□□□ -1.81
PDLIM5-204ENST00000380176 HMCN2Q8NDA2 5059 aa3.74□□□□□ -1.81
PDLIM5-204ENST00000380176 R4GN34 69 aa3.71□□□□□ -1.82
PDLIM5-204ENST00000380176 FLGP20930 4061 aaPredicted RBP3.7□□□□□ -1.82
PDLIM5-204ENST00000380176 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
PDLIM5-204ENST00000380176 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
PDLIM5-204ENST00000380176 PRO2289Q9P1D8 64 aa3.67□□□□□ -1.82
PDLIM5-204ENST00000380176 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
PDLIM5-204ENST00000380176 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
PDLIM5-204ENST00000380176 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
PDLIM5-204ENST00000380176 UBR4Q5T4S7 5183 aa3.6□□□□□ -1.83
PDLIM5-204ENST00000380176 RNF213Q63HN8 5207 aa3.6□□□□□ -1.83
PDLIM5-204ENST00000380176 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
PDLIM5-204ENST00000380176 PLAC4Q8WY50 150 aa3.54□□□□□ -1.84
PDLIM5-204ENST00000380176 KRTAP9-8Q9BYQ0 159 aa3.54□□□□□ -1.84
PDLIM5-204ENST00000380176 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
PDLIM5-204ENST00000380176 MT1HP80294 61 aa3.51□□□□□ -1.85
PDLIM5-204ENST00000380176 M0R2T5 61 aa3.49□□□□□ -1.85
PDLIM5-204ENST00000380176 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
PDLIM5-204ENST00000380176 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
PDLIM5-204ENST00000380176 INE1O15225 51 aa3.45□□□□□ -1.86
PDLIM5-204ENST00000380176 SPRR2GQ9BYE4 73 aa3.44□□□□□ -1.86
PDLIM5-204ENST00000380176 MT1FP04733 61 aa3.43□□□□□ -1.86
PDLIM5-204ENST00000380176 MT2AP02795 61 aa3.43□□□□□ -1.86
PDLIM5-204ENST00000380176 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
PDLIM5-204ENST00000380176 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
PDLIM5-204ENST00000380176 TNP1P09430 55 aa3.35□□□□□ -1.87
PDLIM5-204ENST00000380176 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
PDLIM5-204ENST00000380176 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
PDLIM5-204ENST00000380176 KRTAP19-8Q3LI54 63 aa3.3□□□□□ -1.88
PDLIM5-204ENST00000380176 MT1BP07438 61 aa3.29□□□□□ -1.88
PDLIM5-204ENST00000380176 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
PDLIM5-204ENST00000380176 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 254.7 ms