RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 LRP1Q07954 4544 aaKnown RBP4.84□□□□□ -1.63
NHLRC3-202ENST00000379600 KRTAP3-2Q9BYR7 98 aa4.83□□□□□ -1.64
NHLRC3-202ENST00000379600 A0A1B0GVY2 172 aa4.82□□□□□ -1.64
NHLRC3-202ENST00000379600 KRTAP10-8P60410 259 aa4.79□□□□□ -1.64
NHLRC3-202ENST00000379600 RYR2Q92736 4967 aa4.79□□□□□ -1.64
NHLRC3-202ENST00000379600 MYCBP2O75592 4640 aa4.78□□□□□ -1.64
NHLRC3-202ENST00000379600 P0C880 135 aa4.77□□□□□ -1.65
NHLRC3-202ENST00000379600 K7ERS5 55 aa4.77□□□□□ -1.65
NHLRC3-202ENST00000379600 TPRXLQ17RH7 258 aa4.76□□□□□ -1.65
NHLRC3-202ENST00000379600 RPL37P61927 97 aaKnown RBP4.76□□□□□ -1.65
NHLRC3-202ENST00000379600 A0A0D9SG42 100 aa4.75□□□□□ -1.65
NHLRC3-202ENST00000379600 DMBT1Q9UGM3 2413 aaPredicted RBP4.75□□□□□ -1.65
NHLRC3-202ENST00000379600 KMT2CQ8NEZ4 4911 aaKnown RBP4.73□□□□□ -1.65
NHLRC3-202ENST00000379600 LPAP08519 4548 aa4.72□□□□□ -1.65
NHLRC3-202ENST00000379600 C10orf95Q9H7T3 257 aa4.7□□□□□ -1.66
NHLRC3-202ENST00000379600 S4R3F8 94 aa4.7□□□□□ -1.66
NHLRC3-202ENST00000379600 XP32Q5T750 250 aa4.7□□□□□ -1.66
NHLRC3-202ENST00000379600 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
NHLRC3-202ENST00000379600 KRTAP17-1Q9BYP8 105 aa4.64□□□□□ -1.67
NHLRC3-202ENST00000379600 KRTAP12-1P59990 96 aa4.63□□□□□ -1.67
NHLRC3-202ENST00000379600 LRP2P98164 4655 aa4.6□□□□□ -1.67
NHLRC3-202ENST00000379600 RYR1P21817 5038 aa4.6□□□□□ -1.67
NHLRC3-202ENST00000379600 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
NHLRC3-202ENST00000379600 SPINT4Q6UDR6 99 aa4.59□□□□□ -1.67
NHLRC3-202ENST00000379600 Q5VSD8 79 aa4.57□□□□□ -1.68
NHLRC3-202ENST00000379600 RYR3Q15413 4870 aa4.56□□□□□ -1.68
NHLRC3-202ENST00000379600 MT1HL1P0DM35 61 aa4.54□□□□□ -1.68
NHLRC3-202ENST00000379600 KIAA1109Q2LD37 5005 aa4.52□□□□□ -1.69
NHLRC3-202ENST00000379600 ABCA13Q86UQ4 5058 aa4.5□□□□□ -1.69
NHLRC3-202ENST00000379600 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
NHLRC3-202ENST00000379600 KRTAP21-3Q3LHN1 58 aa4.49□□□□□ -1.69
NHLRC3-202ENST00000379600 M0QZ58 72 aa4.49□□□□□ -1.69
NHLRC3-202ENST00000379600 MUC17Q685J3 4493 aa4.42□□□□□ -1.7
NHLRC3-202ENST00000379600 LORP23490 312 aaPredicted RBP4.41□□□□□ -1.7
NHLRC3-202ENST00000379600 EPPK1P58107 5090 aaKnown RBP4.38□□□□□ -1.71
NHLRC3-202ENST00000379600 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
NHLRC3-202ENST00000379600 R4GN34 69 aa4.35□□□□□ -1.71
NHLRC3-202ENST00000379600 KRTAP4-1Q9BYQ7 146 aa4.32□□□□□ -1.72
NHLRC3-202ENST00000379600 KRTAP19-2Q3LHN2 52 aa4.28□□□□□ -1.72
NHLRC3-202ENST00000379600 KRTAP4-5Q9BYR2 181 aa4.28□□□□□ -1.73
NHLRC3-202ENST00000379600 PLAC4Q8WY50 150 aa4.27□□□□□ -1.73
NHLRC3-202ENST00000379600 MUC2Q02817 5179 aa4.22□□□□□ -1.73
NHLRC3-202ENST00000379600 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
NHLRC3-202ENST00000379600 FLGP20930 4061 aaPredicted RBP4.18□□□□□ -1.74
NHLRC3-202ENST00000379600 PCLOQ9Y6V0 5065 aa4.14□□□□□ -1.75
NHLRC3-202ENST00000379600 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
NHLRC3-202ENST00000379600 CAMK2N1Q7Z7J9 78 aa4.13□□□□□ -1.75
NHLRC3-202ENST00000379600 HERC2O95714 4834 aa4.1□□□□□ -1.75
NHLRC3-202ENST00000379600 HERC1Q15751 4861 aa4.08□□□□□ -1.76
NHLRC3-202ENST00000379600 BIRC6Q9NR09 4857 aa4.07□□□□□ -1.76
NHLRC3-202ENST00000379600 LUZP6Q538Z0 58 aa4.03□□□□□ -1.76
NHLRC3-202ENST00000379600 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
NHLRC3-202ENST00000379600 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
NHLRC3-202ENST00000379600 TNP1P09430 55 aa4□□□□□ -1.77
NHLRC3-202ENST00000379600 J3QL48 77 aa3.99□□□□□ -1.77
NHLRC3-202ENST00000379600 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
NHLRC3-202ENST00000379600 LCE2CQ5TA81 110 aa3.94□□□□□ -1.78
NHLRC3-202ENST00000379600 HMCN2Q8NDA2 5059 aa3.93□□□□□ -1.78
NHLRC3-202ENST00000379600 KRTAP19-1Q8IUB9 90 aa3.92□□□□□ -1.78
NHLRC3-202ENST00000379600 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
NHLRC3-202ENST00000379600 UBR4Q5T4S7 5183 aa3.86□□□□□ -1.79
NHLRC3-202ENST00000379600 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
NHLRC3-202ENST00000379600 RNF213Q63HN8 5207 aa3.81□□□□□ -1.8
NHLRC3-202ENST00000379600 MT1FP04733 61 aa3.79□□□□□ -1.8
NHLRC3-202ENST00000379600 MT1HP80294 61 aa3.78□□□□□ -1.8
NHLRC3-202ENST00000379600 MT2AP02795 61 aa3.77□□□□□ -1.81
NHLRC3-202ENST00000379600 KRTAP8-1Q8IUC2 63 aa3.74□□□□□ -1.81
NHLRC3-202ENST00000379600 KRTAP9-8Q9BYQ0 159 aa3.74□□□□□ -1.81
NHLRC3-202ENST00000379600 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
NHLRC3-202ENST00000379600 M0R2T5 61 aa3.71□□□□□ -1.81
NHLRC3-202ENST00000379600 KRTAP19-8Q3LI54 63 aa3.71□□□□□ -1.82
NHLRC3-202ENST00000379600 KRTAP10-10P60014 251 aa3.7□□□□□ -1.82
NHLRC3-202ENST00000379600 MT1XP80297 61 aa3.7□□□□□ -1.82
NHLRC3-202ENST00000379600 MT1BP07438 61 aa3.69□□□□□ -1.82
NHLRC3-202ENST00000379600 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
NHLRC3-202ENST00000379600 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
NHLRC3-202ENST00000379600 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
NHLRC3-202ENST00000379600 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
NHLRC3-202ENST00000379600 KRTAP9-3Q9BYQ3 159 aa3.56□□□□□ -1.84
NHLRC3-202ENST00000379600 INE1O15225 51 aa3.55□□□□□ -1.84
NHLRC3-202ENST00000379600 KMT2DO14686 5537 aa3.5□□□□□ -1.85
NHLRC3-202ENST00000379600 KRTAP19-5Q3LI72 72 aa3.47□□□□□ -1.85
NHLRC3-202ENST00000379600 USH2AO75445 5202 aa3.47□□□□□ -1.85
NHLRC3-202ENST00000379600 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
NHLRC3-202ENST00000379600 LCE2BO14633 110 aa3.42□□□□□ -1.86
NHLRC3-202ENST00000379600 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
NHLRC3-202ENST00000379600 KRTAP4-8A0A0G2JLE6 195 aa3.38□□□□□ -1.87
NHLRC3-202ENST00000379600 KRTAP4-8Q9BYQ9 185 aa3.38□□□□□ -1.87
NHLRC3-202ENST00000379600 KRTAP4-7Q9BYR0 210 aa3.32□□□□□ -1.88
NHLRC3-202ENST00000379600 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
NHLRC3-202ENST00000379600 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
NHLRC3-202ENST00000379600 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
NHLRC3-202ENST00000379600 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
NHLRC3-202ENST00000379600 LCE2AQ5TA79 106 aaPredicted RBP3.22□□□□□ -1.89
NHLRC3-202ENST00000379600 FSIP2Q5CZC0 6907 aa3.2□□□□□ -1.9
NHLRC3-202ENST00000379600 MT1LQ93083 61 aa3.2□□□□□ -1.9
NHLRC3-202ENST00000379600 MT1EP04732 61 aa3.18□□□□□ -1.9
NHLRC3-202ENST00000379600 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
NHLRC3-202ENST00000379600 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
NHLRC3-202ENST00000379600 LOC100996750A0A140TA64 210 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 378.9 ms