RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 Q5VV11 94 aa6.37□□□□□ -1.39
CLCN6-206ENST00000376496 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
CLCN6-206ENST00000376496 HMCN2Q8NDA2 5059 aa6.36□□□□□ -1.39
CLCN6-206ENST00000376496 MUC2Q02817 5179 aa6.34□□□□□ -1.39
CLCN6-206ENST00000376496 LCA10Q71F78 164 aa6.32□□□□□ -1.4
CLCN6-206ENST00000376496 MUC17Q685J3 4493 aa6.32□□□□□ -1.4
CLCN6-206ENST00000376496 KRTAP3-3Q9BYR6 98 aa6.29□□□□□ -1.4
CLCN6-206ENST00000376496 A0A1B0GU69 56 aa6.29□□□□□ -1.4
CLCN6-206ENST00000376496 RBM12B-AS1Q9P1G2 102 aa6.29□□□□□ -1.4
CLCN6-206ENST00000376496 A8MU10 97 aa6.28□□□□□ -1.4
CLCN6-206ENST00000376496 S4R3F8 94 aa6.28□□□□□ -1.4
CLCN6-206ENST00000376496 H1FX-AS1Q4G0G2 97 aa6.27□□□□□ -1.41
CLCN6-206ENST00000376496 SPTSSBQ8NFR3 76 aa6.25□□□□□ -1.41
CLCN6-206ENST00000376496 A6NED7 52 aa6.24□□□□□ -1.41
CLCN6-206ENST00000376496 PMAIP1Q13794 54 aa6.2□□□□□ -1.42
CLCN6-206ENST00000376496 UBR4Q5T4S7 5183 aa6.19□□□□□ -1.42
CLCN6-206ENST00000376496 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
CLCN6-206ENST00000376496 RNF213Q63HN8 5207 aa6.14□□□□□ -1.43
CLCN6-206ENST00000376496 CSAG1Q6PB30 78 aa6.09□□□□□ -1.43
CLCN6-206ENST00000376496 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
CLCN6-206ENST00000376496 KRTAP3-2Q9BYR7 98 aa6.09□□□□□ -1.43
CLCN6-206ENST00000376496 P0C880 135 aa6.08□□□□□ -1.44
CLCN6-206ENST00000376496 UQCR11O14957 56 aa6.07□□□□□ -1.44
CLCN6-206ENST00000376496 A0A1B0GU33 70 aa6.07□□□□□ -1.44
CLCN6-206ENST00000376496 SPATA8Q6RVD6 105 aa6.07□□□□□ -1.44
CLCN6-206ENST00000376496 CDC42SE1Q9NRR8 79 aa6.07□□□□□ -1.44
CLCN6-206ENST00000376496 ADM2Q7Z4H4 148 aa6.06□□□□□ -1.44
CLCN6-206ENST00000376496 FAT4Q6V0I7 4981 aa6.06□□□□□ -1.44
CLCN6-206ENST00000376496 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
CLCN6-206ENST00000376496 H0YAA0 97 aa6.03□□□□□ -1.44
CLCN6-206ENST00000376496 KRTAP13-4Q3LI77 160 aa6□□□□□ -1.45
CLCN6-206ENST00000376496 LCE2CQ5TA81 110 aa6□□□□□ -1.45
CLCN6-206ENST00000376496 H3BS24 57 aa5.98□□□□□ -1.45
CLCN6-206ENST00000376496 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
CLCN6-206ENST00000376496 A0A0D9SG42 100 aa5.94□□□□□ -1.46
CLCN6-206ENST00000376496 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
CLCN6-206ENST00000376496 LORP23490 312 aaPredicted RBP5.92□□□□□ -1.46
CLCN6-206ENST00000376496 KTN1-AS1Q86SY8 53 aa5.9□□□□□ -1.46
CLCN6-206ENST00000376496 MT1HP80294 61 aa5.86□□□□□ -1.47
CLCN6-206ENST00000376496 M0R2T5 61 aa5.86□□□□□ -1.47
CLCN6-206ENST00000376496 A6NN06 94 aa5.83□□□□□ -1.48
CLCN6-206ENST00000376496 M0QZ58 72 aa5.83□□□□□ -1.48
CLCN6-206ENST00000376496 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
CLCN6-206ENST00000376496 R4GN34 69 aa5.81□□□□□ -1.48
CLCN6-206ENST00000376496 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
CLCN6-206ENST00000376496 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
CLCN6-206ENST00000376496 KRTAP12-1P59990 96 aa5.71□□□□□ -1.49
CLCN6-206ENST00000376496 K7ERS5 55 aa5.68□□□□□ -1.5
CLCN6-206ENST00000376496 PRAC1Q96KF2 57 aa5.67□□□□□ -1.5
CLCN6-206ENST00000376496 MT2AP02795 61 aa5.67□□□□□ -1.5
CLCN6-206ENST00000376496 MT1FP04733 61 aa5.66□□□□□ -1.5
CLCN6-206ENST00000376496 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
CLCN6-206ENST00000376496 KRTAP10-10P60014 251 aa5.64□□□□□ -1.51
CLCN6-206ENST00000376496 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
CLCN6-206ENST00000376496 CRIPTQ9P021 101 aa5.57□□□□□ -1.52
CLCN6-206ENST00000376496 ROMO1P60602 79 aa5.52□□□□□ -1.53
CLCN6-206ENST00000376496 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
CLCN6-206ENST00000376496 SPRR2GQ9BYE4 73 aa5.52□□□□□ -1.53
CLCN6-206ENST00000376496 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
CLCN6-206ENST00000376496 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
CLCN6-206ENST00000376496 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
CLCN6-206ENST00000376496 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
CLCN6-206ENST00000376496 MT1BP07438 61 aa5.35□□□□□ -1.55
CLCN6-206ENST00000376496 KRTAP19-8Q3LI54 63 aa5.34□□□□□ -1.55
CLCN6-206ENST00000376496 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.56
CLCN6-206ENST00000376496 LCE2BO14633 110 aa5.33□□□□□ -1.56
CLCN6-206ENST00000376496 USH2AO75445 5202 aa5.3□□□□□ -1.56
CLCN6-206ENST00000376496 MT1XP80297 61 aa5.2□□□□□ -1.58
CLCN6-206ENST00000376496 KRTAP10-5P60370 271 aa5.2□□□□□ -1.58
CLCN6-206ENST00000376496 FSIP2Q5CZC0 6907 aa5.16□□□□□ -1.58
CLCN6-206ENST00000376496 TNP1P09430 55 aa5.16□□□□□ -1.58
CLCN6-206ENST00000376496 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
CLCN6-206ENST00000376496 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
CLCN6-206ENST00000376496 PRO2289Q9P1D8 64 aa5.02□□□□□ -1.61
CLCN6-206ENST00000376496 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
CLCN6-206ENST00000376496 KMT2DO14686 5537 aa4.97□□□□□ -1.61
CLCN6-206ENST00000376496 PP632Q6XCG6 107 aa4.96□□□□□ -1.61
CLCN6-206ENST00000376496 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
CLCN6-206ENST00000376496 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
CLCN6-206ENST00000376496 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
CLCN6-206ENST00000376496 LCE2DQ5TA82 110 aaPredicted RBP4.89□□□□□ -1.63
CLCN6-206ENST00000376496 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
CLCN6-206ENST00000376496 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
CLCN6-206ENST00000376496 KRTAP19-6Q3LI70 58 aa4.86□□□□□ -1.63
CLCN6-206ENST00000376496 KRTAP8-1Q8IUC2 63 aa4.81□□□□□ -1.64
CLCN6-206ENST00000376496 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
CLCN6-206ENST00000376496 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
CLCN6-206ENST00000376496 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
CLCN6-206ENST00000376496 KRTAP9-2Q9BYQ4 174 aa4.77□□□□□ -1.65
CLCN6-206ENST00000376496 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
CLCN6-206ENST00000376496 KRTAP19-5Q3LI72 72 aa4.76□□□□□ -1.65
CLCN6-206ENST00000376496 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
CLCN6-206ENST00000376496 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
CLCN6-206ENST00000376496 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
CLCN6-206ENST00000376496 MT1EP04732 61 aa4.53□□□□□ -1.68
CLCN6-206ENST00000376496 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
CLCN6-206ENST00000376496 MUC12Q9UKN1 5478 aa4.52□□□□□ -1.69
CLCN6-206ENST00000376496 SPRR5A0A1B0GTR4 108 aa4.49□□□□□ -1.69
CLCN6-206ENST00000376496 KRTAP4-7Q9BYR0 210 aa4.49□□□□□ -1.69
CLCN6-206ENST00000376496 MT1LQ93083 61 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms