RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 LINC00313P59037 77 aa5.65□□□□□ -1.5
EXOSC1-202ENST00000370885 C1orf64Q8NEQ6 169 aa5.65□□□□□ -1.5
EXOSC1-202ENST00000370885 NDUFS5O43920 106 aa5.63□□□□□ -1.51
EXOSC1-202ENST00000370885 Q5W150 140 aa5.61□□□□□ -1.51
EXOSC1-202ENST00000370885 Q8N9P0 234 aaPredicted RBP5.61□□□□□ -1.51
EXOSC1-202ENST00000370885 Q1T7F1 81 aa5.6□□□□□ -1.51
EXOSC1-202ENST00000370885 SPANXA2-OT1Q8N9U9 137 aa5.59□□□□□ -1.51
EXOSC1-202ENST00000370885 CYP4F30PQ9H0H9 118 aa5.59□□□□□ -1.51
EXOSC1-202ENST00000370885 USH2AO75445 5202 aa5.58□□□□□ -1.52
EXOSC1-202ENST00000370885 SSPOA2VEC9 5147 aa5.57□□□□□ -1.52
EXOSC1-202ENST00000370885 KRTAP9-8Q9BYQ0 159 aa5.57□□□□□ -1.52
EXOSC1-202ENST00000370885 LOC101927531A0A1B0GV80 90 aa5.55□□□□□ -1.52
EXOSC1-202ENST00000370885 HRES1P13985 223 aa5.52□□□□□ -1.53
EXOSC1-202ENST00000370885 MPLKIPQ8TAP9 179 aa5.52□□□□□ -1.53
EXOSC1-202ENST00000370885 IGKV2-30P06310 120 aa5.5□□□□□ -1.53
EXOSC1-202ENST00000370885 MT2AP02795 61 aa5.47□□□□□ -1.53
EXOSC1-202ENST00000370885 KTN1-AS1Q86SY8 53 aa5.46□□□□□ -1.54
EXOSC1-202ENST00000370885 MT1FP04733 61 aa5.44□□□□□ -1.54
EXOSC1-202ENST00000370885 COA5Q86WW8 74 aa5.41□□□□□ -1.54
EXOSC1-202ENST00000370885 IGKV2D-30A0A075B6S6 120 aa5.39□□□□□ -1.55
EXOSC1-202ENST00000370885 SPINK7P58062 85 aa5.39□□□□□ -1.55
EXOSC1-202ENST00000370885 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
EXOSC1-202ENST00000370885 RBM12B-AS1Q9P1G2 102 aa5.39□□□□□ -1.55
EXOSC1-202ENST00000370885 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
EXOSC1-202ENST00000370885 DMAC1Q96GE9 116 aa5.37□□□□□ -1.55
EXOSC1-202ENST00000370885 ACYP2P14621 99 aa5.36□□□□□ -1.55
EXOSC1-202ENST00000370885 C7orf65Q6ZTY9 151 aa5.35□□□□□ -1.55
EXOSC1-202ENST00000370885 H3BS24 57 aa5.34□□□□□ -1.55
EXOSC1-202ENST00000370885 KRTAP10-10P60014 251 aa5.33□□□□□ -1.56
EXOSC1-202ENST00000370885 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
EXOSC1-202ENST00000370885 CHKB-CPT1BH3BT56 60 aa5.32□□□□□ -1.56
EXOSC1-202ENST00000370885 PSPHP1O15172 72 aa5.32□□□□□ -1.56
EXOSC1-202ENST00000370885 Q5VV11 94 aa5.32□□□□□ -1.56
EXOSC1-202ENST00000370885 LCA10Q71F78 164 aa5.31□□□□□ -1.56
EXOSC1-202ENST00000370885 CDC42SE1Q9NRR8 79 aa5.31□□□□□ -1.56
EXOSC1-202ENST00000370885 A8MUN3 132 aa5.3□□□□□ -1.56
EXOSC1-202ENST00000370885 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
EXOSC1-202ENST00000370885 KRTAP9-7A8MTY7 169 aa5.29□□□□□ -1.56
EXOSC1-202ENST00000370885 A6NN06 94 aa5.27□□□□□ -1.57
EXOSC1-202ENST00000370885 LINC01558Q9Y6Z2 57 aa5.27□□□□□ -1.57
EXOSC1-202ENST00000370885 A6NED7 52 aa5.25□□□□□ -1.57
EXOSC1-202ENST00000370885 PRR15LQ9BU68 103 aa5.24□□□□□ -1.57
EXOSC1-202ENST00000370885 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
EXOSC1-202ENST00000370885 SPTSSBQ8NFR3 76 aa5.23□□□□□ -1.57
EXOSC1-202ENST00000370885 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
EXOSC1-202ENST00000370885 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
EXOSC1-202ENST00000370885 H1FX-AS1Q4G0G2 97 aa5.18□□□□□ -1.58
EXOSC1-202ENST00000370885 KRTAP19-6Q3LI70 58 aa5.17□□□□□ -1.58
EXOSC1-202ENST00000370885 A0A1B0GU69 56 aa5.1□□□□□ -1.59
EXOSC1-202ENST00000370885 LINC01554Q52M75 96 aa5.1□□□□□ -1.59
EXOSC1-202ENST00000370885 A8MU10 97 aa5.04□□□□□ -1.6
EXOSC1-202ENST00000370885 MT1BP07438 61 aa4.99□□□□□ -1.61
EXOSC1-202ENST00000370885 SPATA8Q6RVD6 105 aa4.99□□□□□ -1.61
EXOSC1-202ENST00000370885 S4R3F8 94 aa4.98□□□□□ -1.61
EXOSC1-202ENST00000370885 UQCR11O14957 56 aa4.97□□□□□ -1.61
EXOSC1-202ENST00000370885 MIR22HGQ0VDD5 57 aa4.94□□□□□ -1.62
EXOSC1-202ENST00000370885 KRTAP19-8Q3LI54 63 aa4.93□□□□□ -1.62
EXOSC1-202ENST00000370885 KRTAP6-3Q3LI67 103 aa4.93□□□□□ -1.62
EXOSC1-202ENST00000370885 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
EXOSC1-202ENST00000370885 A0A1B0GU33 70 aa4.92□□□□□ -1.62
EXOSC1-202ENST00000370885 CSAG1Q6PB30 78 aa4.92□□□□□ -1.62
EXOSC1-202ENST00000370885 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
EXOSC1-202ENST00000370885 NEBP20929 6669 aa4.87□□□□□ -1.63
EXOSC1-202ENST00000370885 H0YAA0 97 aa4.86□□□□□ -1.63
EXOSC1-202ENST00000370885 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
EXOSC1-202ENST00000370885 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.63
EXOSC1-202ENST00000370885 KRTAP10-5P60370 271 aa4.84□□□□□ -1.63
EXOSC1-202ENST00000370885 KRTAP4-6Q9BYQ5 205 aa4.84□□□□□ -1.63
EXOSC1-202ENST00000370885 P0C880 135 aa4.81□□□□□ -1.64
EXOSC1-202ENST00000370885 ADM2Q7Z4H4 148 aa4.81□□□□□ -1.64
EXOSC1-202ENST00000370885 KRTAP13-4Q3LI77 160 aa4.77□□□□□ -1.65
EXOSC1-202ENST00000370885 KMT2DO14686 5537 aa4.75□□□□□ -1.65
EXOSC1-202ENST00000370885 ROMO1P60602 79 aa4.73□□□□□ -1.65
EXOSC1-202ENST00000370885 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
EXOSC1-202ENST00000370885 CRIPTQ9P021 101 aa4.73□□□□□ -1.65
EXOSC1-202ENST00000370885 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
EXOSC1-202ENST00000370885 M0QZ58 72 aa4.7□□□□□ -1.66
EXOSC1-202ENST00000370885 KRTAP5-9P26371 169 aa4.7□□□□□ -1.66
EXOSC1-202ENST00000370885 K7ERS5 55 aa4.69□□□□□ -1.66
EXOSC1-202ENST00000370885 A0A0D9SG42 100 aa4.65□□□□□ -1.67
EXOSC1-202ENST00000370885 MT1XP80297 61 aa4.65□□□□□ -1.67
EXOSC1-202ENST00000370885 KRTAP20-1Q3LI63 56 aa4.61□□□□□ -1.67
EXOSC1-202ENST00000370885 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
EXOSC1-202ENST00000370885 KRTAP12-2P59991 146 aa4.59□□□□□ -1.67
EXOSC1-202ENST00000370885 R4GN34 69 aa4.57□□□□□ -1.68
EXOSC1-202ENST00000370885 SPINT4Q6UDR6 99 aa4.54□□□□□ -1.68
EXOSC1-202ENST00000370885 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
EXOSC1-202ENST00000370885 SPRR2FQ96RM1 72 aa4.52□□□□□ -1.69
EXOSC1-202ENST00000370885 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
EXOSC1-202ENST00000370885 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
EXOSC1-202ENST00000370885 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
EXOSC1-202ENST00000370885 SPRR2EP22531 72 aa4.47□□□□□ -1.69
EXOSC1-202ENST00000370885 SPRR2BP35325 72 aa4.47□□□□□ -1.69
EXOSC1-202ENST00000370885 SPRR2AP35326 72 aa4.47□□□□□ -1.69
EXOSC1-202ENST00000370885 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
EXOSC1-202ENST00000370885 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
EXOSC1-202ENST00000370885 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
EXOSC1-202ENST00000370885 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
EXOSC1-202ENST00000370885 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
EXOSC1-202ENST00000370885 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms