RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 KRTAP3-3Q9BYR6 98 aa9.15□□□□□ -0.94
CHUK-201ENST00000370397 KRTAP10-6P60371 365 aaPredicted RBP9.14□□□□□ -0.95
CHUK-201ENST00000370397 KRTAP13-4Q3LI77 160 aa9.1□□□□□ -0.95
CHUK-201ENST00000370397 FLG2Q5D862 2391 aaPredicted RBP9.1□□□□□ -0.95
CHUK-201ENST00000370397 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
CHUK-201ENST00000370397 CRIPTQ9P021 101 aa9.06□□□□□ -0.96
CHUK-201ENST00000370397 SMR3BP02814 79 aaPredicted RBP9.05□□□□□ -0.96
CHUK-201ENST00000370397 P0C880 135 aa9.02□□□□□ -0.97
CHUK-201ENST00000370397 TPRXLQ17RH7 258 aa8.95□□□□□ -0.98
CHUK-201ENST00000370397 MYCBP2O75592 4640 aa8.95□□□□□ -0.98
CHUK-201ENST00000370397 LPAP08519 4548 aa8.93□□□□□ -0.98
CHUK-201ENST00000370397 KRTAP10-8P60410 259 aa8.93□□□□□ -0.98
CHUK-201ENST00000370397 RPL37P61927 97 aaKnown RBP8.93□□□□□ -0.98
CHUK-201ENST00000370397 K7ERS5 55 aa8.91□□□□□ -0.98
CHUK-201ENST00000370397 EPPK1P58107 5090 aaKnown RBP8.83□□□□□ -1
CHUK-201ENST00000370397 A0A0D9SG42 100 aa8.79□□□□□ -1
CHUK-201ENST00000370397 RYR1P21817 5038 aa8.79□□□□□ -1
CHUK-201ENST00000370397 KRTAP12-2P59991 146 aa8.78□□□□□ -1
CHUK-201ENST00000370397 C10orf95Q9H7T3 257 aa8.76□□□□□ -1.01
CHUK-201ENST00000370397 S4R3F8 94 aa8.76□□□□□ -1.01
CHUK-201ENST00000370397 XP32Q5T750 250 aa8.75□□□□□ -1.01
CHUK-201ENST00000370397 DMBT1Q9UGM3 2413 aaPredicted RBP8.75□□□□□ -1.01
CHUK-201ENST00000370397 KRTAP15-1Q3LI76 137 aa8.72□□□□□ -1.01
CHUK-201ENST00000370397 KRTAP17-1Q9BYP8 105 aa8.71□□□□□ -1.02
CHUK-201ENST00000370397 KRTAP12-1P59990 96 aa8.69□□□□□ -1.02
CHUK-201ENST00000370397 KIAA1109Q2LD37 5005 aa8.67□□□□□ -1.02
CHUK-201ENST00000370397 Q5VSD8 79 aa8.66□□□□□ -1.02
CHUK-201ENST00000370397 LRP2P98164 4655 aa8.65□□□□□ -1.02
CHUK-201ENST00000370397 BIRC6Q9NR09 4857 aa8.6□□□□□ -1.03
CHUK-201ENST00000370397 SPINT4Q6UDR6 99 aa8.56□□□□□ -1.04
CHUK-201ENST00000370397 HERC2O95714 4834 aa8.49□□□□□ -1.05
CHUK-201ENST00000370397 MT1HL1P0DM35 61 aa8.46□□□□□ -1.06
CHUK-201ENST00000370397 KRTAP4-5Q9BYR2 181 aa8.46□□□□□ -1.06
CHUK-201ENST00000370397 M0QZ58 72 aa8.43□□□□□ -1.06
CHUK-201ENST00000370397 NDUFAF8A1L188 74 aa8.42□□□□□ -1.06
CHUK-201ENST00000370397 MUC17Q685J3 4493 aa8.42□□□□□ -1.06
CHUK-201ENST00000370397 ABCA13Q86UQ4 5058 aa8.41□□□□□ -1.06
CHUK-201ENST00000370397 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.1
CHUK-201ENST00000370397 PCLOQ9Y6V0 5065 aa8.11□□□□□ -1.11
CHUK-201ENST00000370397 R4GN34 69 aa8.08□□□□□ -1.12
CHUK-201ENST00000370397 J3QL48 77 aa8.08□□□□□ -1.12
CHUK-201ENST00000370397 KRTAP19-2Q3LHN2 52 aa8.06□□□□□ -1.12
CHUK-201ENST00000370397 KRTAP4-1Q9BYQ7 146 aa8.02□□□□□ -1.13
CHUK-201ENST00000370397 PLAC4Q8WY50 150 aa8.02□□□□□ -1.13
CHUK-201ENST00000370397 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
CHUK-201ENST00000370397 MUC2Q02817 5179 aa7.86□□□□□ -1.15
CHUK-201ENST00000370397 HERC1Q15751 4861 aa7.83□□□□□ -1.16
CHUK-201ENST00000370397 PP632Q6XCG6 107 aa7.8□□□□□ -1.16
CHUK-201ENST00000370397 HMCN2Q8NDA2 5059 aa7.79□□□□□ -1.16
CHUK-201ENST00000370397 SEC61BP60468 96 aaKnown RBP7.78□□□□□ -1.16
CHUK-201ENST00000370397 A0A0A0MQY5 61 aa7.69□□□□□ -1.18
CHUK-201ENST00000370397 SPRR5A0A1B0GTR4 108 aa7.66□□□□□ -1.18
CHUK-201ENST00000370397 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
CHUK-201ENST00000370397 KRTAP23-1A1A580 65 aa7.6□□□□□ -1.19
CHUK-201ENST00000370397 LUZP6Q538Z0 58 aa7.53□□□□□ -1.2
CHUK-201ENST00000370397 TNP1P09430 55 aa7.46□□□□□ -1.21
CHUK-201ENST00000370397 FAT4Q6V0I7 4981 aa7.45□□□□□ -1.22
CHUK-201ENST00000370397 UBR4Q5T4S7 5183 aa7.38□□□□□ -1.23
CHUK-201ENST00000370397 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
CHUK-201ENST00000370397 SPRR2GQ9BYE4 73 aa7.35□□□□□ -1.23
CHUK-201ENST00000370397 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.23
CHUK-201ENST00000370397 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
CHUK-201ENST00000370397 LCE3AQ5TA76 89 aa7.19□□□□□ -1.26
CHUK-201ENST00000370397 KRTAP8-1Q8IUC2 63 aa7.06□□□□□ -1.28
CHUK-201ENST00000370397 MT1HP80294 61 aa7.05□□□□□ -1.28
CHUK-201ENST00000370397 MT1FP04733 61 aa7.04□□□□□ -1.28
CHUK-201ENST00000370397 MT2AP02795 61 aa7□□□□□ -1.29
CHUK-201ENST00000370397 KRTAP9-8Q9BYQ0 159 aa6.99□□□□□ -1.29
CHUK-201ENST00000370397 KRTAP19-8Q3LI54 63 aa6.98□□□□□ -1.29
CHUK-201ENST00000370397 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
CHUK-201ENST00000370397 MT1XP80297 61 aa6.93□□□□□ -1.3
CHUK-201ENST00000370397 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
CHUK-201ENST00000370397 MT1BP07438 61 aa6.91□□□□□ -1.3
CHUK-201ENST00000370397 KRTAP10-12P60413 245 aa6.86□□□□□ -1.31
CHUK-201ENST00000370397 PRO2289Q9P1D8 64 aa6.85□□□□□ -1.31
CHUK-201ENST00000370397 M0R2T5 61 aa6.83□□□□□ -1.32
CHUK-201ENST00000370397 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
CHUK-201ENST00000370397 KRTAP12-3P60328 96 aa6.78□□□□□ -1.32
CHUK-201ENST00000370397 INE1O15225 51 aa6.75□□□□□ -1.33
CHUK-201ENST00000370397 KRTAP10-7P60409 375 aaPredicted RBP6.75□□□□□ -1.33
CHUK-201ENST00000370397 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
CHUK-201ENST00000370397 KMT2DO14686 5537 aa6.49□□□□□ -1.37
CHUK-201ENST00000370397 KRTAP19-5Q3LI72 72 aa6.46□□□□□ -1.38
CHUK-201ENST00000370397 LCE3CQ5T5A8 94 aa6.46□□□□□ -1.38
CHUK-201ENST00000370397 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
CHUK-201ENST00000370397 USH2AO75445 5202 aa6.4□□□□□ -1.38
CHUK-201ENST00000370397 LCE2BO14633 110 aa6.38□□□□□ -1.39
CHUK-201ENST00000370397 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
CHUK-201ENST00000370397 KRTAP2-3P0C7H8 128 aa6.26□□□□□ -1.41
CHUK-201ENST00000370397 KRTAP2-4Q9BYR9 128 aa6.26□□□□□ -1.41
CHUK-201ENST00000370397 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
CHUK-201ENST00000370397 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
CHUK-201ENST00000370397 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
CHUK-201ENST00000370397 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
CHUK-201ENST00000370397 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
CHUK-201ENST00000370397 KRTAP9-2Q9BYQ4 174 aa6.1□□□□□ -1.43
CHUK-201ENST00000370397 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
CHUK-201ENST00000370397 SSPOA2VEC9 5147 aa6.06□□□□□ -1.44
CHUK-201ENST00000370397 MT1LQ93083 61 aa5.99□□□□□ -1.45
CHUK-201ENST00000370397 MT1EP04732 61 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms