RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 KTN1-AS1Q86SY8 53 aa8.6□□□□□ -1.03
PHGDH-202ENST00000369409 CHKB-CPT1BH3BT56 60 aa8.58□□□□□ -1.04
PHGDH-202ENST00000369409 Q5VV11 94 aa8.55□□□□□ -1.04
PHGDH-202ENST00000369409 KRTAP4-1Q9BYQ7 146 aa8.54□□□□□ -1.04
PHGDH-202ENST00000369409 RBM12B-AS1Q9P1G2 102 aa8.49□□□□□ -1.05
PHGDH-202ENST00000369409 PRR15LQ9BU68 103 aa8.47□□□□□ -1.05
PHGDH-202ENST00000369409 CDC42SE1Q9NRR8 79 aa8.44□□□□□ -1.06
PHGDH-202ENST00000369409 A6NED7 52 aa8.43□□□□□ -1.06
PHGDH-202ENST00000369409 SPTSSBQ8NFR3 76 aa8.42□□□□□ -1.06
PHGDH-202ENST00000369409 H1FX-AS1Q4G0G2 97 aa8.41□□□□□ -1.06
PHGDH-202ENST00000369409 S4R3F8 94 aa8.38□□□□□ -1.07
PHGDH-202ENST00000369409 A6NN06 94 aa8.38□□□□□ -1.07
PHGDH-202ENST00000369409 LCA10Q71F78 164 aa8.37□□□□□ -1.07
PHGDH-202ENST00000369409 LINC01558Q9Y6Z2 57 aa8.36□□□□□ -1.07
PHGDH-202ENST00000369409 MUC2Q02817 5179 aa8.32□□□□□ -1.08
PHGDH-202ENST00000369409 KRTAP3-3Q9BYR6 98 aa8.32□□□□□ -1.08
PHGDH-202ENST00000369409 KRTAP19-2Q3LHN2 52 aa8.3□□□□□ -1.08
PHGDH-202ENST00000369409 A8MU10 97 aa8.28□□□□□ -1.08
PHGDH-202ENST00000369409 UBR4Q5T4S7 5183 aa8.27□□□□□ -1.09
PHGDH-202ENST00000369409 A0A1B0GU69 56 aa8.23□□□□□ -1.09
PHGDH-202ENST00000369409 RNF213Q63HN8 5207 aa8.22□□□□□ -1.09
PHGDH-202ENST00000369409 CSAG1Q6PB30 78 aa8.16□□□□□ -1.1
PHGDH-202ENST00000369409 FLGP20930 4061 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-202ENST00000369409 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
PHGDH-202ENST00000369409 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.12
PHGDH-202ENST00000369409 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
PHGDH-202ENST00000369409 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
PHGDH-202ENST00000369409 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
PHGDH-202ENST00000369409 FAT4Q6V0I7 4981 aa8.01□□□□□ -1.13
PHGDH-202ENST00000369409 P0C880 135 aa7.98□□□□□ -1.13
PHGDH-202ENST00000369409 UQCR11O14957 56 aa7.97□□□□□ -1.13
PHGDH-202ENST00000369409 A0A1B0GU33 70 aa7.96□□□□□ -1.13
PHGDH-202ENST00000369409 H0YAA0 97 aa7.96□□□□□ -1.13
PHGDH-202ENST00000369409 SPATA8Q6RVD6 105 aa7.95□□□□□ -1.14
PHGDH-202ENST00000369409 MT1HP80294 61 aa7.94□□□□□ -1.14
PHGDH-202ENST00000369409 MIR22HGQ0VDD5 57 aa7.89□□□□□ -1.15
PHGDH-202ENST00000369409 M0R2T5 61 aa7.88□□□□□ -1.15
PHGDH-202ENST00000369409 PRAC1Q96KF2 57 aa7.86□□□□□ -1.15
PHGDH-202ENST00000369409 KRTAP13-4Q3LI77 160 aa7.83□□□□□ -1.16
PHGDH-202ENST00000369409 H3BS24 57 aa7.81□□□□□ -1.16
PHGDH-202ENST00000369409 LORP23490 312 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-202ENST00000369409 M0QZ58 72 aa7.72□□□□□ -1.17
PHGDH-202ENST00000369409 R4GN34 69 aa7.72□□□□□ -1.17
PHGDH-202ENST00000369409 A0A0D9SG42 100 aa7.7□□□□□ -1.18
PHGDH-202ENST00000369409 MT2AP02795 61 aa7.64□□□□□ -1.19
PHGDH-202ENST00000369409 KRTAP9-8Q9BYQ0 159 aa7.64□□□□□ -1.19
PHGDH-202ENST00000369409 MT1FP04733 61 aa7.6□□□□□ -1.19
PHGDH-202ENST00000369409 CRIPTQ9P021 101 aa7.6□□□□□ -1.19
PHGDH-202ENST00000369409 LCE2AQ5TA79 106 aaPredicted RBP7.6□□□□□ -1.19
PHGDH-202ENST00000369409 KRTAP10-10P60014 251 aa7.57□□□□□ -1.2
PHGDH-202ENST00000369409 KRTAP25-1Q3LHN0 102 aa7.52□□□□□ -1.21
PHGDH-202ENST00000369409 K7ERS5 55 aa7.51□□□□□ -1.21
PHGDH-202ENST00000369409 KRTAP12-1P59990 96 aa7.51□□□□□ -1.21
PHGDH-202ENST00000369409 KRTAP12-2P59991 146 aa7.51□□□□□ -1.21
PHGDH-202ENST00000369409 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
PHGDH-202ENST00000369409 ROMO1P60602 79 aa7.47□□□□□ -1.21
PHGDH-202ENST00000369409 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
PHGDH-202ENST00000369409 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
PHGDH-202ENST00000369409 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
PHGDH-202ENST00000369409 KRTAP19-8Q3LI54 63 aa7.26□□□□□ -1.25
PHGDH-202ENST00000369409 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
PHGDH-202ENST00000369409 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
PHGDH-202ENST00000369409 MT1BP07438 61 aa7.19□□□□□ -1.26
PHGDH-202ENST00000369409 LCE2BO14633 110 aa7.17□□□□□ -1.26
PHGDH-202ENST00000369409 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
PHGDH-202ENST00000369409 USH2AO75445 5202 aa6.97□□□□□ -1.29
PHGDH-202ENST00000369409 MT1XP80297 61 aa6.96□□□□□ -1.29
PHGDH-202ENST00000369409 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
PHGDH-202ENST00000369409 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
PHGDH-202ENST00000369409 NDUFAF8A1L188 74 aa6.88□□□□□ -1.31
PHGDH-202ENST00000369409 TNP1P09430 55 aa6.87□□□□□ -1.31
PHGDH-202ENST00000369409 LCE2DQ5TA82 110 aaPredicted RBP6.86□□□□□ -1.31
PHGDH-202ENST00000369409 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
PHGDH-202ENST00000369409 SSPOA2VEC9 5147 aa6.78□□□□□ -1.32
PHGDH-202ENST00000369409 KRTAP10-7P60409 375 aaPredicted RBP6.7□□□□□ -1.34
PHGDH-202ENST00000369409 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
PHGDH-202ENST00000369409 FSIP2Q5CZC0 6907 aa6.69□□□□□ -1.34
PHGDH-202ENST00000369409 PP632Q6XCG6 107 aa6.65□□□□□ -1.34
PHGDH-202ENST00000369409 KRTAP10-12P60413 245 aa6.63□□□□□ -1.35
PHGDH-202ENST00000369409 A0A0A0MQY5 61 aa6.62□□□□□ -1.35
PHGDH-202ENST00000369409 KRTAP9-2Q9BYQ4 174 aa6.62□□□□□ -1.35
PHGDH-202ENST00000369409 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
PHGDH-202ENST00000369409 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
PHGDH-202ENST00000369409 LUZP6Q538Z0 58 aa6.53□□□□□ -1.36
PHGDH-202ENST00000369409 FCGBPQ9Y6R7 5405 aaPredicted RBP6.44□□□□□ -1.38
PHGDH-202ENST00000369409 KRTAP4-8A0A0G2JLE6 195 aa6.44□□□□□ -1.38
PHGDH-202ENST00000369409 KRTAP8-1Q8IUC2 63 aa6.44□□□□□ -1.38
PHGDH-202ENST00000369409 KRTAP4-8Q9BYQ9 185 aa6.44□□□□□ -1.38
PHGDH-202ENST00000369409 KMT2DO14686 5537 aa6.43□□□□□ -1.38
PHGDH-202ENST00000369409 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
PHGDH-202ENST00000369409 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
PHGDH-202ENST00000369409 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
PHGDH-202ENST00000369409 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.42
PHGDH-202ENST00000369409 MACF1Q9UPN3 7388 aaKnown RBP6.15□□□□□ -1.43
PHGDH-202ENST00000369409 MT1EP04732 61 aa6.1□□□□□ -1.43
PHGDH-202ENST00000369409 KRTAP9-6A0A140TA67 174 aa6.08□□□□□ -1.44
PHGDH-202ENST00000369409 SPRR2FQ96RM1 72 aa5.99□□□□□ -1.45
PHGDH-202ENST00000369409 MT1LQ93083 61 aa5.98□□□□□ -1.45
PHGDH-202ENST00000369409 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
PHGDH-202ENST00000369409 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms