RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 LINC00315P59091 139 aa2.71□□□□□ -1.98
ECHDC1-204ENST00000368292 Q6ZSA8 131 aa2.71□□□□□ -1.98
ECHDC1-204ENST00000368292 H3BRN7 92 aa2.7□□□□□ -1.98
ECHDC1-204ENST00000368292 NCR3O14931 201 aa2.69□□□□□ -1.98
ECHDC1-204ENST00000368292 INE1O15225 51 aa2.69□□□□□ -1.98
ECHDC1-204ENST00000368292 IGLV4-60A0A075B6I1 120 aa2.68□□□□□ -1.98
ECHDC1-204ENST00000368292 KRTAP13-3Q3SY46 172 aa2.68□□□□□ -1.98
ECHDC1-204ENST00000368292 HTN3P15516 51 aa2.67□□□□□ -1.98
ECHDC1-204ENST00000368292 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
ECHDC1-204ENST00000368292 LINC01590Q5TEZ4 76 aa2.67□□□□□ -1.98
ECHDC1-204ENST00000368292 Q8N9L7 120 aa2.67□□□□□ -1.98
ECHDC1-204ENST00000368292 H3BUA1 57 aa2.66□□□□□ -1.98
ECHDC1-204ENST00000368292 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
ECHDC1-204ENST00000368292 ARHGAP5-AS1Q96IT6 56 aa2.66□□□□□ -1.98
ECHDC1-204ENST00000368292 Q6ZQY7 126 aa2.65□□□□□ -1.99
ECHDC1-204ENST00000368292 IAPPP10997 89 aa2.64□□□□□ -1.99
ECHDC1-204ENST00000368292 USMG5Q96IX5 58 aa2.64□□□□□ -1.99
ECHDC1-204ENST00000368292 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
ECHDC1-204ENST00000368292 SPART-AS1P0CW21 52 aa2.63□□□□□ -1.99
ECHDC1-204ENST00000368292 APELAP0DMC3 54 aa2.63□□□□□ -1.99
ECHDC1-204ENST00000368292 IGKV2D-24A0A075B6R9 120 aa2.62□□□□□ -1.99
ECHDC1-204ENST00000368292 KRTAP10-8P60410 259 aa2.62□□□□□ -1.99
ECHDC1-204ENST00000368292 SSBP3-AS1Q7Z2R9 100 aa2.62□□□□□ -1.99
ECHDC1-204ENST00000368292 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.61□□□□□ -1.99
ECHDC1-204ENST00000368292 SMIM2Q9BVW6 85 aa2.61□□□□□ -1.99
ECHDC1-204ENST00000368292 FCGBPQ9Y6R7 5405 aaPredicted RBP2.6□□□□□ -1.99
ECHDC1-204ENST00000368292 Q6ZRX8 168 aa2.6□□□□□ -1.99
ECHDC1-204ENST00000368292 CRIP1P50238 77 aa2.59□□□□□ -1.99
ECHDC1-204ENST00000368292 LINC00158P58513 81 aa2.59□□□□□ -1.99
ECHDC1-204ENST00000368292 DEFB131AP59861 70 aa2.59□□□□□ -1.99
ECHDC1-204ENST00000368292 SMIM11BQ8TCY0 68 aa2.59□□□□□ -1.99
ECHDC1-204ENST00000368292 LINC00308Q8TCZ7 52 aa2.59□□□□□ -1.99
ECHDC1-204ENST00000368292 PLAC4Q8WY50 150 aa2.58□□□□□ -2
ECHDC1-204ENST00000368292 CNFNQ9BYD5 112 aa2.58□□□□□ -2
ECHDC1-204ENST00000368292 USH2AO75445 5202 aa2.57□□□□□ -2
ECHDC1-204ENST00000368292 MUC17Q685J3 4493 aa2.57□□□□□ -2
ECHDC1-204ENST00000368292 GVQW2A0A096LPI5 108 aaPredicted RBP2.56□□□□□ -2
ECHDC1-204ENST00000368292 NDUFA1O15239 70 aa2.56□□□□□ -2
ECHDC1-204ENST00000368292 RPL39P5Q59GN2 51 aa2.56□□□□□ -2
ECHDC1-204ENST00000368292 SYNE2Q8WXH0 6885 aaKnown RBP2.56□□□□□ -2
ECHDC1-204ENST00000368292 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
ECHDC1-204ENST00000368292 ANGP03950 147 aaKnown RBP2.55□□□□□ -2
ECHDC1-204ENST00000368292 IGKV2-28A0A075B6P5 120 aa2.54□□□□□ -2
ECHDC1-204ENST00000368292 IGKV2D-28P01615 120 aa2.54□□□□□ -2
ECHDC1-204ENST00000368292 KRTAP20-1Q3LI63 56 aa2.54□□□□□ -2
ECHDC1-204ENST00000368292 Q8IZM0 81 aa2.54□□□□□ -2
ECHDC1-204ENST00000368292 CDKN2A-AS1Q9UH64 79 aa2.54□□□□□ -2
ECHDC1-204ENST00000368292 IGKV2-24A0A0C4DH68 120 aa2.53□□□□□ -2
ECHDC1-204ENST00000368292 KLK9Q2XQG4 91 aa2.53□□□□□ -2
ECHDC1-204ENST00000368292 PIGYQ3MUY2 71 aa2.53□□□□□ -2
ECHDC1-204ENST00000368292 RHPN1-AS1Q9BWJ2 59 aa2.53□□□□□ -2
ECHDC1-204ENST00000368292 DEFB130BP0DP73 79 aa2.52□□□□□ -2.01
ECHDC1-204ENST00000368292 DEFB130AP0DP74 79 aa2.52□□□□□ -2.01
ECHDC1-204ENST00000368292 KRTAP13-2Q52LG2 175 aa2.52□□□□□ -2.01
ECHDC1-204ENST00000368292 PRR9Q5T870 116 aa2.52□□□□□ -2.01
ECHDC1-204ENST00000368292 A0A096LPF7 62 aa2.51□□□□□ -2.01
ECHDC1-204ENST00000368292 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
ECHDC1-204ENST00000368292 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
ECHDC1-204ENST00000368292 KRTAP6-3Q3LI67 103 aa2.5□□□□□ -2.01
ECHDC1-204ENST00000368292 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
ECHDC1-204ENST00000368292 NEBP20929 6669 aa2.5□□□□□ -2.01
ECHDC1-204ENST00000368292 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
ECHDC1-204ENST00000368292 DEFB1P60022 68 aa2.49□□□□□ -2.01
ECHDC1-204ENST00000368292 WFDC10BQ8IUB3 73 aa2.49□□□□□ -2.01
ECHDC1-204ENST00000368292 KRTAP4-1Q9BYQ7 146 aa2.49□□□□□ -2.01
ECHDC1-204ENST00000368292 MT1HP80294 61 aa2.48□□□□□ -2.01
ECHDC1-204ENST00000368292 H3BNG1 76 aa2.47□□□□□ -2.01
ECHDC1-204ENST00000368292 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
ECHDC1-204ENST00000368292 SPINK13Q1W4C9 94 aa2.46□□□□□ -2.02
ECHDC1-204ENST00000368292 SPINK9Q5DT21 86 aa2.46□□□□□ -2.02
ECHDC1-204ENST00000368292 CRIPTQ9P021 101 aa2.46□□□□□ -2.02
ECHDC1-204ENST00000368292 K7EIM0 57 aa2.44□□□□□ -2.02
ECHDC1-204ENST00000368292 IGFL1Q6UW32 110 aa2.44□□□□□ -2.02
ECHDC1-204ENST00000368292 PRCDQ00LT1 54 aa2.43□□□□□ -2.02
ECHDC1-204ENST00000368292 LINC00575Q6W349 94 aa2.43□□□□□ -2.02
ECHDC1-204ENST00000368292 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
ECHDC1-204ENST00000368292 TP53AIP1Q9HCN2 124 aa2.42□□□□□ -2.02
ECHDC1-204ENST00000368292 NOP10Q9NPE3 64 aaKnown RBP2.42□□□□□ -2.02
ECHDC1-204ENST00000368292 MUC12Q9UKN1 5478 aa2.41□□□□□ -2.02
ECHDC1-204ENST00000368292 TMEM167AQ8TBQ9 72 aa2.41□□□□□ -2.02
ECHDC1-204ENST00000368292 A8MTW9 85 aa2.4□□□□□ -2.03
ECHDC1-204ENST00000368292 K7EQZ3 153 aa2.4□□□□□ -2.03
ECHDC1-204ENST00000368292 POLR2KP53803 58 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-204ENST00000368292 RPL37P61927 97 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-204ENST00000368292 WT1-ASQ06250 92 aa2.4□□□□□ -2.03
ECHDC1-204ENST00000368292 SPINK6Q6UWN8 80 aa2.4□□□□□ -2.03
ECHDC1-204ENST00000368292 LINC01556Q5JQF7 62 aa2.39□□□□□ -2.03
ECHDC1-204ENST00000368292 COX6B2Q6YFQ2 88 aa2.39□□□□□ -2.03
ECHDC1-204ENST00000368292 MRPL34Q9BQ48 92 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-204ENST00000368292 I3L2K1 104 aa2.38□□□□□ -2.03
ECHDC1-204ENST00000368292 C6orf48Q9UBA6 75 aa2.38□□□□□ -2.03
ECHDC1-204ENST00000368292 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
ECHDC1-204ENST00000368292 HTN1P15515 57 aa2.37□□□□□ -2.03
ECHDC1-204ENST00000368292 PCOTHQ58A44 107 aa2.37□□□□□ -2.03
ECHDC1-204ENST00000368292 UNQ6190/PRO20217Q6UXQ8 127 aa2.37□□□□□ -2.03
ECHDC1-204ENST00000368292 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
ECHDC1-204ENST00000368292 RPL39P62891 51 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-204ENST00000368292 RPL39LQ96EH5 51 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-204ENST00000368292 KMT2DO14686 5537 aa2.35□□□□□ -2.03
ECHDC1-204ENST00000368292 FLGP20930 4061 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms