RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 HIST1H4GQ99525 98 aa6.1□□□□□ -1.43
VAMP4-202ENST00000367740 SPCS1Q9Y6A9 102 aa6.1□□□□□ -1.43
VAMP4-202ENST00000367740 A0A1W2PPM0 123 aa6.09□□□□□ -1.43
VAMP4-202ENST00000367740 SEC61GP60059 68 aa6.09□□□□□ -1.43
VAMP4-202ENST00000367740 PRR15Q8IV56 129 aa6.09□□□□□ -1.43
VAMP4-202ENST00000367740 LCA10Q71F78 164 aa6.08□□□□□ -1.44
VAMP4-202ENST00000367740 ORMDL1Q9P0S3 153 aa6.08□□□□□ -1.44
VAMP4-202ENST00000367740 RBM3P98179 157 aaKnown RBP6.07□□□□□ -1.44
VAMP4-202ENST00000367740 CRIPTQ9P021 101 aa6.06□□□□□ -1.44
VAMP4-202ENST00000367740 MRPL34Q9BQ48 92 aaKnown RBP6.05□□□□□ -1.44
VAMP4-202ENST00000367740 A0A0B4J2C4 111 aa6.04□□□□□ -1.44
VAMP4-202ENST00000367740 H3BQ85 93 aa6.03□□□□□ -1.44
VAMP4-202ENST00000367740 TMEM256-PLSCR3K7ERE1 68 aa6.03□□□□□ -1.44
VAMP4-202ENST00000367740 Q6ZQT0 140 aa6.03□□□□□ -1.44
VAMP4-202ENST00000367740 TMEM254Q8TBM7 123 aa6.03□□□□□ -1.44
VAMP4-202ENST00000367740 DNAL4O96015 105 aa6.02□□□□□ -1.45
VAMP4-202ENST00000367740 COX8AP10176 69 aa6.02□□□□□ -1.45
VAMP4-202ENST00000367740 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
VAMP4-202ENST00000367740 Q5W150 140 aa6.01□□□□□ -1.45
VAMP4-202ENST00000367740 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
VAMP4-202ENST00000367740 V9GYY9 64 aa6.01□□□□□ -1.45
VAMP4-202ENST00000367740 C9JAW5 83 aa6□□□□□ -1.45
VAMP4-202ENST00000367740 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
VAMP4-202ENST00000367740 NDUFS5O43920 106 aa5.99□□□□□ -1.45
VAMP4-202ENST00000367740 MT-ATP8P03928 68 aa5.99□□□□□ -1.45
VAMP4-202ENST00000367740 CCDC179H3BU77 68 aa5.98□□□□□ -1.45
VAMP4-202ENST00000367740 AHNAK2Q8IVF2 5795 aa5.98□□□□□ -1.45
VAMP4-202ENST00000367740 HIGD1BQ9P298 99 aa5.96□□□□□ -1.46
VAMP4-202ENST00000367740 ETDBQ3ZM63 59 aa5.94□□□□□ -1.46
VAMP4-202ENST00000367740 PRO0461Q9UI25 63 aa5.94□□□□□ -1.46
VAMP4-202ENST00000367740 KRTAP5-11Q6L8G4 156 aa5.93□□□□□ -1.46
VAMP4-202ENST00000367740 hDV103S1A0JD37 113 aa5.92□□□□□ -1.46
VAMP4-202ENST00000367740 PRO1854Q9UHT4 67 aa5.92□□□□□ -1.46
VAMP4-202ENST00000367740 UQCRQO14949 82 aa5.91□□□□□ -1.46
VAMP4-202ENST00000367740 KRTAP5-10Q6L8G5 202 aa5.91□□□□□ -1.46
VAMP4-202ENST00000367740 K7EQZ3 153 aa5.9□□□□□ -1.46
VAMP4-202ENST00000367740 C1orf64Q8NEQ6 169 aa5.89□□□□□ -1.47
VAMP4-202ENST00000367740 TMEM258P61165 79 aa5.88□□□□□ -1.47
VAMP4-202ENST00000367740 CEND1Q8N111 149 aa5.88□□□□□ -1.47
VAMP4-202ENST00000367740 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
VAMP4-202ENST00000367740 NAA38Q9BRA0 125 aaKnown RBP5.87□□□□□ -1.47
VAMP4-202ENST00000367740 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
VAMP4-202ENST00000367740 FAM240AA0A1B0GVK7 77 aa5.83□□□□□ -1.48
VAMP4-202ENST00000367740 A8MUN3 132 aa5.83□□□□□ -1.48
VAMP4-202ENST00000367740 SCGB1C2P0DMR2 95 aa5.83□□□□□ -1.48
VAMP4-202ENST00000367740 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
VAMP4-202ENST00000367740 PSMB2P49721 201 aa5.8□□□□□ -1.48
VAMP4-202ENST00000367740 A0A1B0GW54 56 aa5.79□□□□□ -1.48
VAMP4-202ENST00000367740 FXYD2P54710 66 aa5.79□□□□□ -1.48
VAMP4-202ENST00000367740 ACYP1P07311 99 aa5.78□□□□□ -1.48
VAMP4-202ENST00000367740 COX7CP15954 63 aa5.78□□□□□ -1.48
VAMP4-202ENST00000367740 HCG22E2RYF7 251 aa5.76□□□□□ -1.49
VAMP4-202ENST00000367740 MT4P47944 62 aa5.76□□□□□ -1.49
VAMP4-202ENST00000367740 KRTAP5-7Q6L8G8 165 aa5.76□□□□□ -1.49
VAMP4-202ENST00000367740 COX6CP09669 75 aa5.75□□□□□ -1.49
VAMP4-202ENST00000367740 A0A087WVE0 104 aa5.74□□□□□ -1.49
VAMP4-202ENST00000367740 ATOX1O00244 68 aa5.74□□□□□ -1.49
VAMP4-202ENST00000367740 NREPQ16612 68 aa5.74□□□□□ -1.49
VAMP4-202ENST00000367740 LOC110117498A0A087WWA1 95 aa5.72□□□□□ -1.49
VAMP4-202ENST00000367740 H0YAA0 97 aa5.72□□□□□ -1.49
VAMP4-202ENST00000367740 K7ERJ3 54 aa5.72□□□□□ -1.49
VAMP4-202ENST00000367740 PDE6GP18545 87 aa5.72□□□□□ -1.49
VAMP4-202ENST00000367740 CXCL6P80162 114 aa5.71□□□□□ -1.5
VAMP4-202ENST00000367740 BAALC-AS2P0C853 105 aa5.7□□□□□ -1.5
VAMP4-202ENST00000367740 SERP1Q9Y6X1 66 aa5.69□□□□□ -1.5
VAMP4-202ENST00000367740 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
VAMP4-202ENST00000367740 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
VAMP4-202ENST00000367740 CASC2Q6XLA1 102 aa5.68□□□□□ -1.5
VAMP4-202ENST00000367740 LINC00643Q86TS7 51 aa5.68□□□□□ -1.5
VAMP4-202ENST00000367740 HIST1H4AP62805 103 aaKnown RBP5.67□□□□□ -1.5
VAMP4-202ENST00000367740 JMJD7-PLA2G4BH0Y9G9 81 aa5.65□□□□□ -1.5
VAMP4-202ENST00000367740 H3BT86 120 aa5.65□□□□□ -1.5
VAMP4-202ENST00000367740 SERP2Q8N6R1 65 aa5.65□□□□□ -1.5
VAMP4-202ENST00000367740 ADM2Q7Z4H4 148 aa5.64□□□□□ -1.51
VAMP4-202ENST00000367740 ATXN8Q156A1 80 aa5.63□□□□□ -1.51
VAMP4-202ENST00000367740 C14orf132Q9NPU4 83 aa5.63□□□□□ -1.51
VAMP4-202ENST00000367740 ATP5EP56381 51 aaPredicted RBP5.62□□□□□ -1.51
VAMP4-202ENST00000367740 Q8N9L7 120 aa5.61□□□□□ -1.51
VAMP4-202ENST00000367740 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.51
VAMP4-202ENST00000367740 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
VAMP4-202ENST00000367740 BPY2O14599 106 aa5.57□□□□□ -1.52
VAMP4-202ENST00000367740 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
VAMP4-202ENST00000367740 R4GN34 69 aa5.55□□□□□ -1.52
VAMP4-202ENST00000367740 NDUFC1O43677 76 aa5.53□□□□□ -1.52
VAMP4-202ENST00000367740 CYSTM1Q9H1C7 97 aa5.52□□□□□ -1.53
VAMP4-202ENST00000367740 KRTAP19-7Q3SYF9 63 aa5.51□□□□□ -1.53
VAMP4-202ENST00000367740 MT1EP04732 61 aa5.49□□□□□ -1.53
VAMP4-202ENST00000367740 M0QZ58 72 aa5.48□□□□□ -1.53
VAMP4-202ENST00000367740 ATP5EP2Q5VTU8 51 aa5.48□□□□□ -1.53
VAMP4-202ENST00000367740 KRTAP5-4Q6L8H1 288 aa5.48□□□□□ -1.53
VAMP4-202ENST00000367740 LINC01554Q52M75 96 aa5.45□□□□□ -1.54
VAMP4-202ENST00000367740 P0C880 135 aa5.44□□□□□ -1.54
VAMP4-202ENST00000367740 CYP4F30PQ9H0H9 118 aa5.43□□□□□ -1.54
VAMP4-202ENST00000367740 H7BZZ5 65 aa5.42□□□□□ -1.54
VAMP4-202ENST00000367740 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
VAMP4-202ENST00000367740 TRAV7A0A075B6U4 112 aa5.4□□□□□ -1.54
VAMP4-202ENST00000367740 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
VAMP4-202ENST00000367740 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
VAMP4-202ENST00000367740 TP53AIP1Q9HCN2 124 aa5.37□□□□□ -1.55
VAMP4-202ENST00000367740 Q1T7F1 81 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms