RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 H1FX-AS1Q4G0G2 97 aa10.29□□□□□ -0.76
SHISA4-201ENST00000362011 TMEM258P61165 79 aa10.25□□□□□ -0.77
SHISA4-201ENST00000362011 LORP23490 312 aaPredicted RBP10.24□□□□□ -0.77
SHISA4-201ENST00000362011 ACYP2P14621 99 aa10.22□□□□□ -0.77
SHISA4-201ENST00000362011 ATP5EP56381 51 aaPredicted RBP10.22□□□□□ -0.77
SHISA4-201ENST00000362011 KRTAP10-6P60371 365 aaPredicted RBP10.19□□□□□ -0.78
SHISA4-201ENST00000362011 S4R3F8 94 aa10.15□□□□□ -0.78
SHISA4-201ENST00000362011 FLGP20930 4061 aaPredicted RBP10.1□□□□□ -0.79
SHISA4-201ENST00000362011 LCA10Q71F78 164 aa10.08□□□□□ -0.8
SHISA4-201ENST00000362011 COA5Q86WW8 74 aa10.07□□□□□ -0.8
SHISA4-201ENST00000362011 CHKB-CPT1BH3BT56 60 aa10.06□□□□□ -0.8
SHISA4-201ENST00000362011 KRTAP3-3Q9BYR6 98 aa9.99□□□□□ -0.81
SHISA4-201ENST00000362011 M0R2T5 61 aa9.98□□□□□ -0.81
SHISA4-201ENST00000362011 CSAG1Q6PB30 78 aa9.95□□□□□ -0.82
SHISA4-201ENST00000362011 SPTSSBQ8NFR3 76 aa9.95□□□□□ -0.82
SHISA4-201ENST00000362011 SERP1Q9Y6X1 66 aa9.93□□□□□ -0.82
SHISA4-201ENST00000362011 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.87□□□□□ -0.83
SHISA4-201ENST00000362011 KRTAP9-7A8MTY7 169 aa9.86□□□□□ -0.83
SHISA4-201ENST00000362011 SSPOA2VEC9 5147 aa9.77□□□□□ -0.85
SHISA4-201ENST00000362011 RPS28P62857 69 aaKnown RBP9.74□□□□□ -0.85
SHISA4-201ENST00000362011 USH2AO75445 5202 aa9.73□□□□□ -0.85
SHISA4-201ENST00000362011 KRTAP9-8Q9BYQ0 159 aa9.73□□□□□ -0.85
SHISA4-201ENST00000362011 H0YAA0 97 aa9.69□□□□□ -0.86
SHISA4-201ENST00000362011 ADM2Q7Z4H4 148 aa9.63□□□□□ -0.87
SHISA4-201ENST00000362011 SMIM26A0A096LP01 95 aa9.62□□□□□ -0.87
SHISA4-201ENST00000362011 MT2AP02795 61 aa9.59□□□□□ -0.87
SHISA4-201ENST00000362011 SEC61GP60059 68 aa9.59□□□□□ -0.87
SHISA4-201ENST00000362011 FCGBPQ9Y6R7 5405 aaPredicted RBP9.58□□□□□ -0.88
SHISA4-201ENST00000362011 LINC01558Q9Y6Z2 57 aa9.57□□□□□ -0.88
SHISA4-201ENST00000362011 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
SHISA4-201ENST00000362011 A0A1B0GU69 56 aa9.54□□□□□ -0.88
SHISA4-201ENST00000362011 V9GYY9 64 aa9.54□□□□□ -0.88
SHISA4-201ENST00000362011 MT1FP04733 61 aa9.53□□□□□ -0.88
SHISA4-201ENST00000362011 KRTAP10-10P60014 251 aa9.53□□□□□ -0.88
SHISA4-201ENST00000362011 P0C880 135 aa9.52□□□□□ -0.89
SHISA4-201ENST00000362011 Q1T7F1 81 aa9.5□□□□□ -0.89
SHISA4-201ENST00000362011 KRTAP19-1Q8IUB9 90 aa9.5□□□□□ -0.89
SHISA4-201ENST00000362011 LCE2BO14633 110 aa9.49□□□□□ -0.89
SHISA4-201ENST00000362011 PRR15LQ9BU68 103 aa9.49□□□□□ -0.89
SHISA4-201ENST00000362011 KRTAP9-3Q9BYQ3 159 aa9.44□□□□□ -0.9
SHISA4-201ENST00000362011 CRIPTQ9P021 101 aa9.4□□□□□ -0.9
SHISA4-201ENST00000362011 MACF1Q9UPN3 7388 aaKnown RBP9.38□□□□□ -0.91
SHISA4-201ENST00000362011 A0A1B0GU33 70 aa9.33□□□□□ -0.92
SHISA4-201ENST00000362011 PSPHP1O15172 72 aa9.33□□□□□ -0.92
SHISA4-201ENST00000362011 R4GN34 69 aa9.32□□□□□ -0.92
SHISA4-201ENST00000362011 SYNE2Q8WXH0 6885 aaKnown RBP9.32□□□□□ -0.92
SHISA4-201ENST00000362011 M0QZ58 72 aa9.3□□□□□ -0.92
SHISA4-201ENST00000362011 Q5VV11 94 aa9.26□□□□□ -0.93
SHISA4-201ENST00000362011 KRTAP19-6Q3LI70 58 aa9.25□□□□□ -0.93
SHISA4-201ENST00000362011 SPRR2GQ9BYE4 73 aa9.25□□□□□ -0.93
SHISA4-201ENST00000362011 KRTAP13-4Q3LI77 160 aa9.21□□□□□ -0.94
SHISA4-201ENST00000362011 UQCR11O14957 56 aa9.19□□□□□ -0.94
SHISA4-201ENST00000362011 SPATA8Q6RVD6 105 aa9.18□□□□□ -0.94
SHISA4-201ENST00000362011 LINC01554Q52M75 96 aa9.12□□□□□ -0.95
SHISA4-201ENST00000362011 KRTAP6-3Q3LI67 103 aa9.09□□□□□ -0.95
SHISA4-201ENST00000362011 A6NED7 52 aa9.08□□□□□ -0.96
SHISA4-201ENST00000362011 KRTAP19-8Q3LI54 63 aa9.07□□□□□ -0.96
SHISA4-201ENST00000362011 MIR22HGQ0VDD5 57 aa9.05□□□□□ -0.96
SHISA4-201ENST00000362011 A0A0D9SG42 100 aa9.04□□□□□ -0.96
SHISA4-201ENST00000362011 A8MU10 97 aa9□□□□□ -0.97
SHISA4-201ENST00000362011 A6NN06 94 aa8.97□□□□□ -0.97
SHISA4-201ENST00000362011 MT1BP07438 61 aa8.96□□□□□ -0.98
SHISA4-201ENST00000362011 PLAC4Q8WY50 150 aa8.91□□□□□ -0.98
SHISA4-201ENST00000362011 KRTAP12-1P59990 96 aa8.87□□□□□ -0.99
SHISA4-201ENST00000362011 CDC42SE1Q9NRR8 79 aa8.87□□□□□ -0.99
SHISA4-201ENST00000362011 SPINT4Q6UDR6 99 aa8.86□□□□□ -0.99
SHISA4-201ENST00000362011 NEBP20929 6669 aa8.82□□□□□ -1
SHISA4-201ENST00000362011 KRTAP12-2P59991 146 aa8.81□□□□□ -1
SHISA4-201ENST00000362011 K7ERS5 55 aa8.74□□□□□ -1.01
SHISA4-201ENST00000362011 BRK1Q8WUW1 75 aa8.74□□□□□ -1.01
SHISA4-201ENST00000362011 CAMK2N1Q7Z7J9 78 aa8.71□□□□□ -1.02
SHISA4-201ENST00000362011 MUC12Q9UKN1 5478 aa8.69□□□□□ -1.02
SHISA4-201ENST00000362011 KRTAP10-5P60370 271 aa8.59□□□□□ -1.03
SHISA4-201ENST00000362011 KRTAP20-1Q3LI63 56 aa8.59□□□□□ -1.03
SHISA4-201ENST00000362011 MT1XP80297 61 aa8.58□□□□□ -1.04
SHISA4-201ENST00000362011 PRO2289Q9P1D8 64 aa8.58□□□□□ -1.04
SHISA4-201ENST00000362011 KRTAP5-9P26371 169 aa8.52□□□□□ -1.05
SHISA4-201ENST00000362011 C10orf95Q9H7T3 257 aa8.4□□□□□ -1.06
SHISA4-201ENST00000362011 KMT2DO14686 5537 aa8.4□□□□□ -1.07
SHISA4-201ENST00000362011 PRO0628Q9UI54 55 aa8.36□□□□□ -1.07
SHISA4-201ENST00000362011 MDN1Q9NU22 5596 aa8.35□□□□□ -1.07
SHISA4-201ENST00000362011 ROMO1P60602 79 aa8.29□□□□□ -1.08
SHISA4-201ENST00000362011 KRTAP2-3P0C7H8 128 aa8.28□□□□□ -1.08
SHISA4-201ENST00000362011 KRTAP2-4Q9BYR9 128 aa8.28□□□□□ -1.08
SHISA4-201ENST00000362011 TNP1P09430 55 aa8.24□□□□□ -1.09
SHISA4-201ENST00000362011 PMAIP1Q13794 54 aa8.24□□□□□ -1.09
SHISA4-201ENST00000362011 KRTAP10-7P60409 375 aaPredicted RBP8.22□□□□□ -1.09
SHISA4-201ENST00000362011 KRTAP10-12P60413 245 aa8.16□□□□□ -1.1
SHISA4-201ENST00000362011 KRTAP25-1Q3LHN0 102 aa8.16□□□□□ -1.1
SHISA4-201ENST00000362011 SPRR2FQ96RM1 72 aa8.04□□□□□ -1.12
SHISA4-201ENST00000362011 SPRR2EP22531 72 aa8.03□□□□□ -1.12
SHISA4-201ENST00000362011 SPRR2BP35325 72 aa8.03□□□□□ -1.12
SHISA4-201ENST00000362011 SPRR2AP35326 72 aa8.03□□□□□ -1.12
SHISA4-201ENST00000362011 KRTAP2-2Q9BYT5 123 aa7.99□□□□□ -1.13
SHISA4-201ENST00000362011 KRTAP2-1Q9BYU5 128 aa7.99□□□□□ -1.13
SHISA4-201ENST00000362011 KRTAP4-8A0A0G2JLE6 195 aa7.97□□□□□ -1.13
SHISA4-201ENST00000362011 KRTAP4-8Q9BYQ9 185 aa7.97□□□□□ -1.13
SHISA4-201ENST00000362011 LCE1AQ5T7P2 110 aa7.94□□□□□ -1.14
SHISA4-201ENST00000362011 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
SHISA4-201ENST00000362011 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms