RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 RBM12B-AS1Q9P1G2 102 aa5.61□□□□□ -1.51
TRAPPC4-201ENST00000359005 MPLKIPQ8TAP9 179 aa5.6□□□□□ -1.51
TRAPPC4-201ENST00000359005 PRR15LQ9BU68 103 aa5.59□□□□□ -1.51
TRAPPC4-201ENST00000359005 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC4-201ENST00000359005 SEC61GP60059 68 aa5.54□□□□□ -1.52
TRAPPC4-201ENST00000359005 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
TRAPPC4-201ENST00000359005 KRTAP9-2Q9BYQ4 174 aa5.51□□□□□ -1.53
TRAPPC4-201ENST00000359005 H1FX-AS1Q4G0G2 97 aa5.5□□□□□ -1.53
TRAPPC4-201ENST00000359005 A0A1B0GU69 56 aa5.49□□□□□ -1.53
TRAPPC4-201ENST00000359005 S4R3F8 94 aa5.48□□□□□ -1.53
TRAPPC4-201ENST00000359005 LCE2CQ5TA81 110 aa5.47□□□□□ -1.53
TRAPPC4-201ENST00000359005 KRTAP3-3Q9BYR6 98 aa5.47□□□□□ -1.53
TRAPPC4-201ENST00000359005 KRTAP3-2Q9BYR7 98 aa5.47□□□□□ -1.53
TRAPPC4-201ENST00000359005 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
TRAPPC4-201ENST00000359005 PSPHP1O15172 72 aa5.46□□□□□ -1.54
TRAPPC4-201ENST00000359005 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
TRAPPC4-201ENST00000359005 Q5VV11 94 aa5.41□□□□□ -1.54
TRAPPC4-201ENST00000359005 A6NED7 52 aa5.4□□□□□ -1.54
TRAPPC4-201ENST00000359005 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
TRAPPC4-201ENST00000359005 FLGP20930 4061 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC4-201ENST00000359005 LCA10Q71F78 164 aa5.37□□□□□ -1.55
TRAPPC4-201ENST00000359005 FSIP2Q5CZC0 6907 aa5.37□□□□□ -1.55
TRAPPC4-201ENST00000359005 UQCR11O14957 56 aa5.36□□□□□ -1.55
TRAPPC4-201ENST00000359005 MT1HP80294 61 aa5.35□□□□□ -1.55
TRAPPC4-201ENST00000359005 BRK1Q8WUW1 75 aa5.35□□□□□ -1.55
TRAPPC4-201ENST00000359005 KRTAP9-6A0A140TA67 174 aa5.32□□□□□ -1.56
TRAPPC4-201ENST00000359005 CDC42SE1Q9NRR8 79 aa5.3□□□□□ -1.56
TRAPPC4-201ENST00000359005 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
TRAPPC4-201ENST00000359005 A0A1B0GU33 70 aa5.28□□□□□ -1.56
TRAPPC4-201ENST00000359005 H0YAA0 97 aa5.27□□□□□ -1.57
TRAPPC4-201ENST00000359005 MIR22HGQ0VDD5 57 aa5.26□□□□□ -1.57
TRAPPC4-201ENST00000359005 LORP23490 312 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC4-201ENST00000359005 KRTAP10-6P60371 365 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC4-201ENST00000359005 SPATA8Q6RVD6 105 aa5.23□□□□□ -1.57
TRAPPC4-201ENST00000359005 ADM2Q7Z4H4 148 aa5.2□□□□□ -1.58
TRAPPC4-201ENST00000359005 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
TRAPPC4-201ENST00000359005 K7ERS5 55 aa5.18□□□□□ -1.58
TRAPPC4-201ENST00000359005 M0QZ58 72 aa5.16□□□□□ -1.58
TRAPPC4-201ENST00000359005 M0R2T5 61 aa5.15□□□□□ -1.59
TRAPPC4-201ENST00000359005 USH2AO75445 5202 aa5.12□□□□□ -1.59
TRAPPC4-201ENST00000359005 PMAIP1Q13794 54 aa5.1□□□□□ -1.59
TRAPPC4-201ENST00000359005 SSPOA2VEC9 5147 aa5.09□□□□□ -1.59
TRAPPC4-201ENST00000359005 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.59
TRAPPC4-201ENST00000359005 CRIPTQ9P021 101 aa5.09□□□□□ -1.59
TRAPPC4-201ENST00000359005 P0C880 135 aa5.08□□□□□ -1.6
TRAPPC4-201ENST00000359005 R4GN34 69 aa5.08□□□□□ -1.6
TRAPPC4-201ENST00000359005 A8MU10 97 aa5.01□□□□□ -1.61
TRAPPC4-201ENST00000359005 A0A0D9SG42 100 aa4.98□□□□□ -1.61
TRAPPC4-201ENST00000359005 MT2AP02795 61 aa4.98□□□□□ -1.61
TRAPPC4-201ENST00000359005 SVIPQ8NHG7 77 aa4.97□□□□□ -1.61
TRAPPC4-201ENST00000359005 A6NN06 94 aa4.96□□□□□ -1.62
TRAPPC4-201ENST00000359005 MT1FP04733 61 aa4.96□□□□□ -1.62
TRAPPC4-201ENST00000359005 KRTAP13-4Q3LI77 160 aa4.96□□□□□ -1.62
TRAPPC4-201ENST00000359005 FCGBPQ9Y6R7 5405 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC4-201ENST00000359005 LCE2BO14633 110 aa4.93□□□□□ -1.62
TRAPPC4-201ENST00000359005 KRTAP9-3Q9BYQ3 159 aa4.92□□□□□ -1.62
TRAPPC4-201ENST00000359005 LINC01554Q52M75 96 aa4.91□□□□□ -1.62
TRAPPC4-201ENST00000359005 SPINT4Q6UDR6 99 aa4.91□□□□□ -1.62
TRAPPC4-201ENST00000359005 KTN1-AS1Q86SY8 53 aa4.9□□□□□ -1.63
TRAPPC4-201ENST00000359005 KRTAP10-10P60014 251 aa4.87□□□□□ -1.63
TRAPPC4-201ENST00000359005 KRTAP12-1P59990 96 aa4.86□□□□□ -1.63
TRAPPC4-201ENST00000359005 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC4-201ENST00000359005 ROMO1P60602 79 aa4.83□□□□□ -1.64
TRAPPC4-201ENST00000359005 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
TRAPPC4-201ENST00000359005 KRTAP12-2P59991 146 aa4.82□□□□□ -1.64
TRAPPC4-201ENST00000359005 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
TRAPPC4-201ENST00000359005 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
TRAPPC4-201ENST00000359005 CAMK2N1Q7Z7J9 78 aa4.79□□□□□ -1.64
TRAPPC4-201ENST00000359005 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
TRAPPC4-201ENST00000359005 MACF1Q9UPN3 7388 aaKnown RBP4.77□□□□□ -1.65
TRAPPC4-201ENST00000359005 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
TRAPPC4-201ENST00000359005 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
TRAPPC4-201ENST00000359005 KRTAP19-8Q3LI54 63 aa4.64□□□□□ -1.67
TRAPPC4-201ENST00000359005 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
TRAPPC4-201ENST00000359005 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
TRAPPC4-201ENST00000359005 TNP1P09430 55 aa4.57□□□□□ -1.68
TRAPPC4-201ENST00000359005 PRO2289Q9P1D8 64 aa4.57□□□□□ -1.68
TRAPPC4-201ENST00000359005 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
TRAPPC4-201ENST00000359005 PP632Q6XCG6 107 aa4.55□□□□□ -1.68
TRAPPC4-201ENST00000359005 MT1BP07438 61 aa4.54□□□□□ -1.68
TRAPPC4-201ENST00000359005 NEBP20929 6669 aa4.52□□□□□ -1.69
TRAPPC4-201ENST00000359005 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
TRAPPC4-201ENST00000359005 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
TRAPPC4-201ENST00000359005 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
TRAPPC4-201ENST00000359005 KRTAP10-5P60370 271 aa4.4□□□□□ -1.71
TRAPPC4-201ENST00000359005 KMT2DO14686 5537 aa4.4□□□□□ -1.71
TRAPPC4-201ENST00000359005 MT1XP80297 61 aa4.38□□□□□ -1.71
TRAPPC4-201ENST00000359005 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
TRAPPC4-201ENST00000359005 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
TRAPPC4-201ENST00000359005 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
TRAPPC4-201ENST00000359005 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
TRAPPC4-201ENST00000359005 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
TRAPPC4-201ENST00000359005 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC4-201ENST00000359005 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
TRAPPC4-201ENST00000359005 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
TRAPPC4-201ENST00000359005 SPRR2FQ96RM1 72 aa4.12□□□□□ -1.75
TRAPPC4-201ENST00000359005 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
TRAPPC4-201ENST00000359005 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
TRAPPC4-201ENST00000359005 SPRR2EP22531 72 aa4.06□□□□□ -1.76
TRAPPC4-201ENST00000359005 SPRR2BP35325 72 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms