RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 C1orf64Q8NEQ6 169 aa7.06□□□□□ -1.28
DDX55-202ENST00000354291 GTF2H5Q6ZYL4 71 aa7.04□□□□□ -1.28
DDX55-202ENST00000354291 F8W1H4 67 aa7.03□□□□□ -1.28
DDX55-202ENST00000354291 IMUPQ9GZP8 106 aa7.03□□□□□ -1.28
DDX55-202ENST00000354291 GPR98Q8WXG9 6306 aa7.02□□□□□ -1.29
DDX55-202ENST00000354291 SPRR2GQ9BYE4 73 aa7.02□□□□□ -1.29
DDX55-202ENST00000354291 LCA10Q71F78 164 aa7.01□□□□□ -1.29
DDX55-202ENST00000354291 ETDBQ3ZM63 59 aa6.98□□□□□ -1.29
DDX55-202ENST00000354291 PCP4L1A6NKN8 68 aa6.95□□□□□ -1.3
DDX55-202ENST00000354291 CYP4F30PQ9H0H9 118 aa6.94□□□□□ -1.3
DDX55-202ENST00000354291 LCE1AQ5T7P2 110 aa6.93□□□□□ -1.3
DDX55-202ENST00000354291 SPRR2DP22532 72 aa6.92□□□□□ -1.3
DDX55-202ENST00000354291 KLKP1Q107X0 134 aa6.9□□□□□ -1.3
DDX55-202ENST00000354291 TRAV22A0A0B4J277 110 aa6.89□□□□□ -1.31
DDX55-202ENST00000354291 KRTAP3-3Q9BYR6 98 aa6.89□□□□□ -1.31
DDX55-202ENST00000354291 LOC101927531A0A1B0GV80 90 aa6.88□□□□□ -1.31
DDX55-202ENST00000354291 ACYP1P07311 99 aa6.88□□□□□ -1.31
DDX55-202ENST00000354291 KRTAP8-1Q8IUC2 63 aa6.84□□□□□ -1.31
DDX55-202ENST00000354291 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
DDX55-202ENST00000354291 ATP5EP2Q5VTU8 51 aa6.82□□□□□ -1.32
DDX55-202ENST00000354291 A0A087WVE0 104 aa6.81□□□□□ -1.32
DDX55-202ENST00000354291 FAM240AA0A1B0GVK7 77 aa6.81□□□□□ -1.32
DDX55-202ENST00000354291 UQCRQO14949 82 aa6.81□□□□□ -1.32
DDX55-202ENST00000354291 ATOX1O00244 68 aa6.8□□□□□ -1.32
DDX55-202ENST00000354291 HIST1H4AP62805 103 aaKnown RBP6.8□□□□□ -1.32
DDX55-202ENST00000354291 LCE3BQ5TA77 95 aa6.78□□□□□ -1.32
DDX55-202ENST00000354291 NDUFC1O43677 76 aa6.77□□□□□ -1.33
DDX55-202ENST00000354291 H0Y9P7 68 aa6.76□□□□□ -1.33
DDX55-202ENST00000354291 H0YAA0 97 aa6.72□□□□□ -1.33
DDX55-202ENST00000354291 A8MUN3 132 aa6.71□□□□□ -1.34
DDX55-202ENST00000354291 LINC00643Q86TS7 51 aa6.68□□□□□ -1.34
DDX55-202ENST00000354291 PRO2289Q9P1D8 64 aa6.68□□□□□ -1.34
DDX55-202ENST00000354291 LINC00208Q96KT6 92 aa6.65□□□□□ -1.34
DDX55-202ENST00000354291 DSTQ03001 7570 aaKnown RBP6.63□□□□□ -1.35
DDX55-202ENST00000354291 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
DDX55-202ENST00000354291 MP68P56378 58 aa6.62□□□□□ -1.35
DDX55-202ENST00000354291 MT1XP80297 61 aa6.62□□□□□ -1.35
DDX55-202ENST00000354291 KRTAP4-8A0A0G2JLE6 195 aa6.6□□□□□ -1.35
DDX55-202ENST00000354291 A0A1B0GV90 55 aa6.6□□□□□ -1.35
DDX55-202ENST00000354291 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
DDX55-202ENST00000354291 OCR1Q9BZK8 76 aa6.59□□□□□ -1.35
DDX55-202ENST00000354291 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
DDX55-202ENST00000354291 KRTAP4-9Q9BYQ8 210 aa6.53□□□□□ -1.36
DDX55-202ENST00000354291 H3BPC8 53 aa6.52□□□□□ -1.37
DDX55-202ENST00000354291 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
DDX55-202ENST00000354291 C20orf197Q8N268 126 aa6.5□□□□□ -1.37
DDX55-202ENST00000354291 R4GN34 69 aa6.5□□□□□ -1.37
DDX55-202ENST00000354291 J3QR89 54 aa6.45□□□□□ -1.38
DDX55-202ENST00000354291 P0C880 135 aa6.45□□□□□ -1.38
DDX55-202ENST00000354291 SCGB1A1P11684 91 aa6.45□□□□□ -1.38
DDX55-202ENST00000354291 DMAC1Q96GE9 116 aa6.45□□□□□ -1.38
DDX55-202ENST00000354291 M0QZ58 72 aa6.42□□□□□ -1.38
DDX55-202ENST00000354291 KRTAP3-2Q9BYR7 98 aa6.36□□□□□ -1.39
DDX55-202ENST00000354291 TRAV7A0A075B6U4 112 aa6.34□□□□□ -1.39
DDX55-202ENST00000354291 KRTAP10-7P60409 375 aaPredicted RBP6.33□□□□□ -1.4
DDX55-202ENST00000354291 LINC01554Q52M75 96 aa6.33□□□□□ -1.4
DDX55-202ENST00000354291 ACYP2P14621 99 aa6.32□□□□□ -1.4
DDX55-202ENST00000354291 SPTSSBQ8NFR3 76 aa6.28□□□□□ -1.4
DDX55-202ENST00000354291 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
DDX55-202ENST00000354291 KRTAP10-12P60413 245 aa6.26□□□□□ -1.41
DDX55-202ENST00000354291 SMIM20Q8N5G0 67 aa6.26□□□□□ -1.41
DDX55-202ENST00000354291 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
DDX55-202ENST00000354291 AHNAK2Q8IVF2 5795 aa6.24□□□□□ -1.41
DDX55-202ENST00000354291 K7ERU9 68 aa6.23□□□□□ -1.41
DDX55-202ENST00000354291 MT-ATP8P03928 68 aa6.21□□□□□ -1.42
DDX55-202ENST00000354291 CHKB-CPT1BH3BT56 60 aa6.18□□□□□ -1.42
DDX55-202ENST00000354291 MT4P47944 62 aa6.14□□□□□ -1.43
DDX55-202ENST00000354291 KRTAP5-10Q6L8G5 202 aa6.12□□□□□ -1.43
DDX55-202ENST00000354291 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
DDX55-202ENST00000354291 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
DDX55-202ENST00000354291 SPANXA2-OT1Q8N9U9 137 aa6.06□□□□□ -1.44
DDX55-202ENST00000354291 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
DDX55-202ENST00000354291 KRTAP19-3Q7Z4W3 81 aa6□□□□□ -1.45
DDX55-202ENST00000354291 SERP2Q8N6R1 65 aa5.97□□□□□ -1.45
DDX55-202ENST00000354291 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.46
DDX55-202ENST00000354291 KRTAP5-7Q6L8G8 165 aa5.96□□□□□ -1.46
DDX55-202ENST00000354291 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
DDX55-202ENST00000354291 CYSTM1Q9H1C7 97 aa5.94□□□□□ -1.46
DDX55-202ENST00000354291 KRTAP19-7Q3SYF9 63 aa5.91□□□□□ -1.46
DDX55-202ENST00000354291 MT1EP04732 61 aa5.9□□□□□ -1.46
DDX55-202ENST00000354291 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
DDX55-202ENST00000354291 COA5Q86WW8 74 aa5.88□□□□□ -1.47
DDX55-202ENST00000354291 SEC61GP60059 68 aa5.87□□□□□ -1.47
DDX55-202ENST00000354291 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
DDX55-202ENST00000354291 SERP1Q9Y6X1 66 aa5.86□□□□□ -1.47
DDX55-202ENST00000354291 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
DDX55-202ENST00000354291 A0A0D9SG42 100 aa5.8□□□□□ -1.48
DDX55-202ENST00000354291 MT1GP13640 62 aa5.78□□□□□ -1.48
DDX55-202ENST00000354291 KRTAP5-4Q6L8H1 288 aa5.77□□□□□ -1.49
DDX55-202ENST00000354291 A0A1B0GU33 70 aa5.76□□□□□ -1.49
DDX55-202ENST00000354291 COX7CP15954 63 aa5.76□□□□□ -1.49
DDX55-202ENST00000354291 SPATA8Q6RVD6 105 aa5.76□□□□□ -1.49
DDX55-202ENST00000354291 SPINT4Q6UDR6 99 aa5.74□□□□□ -1.49
DDX55-202ENST00000354291 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
DDX55-202ENST00000354291 H7BZZ5 65 aa5.68□□□□□ -1.5
DDX55-202ENST00000354291 MT1MQ8N339 61 aa5.68□□□□□ -1.5
DDX55-202ENST00000354291 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
DDX55-202ENST00000354291 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
DDX55-202ENST00000354291 ANAPC13Q9BS18 74 aa5.62□□□□□ -1.51
DDX55-202ENST00000354291 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms