RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 RBM12B-AS1Q9P1G2 102 aa11.35□□□□□ -0.59
TNFRSF10B-202ENST00000347739 H1FX-AS1Q4G0G2 97 aa11.32□□□□□ -0.6
TNFRSF10B-202ENST00000347739 S4R3F8 94 aa11.29□□□□□ -0.6
TNFRSF10B-202ENST00000347739 LCA10Q71F78 164 aa11.29□□□□□ -0.6
TNFRSF10B-202ENST00000347739 A6NED7 52 aa11.28□□□□□ -0.6
TNFRSF10B-202ENST00000347739 KRTAP3-3Q9BYR6 98 aa11.27□□□□□ -0.61
TNFRSF10B-202ENST00000347739 PRO0628Q9UI54 55 aa11.26□□□□□ -0.61
TNFRSF10B-202ENST00000347739 SEC61GP60059 68 aa11.25□□□□□ -0.61
TNFRSF10B-202ENST00000347739 MUC17Q685J3 4493 aa11.23□□□□□ -0.61
TNFRSF10B-202ENST00000347739 HERC1Q15751 4861 aa11.21□□□□□ -0.61
TNFRSF10B-202ENST00000347739 KRTAP4-1Q9BYQ7 146 aa11.21□□□□□ -0.61
TNFRSF10B-202ENST00000347739 HMCN2Q8NDA2 5059 aa11.17□□□□□ -0.62
TNFRSF10B-202ENST00000347739 CDC42SE1Q9NRR8 79 aa11.16□□□□□ -0.62
TNFRSF10B-202ENST00000347739 UQCR11O14957 56 aa11.12□□□□□ -0.63
TNFRSF10B-202ENST00000347739 A8MU10 97 aa11.09□□□□□ -0.63
TNFRSF10B-202ENST00000347739 SPATA8Q6RVD6 105 aa11.03□□□□□ -0.64
TNFRSF10B-202ENST00000347739 KRTAP19-2Q3LHN2 52 aa11□□□□□ -0.65
TNFRSF10B-202ENST00000347739 CSAG1Q6PB30 78 aa11□□□□□ -0.65
TNFRSF10B-202ENST00000347739 MIR22HGQ0VDD5 57 aa10.99□□□□□ -0.65
TNFRSF10B-202ENST00000347739 A0A1B0GU33 70 aa10.97□□□□□ -0.65
TNFRSF10B-202ENST00000347739 KRTAP10-6P60371 365 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF10B-202ENST00000347739 KRTAP3-2Q9BYR7 98 aa10.93□□□□□ -0.66
TNFRSF10B-202ENST00000347739 H0YAA0 97 aa10.86□□□□□ -0.67
TNFRSF10B-202ENST00000347739 ADM2Q7Z4H4 148 aa10.81□□□□□ -0.68
TNFRSF10B-202ENST00000347739 P0C880 135 aa10.8□□□□□ -0.68
TNFRSF10B-202ENST00000347739 MUC2Q02817 5179 aa10.8□□□□□ -0.68
TNFRSF10B-202ENST00000347739 PMAIP1Q13794 54 aa10.74□□□□□ -0.69
TNFRSF10B-202ENST00000347739 FLGP20930 4061 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF10B-202ENST00000347739 A6NN06 94 aa10.67□□□□□ -0.7
TNFRSF10B-202ENST00000347739 KRTAP13-4Q3LI77 160 aa10.67□□□□□ -0.7
TNFRSF10B-202ENST00000347739 LCE2CQ5TA81 110 aa10.61□□□□□ -0.71
TNFRSF10B-202ENST00000347739 M0QZ58 72 aa10.57□□□□□ -0.72
TNFRSF10B-202ENST00000347739 RNF213Q63HN8 5207 aa10.56□□□□□ -0.72
TNFRSF10B-202ENST00000347739 UBR4Q5T4S7 5183 aa10.55□□□□□ -0.72
TNFRSF10B-202ENST00000347739 A0A0D9SG42 100 aa10.45□□□□□ -0.74
TNFRSF10B-202ENST00000347739 K7ERS5 55 aa10.44□□□□□ -0.74
TNFRSF10B-202ENST00000347739 R4GN34 69 aa10.41□□□□□ -0.74
TNFRSF10B-202ENST00000347739 KTN1-AS1Q86SY8 53 aa10.39□□□□□ -0.75
TNFRSF10B-202ENST00000347739 LORP23490 312 aaPredicted RBP10.38□□□□□ -0.75
TNFRSF10B-202ENST00000347739 MT1HP80294 61 aa10.38□□□□□ -0.75
TNFRSF10B-202ENST00000347739 FAT4Q6V0I7 4981 aa10.34□□□□□ -0.75
TNFRSF10B-202ENST00000347739 KRTAP12-1P59990 96 aa10.29□□□□□ -0.76
TNFRSF10B-202ENST00000347739 M0R2T5 61 aa10.27□□□□□ -0.77
TNFRSF10B-202ENST00000347739 KRTAP12-2P59991 146 aa10.27□□□□□ -0.77
TNFRSF10B-202ENST00000347739 CRIPTQ9P021 101 aa10.26□□□□□ -0.77
TNFRSF10B-202ENST00000347739 LINC01554Q52M75 96 aa10.2□□□□□ -0.78
TNFRSF10B-202ENST00000347739 SPINT4Q6UDR6 99 aa10.2□□□□□ -0.78
TNFRSF10B-202ENST00000347739 ROMO1P60602 79 aa10.07□□□□□ -0.8
TNFRSF10B-202ENST00000347739 KRTAP9-8Q9BYQ0 159 aa10.04□□□□□ -0.8
TNFRSF10B-202ENST00000347739 MT2AP02795 61 aa10.03□□□□□ -0.8
TNFRSF10B-202ENST00000347739 PRAC1Q96KF2 57 aa10.02□□□□□ -0.81
TNFRSF10B-202ENST00000347739 SPRR2GQ9BYE4 73 aa9.99□□□□□ -0.81
TNFRSF10B-202ENST00000347739 MT1FP04733 61 aa9.98□□□□□ -0.81
TNFRSF10B-202ENST00000347739 KRTAP10-10P60014 251 aa9.94□□□□□ -0.82
TNFRSF10B-202ENST00000347739 KRTAP19-1Q8IUB9 90 aa9.92□□□□□ -0.82
TNFRSF10B-202ENST00000347739 LCE2AQ5TA79 106 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF10B-202ENST00000347739 CAMK2N1Q7Z7J9 78 aa9.77□□□□□ -0.85
TNFRSF10B-202ENST00000347739 KRTAP25-1Q3LHN0 102 aa9.76□□□□□ -0.85
TNFRSF10B-202ENST00000347739 C10orf95Q9H7T3 257 aa9.71□□□□□ -0.85
TNFRSF10B-202ENST00000347739 KRTAP19-8Q3LI54 63 aa9.68□□□□□ -0.86
TNFRSF10B-202ENST00000347739 PLAC4Q8WY50 150 aa9.68□□□□□ -0.86
TNFRSF10B-202ENST00000347739 KRTAP9-3Q9BYQ3 159 aa9.68□□□□□ -0.86
TNFRSF10B-202ENST00000347739 MT1BP07438 61 aa9.52□□□□□ -0.89
TNFRSF10B-202ENST00000347739 TNP1P09430 55 aa9.36□□□□□ -0.91
TNFRSF10B-202ENST00000347739 LCE2BO14633 110 aa9.34□□□□□ -0.91
TNFRSF10B-202ENST00000347739 MT1XP80297 61 aa9.28□□□□□ -0.92
TNFRSF10B-202ENST00000347739 KRTAP10-5P60370 271 aa9.26□□□□□ -0.93
TNFRSF10B-202ENST00000347739 PP632Q6XCG6 107 aa9.26□□□□□ -0.93
TNFRSF10B-202ENST00000347739 KRTAP23-1A1A580 65 aa9.21□□□□□ -0.94
TNFRSF10B-202ENST00000347739 PRO2289Q9P1D8 64 aa9.13□□□□□ -0.95
TNFRSF10B-202ENST00000347739 H3BS24 57 aa9.09□□□□□ -0.95
TNFRSF10B-202ENST00000347739 USH2AO75445 5202 aa8.99□□□□□ -0.97
TNFRSF10B-202ENST00000347739 LCE3AQ5TA76 89 aa8.91□□□□□ -0.98
TNFRSF10B-202ENST00000347739 KRTAP10-7P60409 375 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF10B-202ENST00000347739 KRTAP10-12P60413 245 aa8.87□□□□□ -0.99
TNFRSF10B-202ENST00000347739 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
TNFRSF10B-202ENST00000347739 KRTAP8-1Q8IUC2 63 aa8.78□□□□□ -1
TNFRSF10B-202ENST00000347739 SSPOA2VEC9 5147 aa8.75□□□□□ -1.01
TNFRSF10B-202ENST00000347739 KRTAP19-6Q3LI70 58 aa8.73□□□□□ -1.01
TNFRSF10B-202ENST00000347739 KRTAP15-1Q3LI76 137 aa8.7□□□□□ -1.02
TNFRSF10B-202ENST00000347739 KRTAP12-3P60328 96 aa8.56□□□□□ -1.04
TNFRSF10B-202ENST00000347739 KRTAP4-8A0A0G2JLE6 195 aa8.47□□□□□ -1.05
TNFRSF10B-202ENST00000347739 KRTAP4-8Q9BYQ9 185 aa8.47□□□□□ -1.05
TNFRSF10B-202ENST00000347739 KRTAP9-2Q9BYQ4 174 aa8.44□□□□□ -1.06
TNFRSF10B-202ENST00000347739 KRTAP19-5Q3LI72 72 aa8.42□□□□□ -1.06
TNFRSF10B-202ENST00000347739 KMT2DO14686 5537 aa8.37□□□□□ -1.07
TNFRSF10B-202ENST00000347739 FSIP2Q5CZC0 6907 aa8.36□□□□□ -1.07
TNFRSF10B-202ENST00000347739 SPRR5A0A1B0GTR4 108 aa8.33□□□□□ -1.08
TNFRSF10B-202ENST00000347739 KRTAP19-7Q3SYF9 63 aa8.27□□□□□ -1.09
TNFRSF10B-202ENST00000347739 FCGBPQ9Y6R7 5405 aaPredicted RBP8.25□□□□□ -1.09
TNFRSF10B-202ENST00000347739 LUZP6Q538Z0 58 aa8.12□□□□□ -1.11
TNFRSF10B-202ENST00000347739 NDUFAF8A1L188 74 aa8.11□□□□□ -1.11
TNFRSF10B-202ENST00000347739 MT1EP04732 61 aa8.1□□□□□ -1.11
TNFRSF10B-202ENST00000347739 KRTAP9-6A0A140TA67 174 aa8.09□□□□□ -1.11
TNFRSF10B-202ENST00000347739 KRTAP19-4Q3LI73 84 aa8.03□□□□□ -1.12
TNFRSF10B-202ENST00000347739 CRCT1Q9UGL9 99 aa8.03□□□□□ -1.12
TNFRSF10B-202ENST00000347739 LCE3CQ5T5A8 94 aa8.02□□□□□ -1.13
TNFRSF10B-202ENST00000347739 MT1LQ93083 61 aa7.98□□□□□ -1.13
TNFRSF10B-202ENST00000347739 A0A0A0MQY5 61 aa7.95□□□□□ -1.14
TNFRSF10B-202ENST00000347739 SPRR2FQ96RM1 72 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms