RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 COA5Q86WW8 74 aa5.28□□□□□ -1.56
ATG4A-202ENST00000345734 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
ATG4A-202ENST00000345734 RETNLBQ9BQ08 111 aa5.27□□□□□ -1.57
ATG4A-202ENST00000345734 KIAA1109Q2LD37 5005 aa5.27□□□□□ -1.57
ATG4A-202ENST00000345734 FAT3Q8TDW7 4589 aa5.27□□□□□ -1.57
ATG4A-202ENST00000345734 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
ATG4A-202ENST00000345734 LINC00304Q8N9R0 145 aa5.24□□□□□ -1.57
ATG4A-202ENST00000345734 IGLV7-46A0A075B6I9 117 aa5.24□□□□□ -1.57
ATG4A-202ENST00000345734 SPINK1P00995 79 aa5.23□□□□□ -1.57
ATG4A-202ENST00000345734 SPINK7P58062 85 aa5.23□□□□□ -1.57
ATG4A-202ENST00000345734 MRPL34Q9BQ48 92 aaKnown RBP5.23□□□□□ -1.57
ATG4A-202ENST00000345734 H0Y9P7 68 aa5.21□□□□□ -1.57
ATG4A-202ENST00000345734 KRTAP17-1Q9BYP8 105 aa5.21□□□□□ -1.57
ATG4A-202ENST00000345734 Q5VSD8 79 aa5.21□□□□□ -1.58
ATG4A-202ENST00000345734 KRTAP4-11Q9BYQ6 195 aa5.21□□□□□ -1.58
ATG4A-202ENST00000345734 SPAG11AQ6PDA7 123 aa5.19□□□□□ -1.58
ATG4A-202ENST00000345734 TP53AIP1Q9HCN2 124 aa5.18□□□□□ -1.58
ATG4A-202ENST00000345734 MYCBP2O75592 4640 aa5.18□□□□□ -1.58
ATG4A-202ENST00000345734 ADM2Q7Z4H4 148 aa5.18□□□□□ -1.58
ATG4A-202ENST00000345734 RPS29P62273 56 aaKnown RBP5.17□□□□□ -1.58
ATG4A-202ENST00000345734 FLG2Q5D862 2391 aaPredicted RBP5.17□□□□□ -1.58
ATG4A-202ENST00000345734 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.58
ATG4A-202ENST00000345734 Q5W150 140 aa5.15□□□□□ -1.59
ATG4A-202ENST00000345734 KRTAP13-3Q3SY46 172 aa5.12□□□□□ -1.59
ATG4A-202ENST00000345734 SPATA8Q6RVD6 105 aa5.12□□□□□ -1.59
ATG4A-202ENST00000345734 KRTAP10-8P60410 259 aa5.11□□□□□ -1.59
ATG4A-202ENST00000345734 CSAG1Q6PB30 78 aa5.11□□□□□ -1.59
ATG4A-202ENST00000345734 ROMO1P60602 79 aa5.11□□□□□ -1.59
ATG4A-202ENST00000345734 DMBT1Q9UGM3 2413 aaPredicted RBP5.1□□□□□ -1.59
ATG4A-202ENST00000345734 PCOTHQ58A44 107 aa5.1□□□□□ -1.59
ATG4A-202ENST00000345734 C9orf92A6NGG3 77 aa5.08□□□□□ -1.6
ATG4A-202ENST00000345734 HRES1P13985 223 aa5.05□□□□□ -1.6
ATG4A-202ENST00000345734 KRTAP4-2Q9BYR5 136 aa5.05□□□□□ -1.6
ATG4A-202ENST00000345734 MT1HL1P0DM35 61 aa5.03□□□□□ -1.6
ATG4A-202ENST00000345734 ABCA13Q86UQ4 5058 aa5.02□□□□□ -1.61
ATG4A-202ENST00000345734 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
ATG4A-202ENST00000345734 UQCR11O14957 56 aa5.01□□□□□ -1.61
ATG4A-202ENST00000345734 MIR22HGQ0VDD5 57 aa5.01□□□□□ -1.61
ATG4A-202ENST00000345734 BIRC6Q9NR09 4857 aa5□□□□□ -1.61
ATG4A-202ENST00000345734 A8MUU9 505 aa5□□□□□ -1.61
ATG4A-202ENST00000345734 C20orf166-AS1Q96NR2 134 aa5□□□□□ -1.61
ATG4A-202ENST00000345734 HERC2O95714 4834 aa4.98□□□□□ -1.61
ATG4A-202ENST00000345734 A0A1B0GU69 56 aa4.98□□□□□ -1.61
ATG4A-202ENST00000345734 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
ATG4A-202ENST00000345734 ACYP2P14621 99 aa4.95□□□□□ -1.62
ATG4A-202ENST00000345734 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
ATG4A-202ENST00000345734 LPAP08519 4548 aa4.92□□□□□ -1.62
ATG4A-202ENST00000345734 LRP2P98164 4655 aa4.91□□□□□ -1.62
ATG4A-202ENST00000345734 DMAC1Q96GE9 116 aa4.9□□□□□ -1.62
ATG4A-202ENST00000345734 P0C880 135 aa4.88□□□□□ -1.63
ATG4A-202ENST00000345734 RPL37P61927 97 aaKnown RBP4.87□□□□□ -1.63
ATG4A-202ENST00000345734 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
ATG4A-202ENST00000345734 TPRXLQ17RH7 258 aa4.81□□□□□ -1.64
ATG4A-202ENST00000345734 PCLOQ9Y6V0 5065 aa4.77□□□□□ -1.65
ATG4A-202ENST00000345734 HERC1Q15751 4861 aa4.76□□□□□ -1.65
ATG4A-202ENST00000345734 COX6B2Q6YFQ2 88 aa4.75□□□□□ -1.65
ATG4A-202ENST00000345734 MUC17Q685J3 4493 aa4.74□□□□□ -1.65
ATG4A-202ENST00000345734 K7ERS5 55 aa4.72□□□□□ -1.65
ATG4A-202ENST00000345734 HMCN2Q8NDA2 5059 aa4.68□□□□□ -1.66
ATG4A-202ENST00000345734 SPINT4Q6UDR6 99 aa4.68□□□□□ -1.66
ATG4A-202ENST00000345734 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
ATG4A-202ENST00000345734 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
ATG4A-202ENST00000345734 H0YAA0 97 aa4.63□□□□□ -1.67
ATG4A-202ENST00000345734 KRTAP4-1Q9BYQ7 146 aa4.61□□□□□ -1.67
ATG4A-202ENST00000345734 S4R3F8 94 aa4.6□□□□□ -1.67
ATG4A-202ENST00000345734 H1FX-AS1Q4G0G2 97 aa4.6□□□□□ -1.67
ATG4A-202ENST00000345734 MUC2Q02817 5179 aa4.59□□□□□ -1.67
ATG4A-202ENST00000345734 MT3P25713 68 aa4.57□□□□□ -1.68
ATG4A-202ENST00000345734 A0A1B0GU33 70 aa4.54□□□□□ -1.68
ATG4A-202ENST00000345734 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
ATG4A-202ENST00000345734 FLGP20930 4061 aaPredicted RBP4.52□□□□□ -1.69
ATG4A-202ENST00000345734 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
ATG4A-202ENST00000345734 KRTAP19-2Q3LHN2 52 aa4.49□□□□□ -1.69
ATG4A-202ENST00000345734 CRIPTQ9P021 101 aa4.49□□□□□ -1.69
ATG4A-202ENST00000345734 RNF213Q63HN8 5207 aa4.47□□□□□ -1.69
ATG4A-202ENST00000345734 UBR4Q5T4S7 5183 aa4.46□□□□□ -1.7
ATG4A-202ENST00000345734 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
ATG4A-202ENST00000345734 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.7
ATG4A-202ENST00000345734 FAT4Q6V0I7 4981 aa4.4□□□□□ -1.71
ATG4A-202ENST00000345734 CAMK2N1Q7Z7J9 78 aa4.37□□□□□ -1.71
ATG4A-202ENST00000345734 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
ATG4A-202ENST00000345734 A0A0D9SG42 100 aa4.33□□□□□ -1.72
ATG4A-202ENST00000345734 C10orf95Q9H7T3 257 aa4.3□□□□□ -1.72
ATG4A-202ENST00000345734 M0QZ58 72 aa4.27□□□□□ -1.73
ATG4A-202ENST00000345734 R4GN34 69 aa4.24□□□□□ -1.73
ATG4A-202ENST00000345734 KRTAP12-2P59991 146 aa4.23□□□□□ -1.73
ATG4A-202ENST00000345734 MT1HP80294 61 aa4.22□□□□□ -1.73
ATG4A-202ENST00000345734 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
ATG4A-202ENST00000345734 M0R2T5 61 aa4.19□□□□□ -1.74
ATG4A-202ENST00000345734 PLAC4Q8WY50 150 aa4.19□□□□□ -1.74
ATG4A-202ENST00000345734 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
ATG4A-202ENST00000345734 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
ATG4A-202ENST00000345734 PRO2289Q9P1D8 64 aa4.12□□□□□ -1.75
ATG4A-202ENST00000345734 MT2AP02795 61 aa4.09□□□□□ -1.75
ATG4A-202ENST00000345734 MT1FP04733 61 aa4.09□□□□□ -1.76
ATG4A-202ENST00000345734 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
ATG4A-202ENST00000345734 SPRR2GQ9BYE4 73 aa4.04□□□□□ -1.76
ATG4A-202ENST00000345734 PP632Q6XCG6 107 aa3.97□□□□□ -1.77
ATG4A-202ENST00000345734 INE1O15225 51 aa3.96□□□□□ -1.78
ATG4A-202ENST00000345734 KRTAP19-8Q3LI54 63 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms