RNA–Protein interactions for RNA: ENST00000342628.6

FOXM1-201, Transcript of forkhead box M1, humanhuman

TSL 1 (best) BASIC

Gene FOXM1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-201ENST00000342628 MMP24-AS1A0A0U1RRL7 71 aa4.47□□□□□ -1.69
FOXM1-201ENST00000342628 CSAG1Q6PB30 78 aa4.47□□□□□ -1.69
FOXM1-201ENST00000342628 LINC01558Q9Y6Z2 57 aa4.47□□□□□ -1.69
FOXM1-201ENST00000342628 MRPL34Q9BQ48 92 aaKnown RBP4.46□□□□□ -1.7
FOXM1-201ENST00000342628 COA5Q86WW8 74 aa4.46□□□□□ -1.7
FOXM1-201ENST00000342628 SEC61BP60468 96 aaKnown RBP4.45□□□□□ -1.7
FOXM1-201ENST00000342628 KRTAP16-1A8MUX0 517 aa4.44□□□□□ -1.7
FOXM1-201ENST00000342628 ROMO1P60602 79 aa4.44□□□□□ -1.7
FOXM1-201ENST00000342628 RPL37P61927 97 aaKnown RBP4.44□□□□□ -1.7
FOXM1-201ENST00000342628 C20orf166-AS1Q96NR2 134 aa4.44□□□□□ -1.7
FOXM1-201ENST00000342628 LPAP08519 4548 aa4.44□□□□□ -1.7
FOXM1-201ENST00000342628 A8MUU9 505 aa4.43□□□□□ -1.7
FOXM1-201ENST00000342628 LRP2P98164 4655 aa4.42□□□□□ -1.7
FOXM1-201ENST00000342628 H0Y9P7 68 aa4.4□□□□□ -1.71
FOXM1-201ENST00000342628 PCOTHQ58A44 107 aa4.4□□□□□ -1.71
FOXM1-201ENST00000342628 TP53AIP1Q9HCN2 124 aa4.39□□□□□ -1.71
FOXM1-201ENST00000342628 MIR22HGQ0VDD5 57 aa4.38□□□□□ -1.71
FOXM1-201ENST00000342628 H3BPC8 53 aa4.38□□□□□ -1.71
FOXM1-201ENST00000342628 MUC17Q685J3 4493 aa4.33□□□□□ -1.72
FOXM1-201ENST00000342628 Q5W150 140 aa4.31□□□□□ -1.72
FOXM1-201ENST00000342628 IGKV2D-30A0A075B6S6 120 aa4.3□□□□□ -1.72
FOXM1-201ENST00000342628 IGKV2-30P06310 120 aa4.3□□□□□ -1.72
FOXM1-201ENST00000342628 P0C880 135 aa4.28□□□□□ -1.72
FOXM1-201ENST00000342628 SPATA8Q6RVD6 105 aa4.28□□□□□ -1.72
FOXM1-201ENST00000342628 UBR4Q5T4S7 5183 aa4.28□□□□□ -1.72
FOXM1-201ENST00000342628 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
FOXM1-201ENST00000342628 KRTAP4-1Q9BYQ7 146 aa4.25□□□□□ -1.73
FOXM1-201ENST00000342628 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
FOXM1-201ENST00000342628 HRES1P13985 223 aa4.24□□□□□ -1.73
FOXM1-201ENST00000342628 UQCR11O14957 56 aa4.23□□□□□ -1.73
FOXM1-201ENST00000342628 A0A1B0GU69 56 aa4.22□□□□□ -1.73
FOXM1-201ENST00000342628 COX6B2Q6YFQ2 88 aa4.22□□□□□ -1.73
FOXM1-201ENST00000342628 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
FOXM1-201ENST00000342628 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
FOXM1-201ENST00000342628 K7ERS5 55 aa4.17□□□□□ -1.74
FOXM1-201ENST00000342628 MUC2Q02817 5179 aa4.16□□□□□ -1.74
FOXM1-201ENST00000342628 SPINT4Q6UDR6 99 aa4.15□□□□□ -1.75
FOXM1-201ENST00000342628 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
FOXM1-201ENST00000342628 DMAC1Q96GE9 116 aa4.13□□□□□ -1.75
FOXM1-201ENST00000342628 ACYP2P14621 99 aa4.12□□□□□ -1.75
FOXM1-201ENST00000342628 H1FX-AS1Q4G0G2 97 aa4.11□□□□□ -1.75
FOXM1-201ENST00000342628 FAT4Q6V0I7 4981 aa4.09□□□□□ -1.75
FOXM1-201ENST00000342628 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
FOXM1-201ENST00000342628 M0R2T5 61 aa4.08□□□□□ -1.76
FOXM1-201ENST00000342628 KRTAP3-1Q9BYR8 98 aa4.05□□□□□ -1.76
FOXM1-201ENST00000342628 S4R3F8 94 aa4.05□□□□□ -1.76
FOXM1-201ENST00000342628 FLGP20930 4061 aaPredicted RBP4.05□□□□□ -1.76
FOXM1-201ENST00000342628 MT1HP80294 61 aa4.04□□□□□ -1.76
FOXM1-201ENST00000342628 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
FOXM1-201ENST00000342628 KRTAP15-1Q3LI76 137 aa3.99□□□□□ -1.77
FOXM1-201ENST00000342628 KRTAP10-6P60371 365 aaPredicted RBP3.93□□□□□ -1.78
FOXM1-201ENST00000342628 H0YAA0 97 aa3.88□□□□□ -1.79
FOXM1-201ENST00000342628 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
FOXM1-201ENST00000342628 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
FOXM1-201ENST00000342628 MT2AP02795 61 aa3.84□□□□□ -1.8
FOXM1-201ENST00000342628 CAMK2N1Q7Z7J9 78 aa3.83□□□□□ -1.8
FOXM1-201ENST00000342628 A0A1B0GU33 70 aa3.82□□□□□ -1.8
FOXM1-201ENST00000342628 MT1FP04733 61 aa3.8□□□□□ -1.8
FOXM1-201ENST00000342628 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
FOXM1-201ENST00000342628 R4GN34 69 aa3.74□□□□□ -1.81
FOXM1-201ENST00000342628 M0QZ58 72 aa3.72□□□□□ -1.81
FOXM1-201ENST00000342628 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
FOXM1-201ENST00000342628 A0A0D9SG42 100 aa3.69□□□□□ -1.82
FOXM1-201ENST00000342628 SPRR2GQ9BYE4 73 aa3.68□□□□□ -1.82
FOXM1-201ENST00000342628 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
FOXM1-201ENST00000342628 KRTAP19-1Q8IUB9 90 aa3.66□□□□□ -1.82
FOXM1-201ENST00000342628 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
FOXM1-201ENST00000342628 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
FOXM1-201ENST00000342628 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
FOXM1-201ENST00000342628 PLAC4Q8WY50 150 aa3.61□□□□□ -1.83
FOXM1-201ENST00000342628 KRTAP13-4Q3LI77 160 aa3.59□□□□□ -1.83
FOXM1-201ENST00000342628 USH2AO75445 5202 aa3.57□□□□□ -1.84
FOXM1-201ENST00000342628 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
FOXM1-201ENST00000342628 MT1BP07438 61 aa3.56□□□□□ -1.84
FOXM1-201ENST00000342628 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
FOXM1-201ENST00000342628 FSIP2Q5CZC0 6907 aa3.53□□□□□ -1.84
FOXM1-201ENST00000342628 CRCT1Q9UGL9 99 aa3.52□□□□□ -1.85
FOXM1-201ENST00000342628 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
FOXM1-201ENST00000342628 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
FOXM1-201ENST00000342628 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
FOXM1-201ENST00000342628 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
FOXM1-201ENST00000342628 KRTAP9-6A0A140TA67 174 aa3.46□□□□□ -1.86
FOXM1-201ENST00000342628 KRTAP4-8Q9BYQ9 185 aa3.45□□□□□ -1.86
FOXM1-201ENST00000342628 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
FOXM1-201ENST00000342628 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
FOXM1-201ENST00000342628 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
FOXM1-201ENST00000342628 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.86
FOXM1-201ENST00000342628 MT1XP80297 61 aa3.4□□□□□ -1.86
FOXM1-201ENST00000342628 FCGBPQ9Y6R7 5405 aaPredicted RBP3.37□□□□□ -1.87
FOXM1-201ENST00000342628 INE1O15225 51 aa3.35□□□□□ -1.87
FOXM1-201ENST00000342628 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
FOXM1-201ENST00000342628 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.87
FOXM1-201ENST00000342628 TNP1P09430 55 aa3.29□□□□□ -1.88
FOXM1-201ENST00000342628 KRTAP19-4Q3LI73 84 aa3.28□□□□□ -1.88
FOXM1-201ENST00000342628 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
FOXM1-201ENST00000342628 LCE3BQ5TA77 95 aa3.25□□□□□ -1.89
FOXM1-201ENST00000342628 KRTAP10-12P60413 245 aa3.24□□□□□ -1.89
FOXM1-201ENST00000342628 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
FOXM1-201ENST00000342628 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
FOXM1-201ENST00000342628 KRTAP8-1Q8IUC2 63 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms