RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 C7orf65Q6ZTY9 151 aa3.92□□□□□ -1.78
SRFBP1-201ENST00000339397 DMAC1Q96GE9 116 aa3.92□□□□□ -1.78
SRFBP1-201ENST00000339397 CHKB-CPT1BH3BT56 60 aa3.91□□□□□ -1.78
SRFBP1-201ENST00000339397 PRR15LQ9BU68 103 aa3.91□□□□□ -1.78
SRFBP1-201ENST00000339397 ACYP2P14621 99 aa3.9□□□□□ -1.78
SRFBP1-201ENST00000339397 PMAIP1Q13794 54 aa3.9□□□□□ -1.78
SRFBP1-201ENST00000339397 KRTAP3-1Q9BYR8 98 aa3.9□□□□□ -1.79
SRFBP1-201ENST00000339397 HERC1Q15751 4861 aa3.88□□□□□ -1.79
SRFBP1-201ENST00000339397 ATP11AUNQ6ZP68 121 aa3.88□□□□□ -1.79
SRFBP1-201ENST00000339397 RPL37P61927 97 aaKnown RBP3.87□□□□□ -1.79
SRFBP1-201ENST00000339397 RBM12B-AS1Q9P1G2 102 aa3.86□□□□□ -1.79
SRFBP1-201ENST00000339397 A6NED7 52 aa3.86□□□□□ -1.79
SRFBP1-201ENST00000339397 A8MU10 97 aa3.86□□□□□ -1.79
SRFBP1-201ENST00000339397 LINC01558Q9Y6Z2 57 aa3.86□□□□□ -1.79
SRFBP1-201ENST00000339397 MUC2Q02817 5179 aa3.85□□□□□ -1.79
SRFBP1-201ENST00000339397 LCA10Q71F78 164 aa3.84□□□□□ -1.8
SRFBP1-201ENST00000339397 SPTSSBQ8NFR3 76 aa3.83□□□□□ -1.8
SRFBP1-201ENST00000339397 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
SRFBP1-201ENST00000339397 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
SRFBP1-201ENST00000339397 COX6B2Q6YFQ2 88 aa3.79□□□□□ -1.8
SRFBP1-201ENST00000339397 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
SRFBP1-201ENST00000339397 A6NN06 94 aa3.77□□□□□ -1.81
SRFBP1-201ENST00000339397 MUC17Q685J3 4493 aa3.75□□□□□ -1.81
SRFBP1-201ENST00000339397 A0A1B0GU69 56 aa3.74□□□□□ -1.81
SRFBP1-201ENST00000339397 KRTAP4-1Q9BYQ7 146 aa3.74□□□□□ -1.81
SRFBP1-201ENST00000339397 UBR4Q5T4S7 5183 aa3.71□□□□□ -1.81
SRFBP1-201ENST00000339397 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
SRFBP1-201ENST00000339397 S4R3F8 94 aa3.67□□□□□ -1.82
SRFBP1-201ENST00000339397 SPATA8Q6RVD6 105 aa3.66□□□□□ -1.82
SRFBP1-201ENST00000339397 H1FX-AS1Q4G0G2 97 aa3.66□□□□□ -1.82
SRFBP1-201ENST00000339397 RNF213Q63HN8 5207 aa3.65□□□□□ -1.82
SRFBP1-201ENST00000339397 UQCR11O14957 56 aa3.65□□□□□ -1.83
SRFBP1-201ENST00000339397 MIR22HGQ0VDD5 57 aa3.65□□□□□ -1.83
SRFBP1-201ENST00000339397 FAT4Q6V0I7 4981 aa3.63□□□□□ -1.83
SRFBP1-201ENST00000339397 KRTAP10-6P60371 365 aaPredicted RBP3.63□□□□□ -1.83
SRFBP1-201ENST00000339397 ADM2Q7Z4H4 148 aa3.62□□□□□ -1.83
SRFBP1-201ENST00000339397 H0YAA0 97 aa3.62□□□□□ -1.83
SRFBP1-201ENST00000339397 P0C880 135 aa3.61□□□□□ -1.83
SRFBP1-201ENST00000339397 KRTAP19-2Q3LHN2 52 aa3.61□□□□□ -1.83
SRFBP1-201ENST00000339397 A0A1B0GU33 70 aa3.61□□□□□ -1.83
SRFBP1-201ENST00000339397 LOC100996750A0A140TA64 210 aa3.59□□□□□ -1.83
SRFBP1-201ENST00000339397 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.83
SRFBP1-201ENST00000339397 KRTAP13-4Q3LI77 160 aa3.59□□□□□ -1.84
SRFBP1-201ENST00000339397 FLGP20930 4061 aaPredicted RBP3.57□□□□□ -1.84
SRFBP1-201ENST00000339397 CSAG1Q6PB30 78 aa3.57□□□□□ -1.84
SRFBP1-201ENST00000339397 A0A0D9SG42 100 aa3.53□□□□□ -1.84
SRFBP1-201ENST00000339397 LINC01554Q52M75 96 aa3.52□□□□□ -1.85
SRFBP1-201ENST00000339397 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
SRFBP1-201ENST00000339397 KRTAP12-2P59991 146 aa3.43□□□□□ -1.86
SRFBP1-201ENST00000339397 M0QZ58 72 aa3.42□□□□□ -1.86
SRFBP1-201ENST00000339397 K7ERS5 55 aa3.41□□□□□ -1.86
SRFBP1-201ENST00000339397 KRTAP25-1Q3LHN0 102 aa3.41□□□□□ -1.86
SRFBP1-201ENST00000339397 R4GN34 69 aa3.41□□□□□ -1.86
SRFBP1-201ENST00000339397 KRTAP12-1P59990 96 aa3.4□□□□□ -1.86
SRFBP1-201ENST00000339397 SPINT4Q6UDR6 99 aa3.4□□□□□ -1.86
SRFBP1-201ENST00000339397 KRTAP9-2Q9BYQ4 174 aa3.4□□□□□ -1.86
SRFBP1-201ENST00000339397 MT1HP80294 61 aa3.39□□□□□ -1.87
SRFBP1-201ENST00000339397 CRIPTQ9P021 101 aa3.37□□□□□ -1.87
SRFBP1-201ENST00000339397 M0R2T5 61 aa3.37□□□□□ -1.87
SRFBP1-201ENST00000339397 KRTAP9-6A0A140TA67 174 aa3.35□□□□□ -1.87
SRFBP1-201ENST00000339397 ROMO1P60602 79 aa3.33□□□□□ -1.88
SRFBP1-201ENST00000339397 KRTAP4-8Q9BYQ9 185 aa3.32□□□□□ -1.88
SRFBP1-201ENST00000339397 KRTAP15-1Q3LI76 137 aa3.3□□□□□ -1.88
SRFBP1-201ENST00000339397 KRTAP9-8Q9BYQ0 159 aa3.3□□□□□ -1.88
SRFBP1-201ENST00000339397 MT1FP04733 61 aa3.29□□□□□ -1.88
SRFBP1-201ENST00000339397 MT2AP02795 61 aa3.28□□□□□ -1.88
SRFBP1-201ENST00000339397 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
SRFBP1-201ENST00000339397 KRTAP10-10P60014 251 aa3.26□□□□□ -1.89
SRFBP1-201ENST00000339397 KRTAP19-1Q8IUB9 90 aa3.26□□□□□ -1.89
SRFBP1-201ENST00000339397 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
SRFBP1-201ENST00000339397 SPRR2GQ9BYE4 73 aa3.22□□□□□ -1.89
SRFBP1-201ENST00000339397 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
SRFBP1-201ENST00000339397 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
SRFBP1-201ENST00000339397 USH2AO75445 5202 aa3.19□□□□□ -1.9
SRFBP1-201ENST00000339397 FSIP2Q5CZC0 6907 aa3.18□□□□□ -1.9
SRFBP1-201ENST00000339397 CRCT1Q9UGL9 99 aa3.18□□□□□ -1.9
SRFBP1-201ENST00000339397 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
SRFBP1-201ENST00000339397 KRTAP9-3Q9BYQ3 159 aa3.16□□□□□ -1.9
SRFBP1-201ENST00000339397 LCE3BQ5TA77 95 aa3.14□□□□□ -1.91
SRFBP1-201ENST00000339397 MT1BP07438 61 aa3.12□□□□□ -1.91
SRFBP1-201ENST00000339397 PLAC4Q8WY50 150 aa3.12□□□□□ -1.91
SRFBP1-201ENST00000339397 KRTAP19-8Q3LI54 63 aa3.1□□□□□ -1.91
SRFBP1-201ENST00000339397 KRTAP19-4Q3LI73 84 aa3.06□□□□□ -1.92
SRFBP1-201ENST00000339397 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
SRFBP1-201ENST00000339397 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
SRFBP1-201ENST00000339397 MT1XP80297 61 aa3.05□□□□□ -1.92
SRFBP1-201ENST00000339397 KRTAP10-5P60370 271 aa3.05□□□□□ -1.92
SRFBP1-201ENST00000339397 KRTAP4-8A0A0G2JLE6 195 aa3.03□□□□□ -1.92
SRFBP1-201ENST00000339397 TNP1P09430 55 aa3.03□□□□□ -1.92
SRFBP1-201ENST00000339397 KMT2DO14686 5537 aa3.02□□□□□ -1.93
SRFBP1-201ENST00000339397 KRTAP9-7A8MTY7 169 aa2.99□□□□□ -1.93
SRFBP1-201ENST00000339397 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
SRFBP1-201ENST00000339397 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
SRFBP1-201ENST00000339397 LCE1DQ5T752 114 aa2.97□□□□□ -1.93
SRFBP1-201ENST00000339397 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
SRFBP1-201ENST00000339397 LCE5AQ5TCM9 118 aa2.96□□□□□ -1.94
SRFBP1-201ENST00000339397 PP632Q6XCG6 107 aa2.94□□□□□ -1.94
SRFBP1-201ENST00000339397 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
SRFBP1-201ENST00000339397 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
SRFBP1-201ENST00000339397 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms