RNA–Protein interactions for RNA: ENST00000335497.11

RNF220-201, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 1,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-201ENST00000335497 TRAV22A0A0B4J277 110 aa11.25□□□□□ -0.61
RNF220-201ENST00000335497 GTF2H5Q6ZYL4 71 aa11.2□□□□□ -0.62
RNF220-201ENST00000335497 KMT2DO14686 5537 aa11.19□□□□□ -0.62
RNF220-201ENST00000335497 F8W1H4 67 aa11.19□□□□□ -0.62
RNF220-201ENST00000335497 H0YAA0 97 aa11.17□□□□□ -0.62
RNF220-201ENST00000335497 ETDBQ3ZM63 59 aa11.17□□□□□ -0.62
RNF220-201ENST00000335497 NDUFC1O43677 76 aa11.15□□□□□ -0.62
RNF220-201ENST00000335497 MDN1Q9NU22 5596 aa11.12□□□□□ -0.63
RNF220-201ENST00000335497 UQCRQO14949 82 aa11.06□□□□□ -0.64
RNF220-201ENST00000335497 ATOX1O00244 68 aa11.05□□□□□ -0.64
RNF220-201ENST00000335497 H0Y9P7 68 aa11.02□□□□□ -0.65
RNF220-201ENST00000335497 ACYP1P07311 99 aa11.01□□□□□ -0.65
RNF220-201ENST00000335497 A8MUN3 132 aa11□□□□□ -0.65
RNF220-201ENST00000335497 ADM2Q7Z4H4 148 aa11□□□□□ -0.65
RNF220-201ENST00000335497 PRO2289Q9P1D8 64 aa11□□□□□ -0.65
RNF220-201ENST00000335497 ATP5EP2Q5VTU8 51 aa10.98□□□□□ -0.65
RNF220-201ENST00000335497 KRTAP2-3P0C7H8 128 aa10.96□□□□□ -0.65
RNF220-201ENST00000335497 KRTAP2-4Q9BYR9 128 aa10.96□□□□□ -0.65
RNF220-201ENST00000335497 HIST1H4AP62805 103 aaKnown RBP10.95□□□□□ -0.66
RNF220-201ENST00000335497 MT1XP80297 61 aa10.93□□□□□ -0.66
RNF220-201ENST00000335497 SPRR2FQ96RM1 72 aa10.93□□□□□ -0.66
RNF220-201ENST00000335497 FAM240AA0A1B0GVK7 77 aa10.9□□□□□ -0.66
RNF220-201ENST00000335497 PLAC4Q8WY50 150 aa10.87□□□□□ -0.67
RNF220-201ENST00000335497 SPRR2EP22531 72 aa10.86□□□□□ -0.67
RNF220-201ENST00000335497 SPRR2BP35325 72 aa10.86□□□□□ -0.67
RNF220-201ENST00000335497 SPRR2AP35326 72 aa10.86□□□□□ -0.67
RNF220-201ENST00000335497 LINC00208Q96KT6 92 aa10.81□□□□□ -0.68
RNF220-201ENST00000335497 KRTAP8-1Q8IUC2 63 aa10.79□□□□□ -0.68
RNF220-201ENST00000335497 R4GN34 69 aa10.77□□□□□ -0.69
RNF220-201ENST00000335497 KRTAP12-2P59991 146 aa10.76□□□□□ -0.69
RNF220-201ENST00000335497 PCP4L1A6NKN8 68 aa10.73□□□□□ -0.69
RNF220-201ENST00000335497 C20orf197Q8N268 126 aa10.72□□□□□ -0.69
RNF220-201ENST00000335497 MP68P56378 58 aa10.71□□□□□ -0.69
RNF220-201ENST00000335497 P0C880 135 aa10.7□□□□□ -0.7
RNF220-201ENST00000335497 LINC00643Q86TS7 51 aa10.7□□□□□ -0.7
RNF220-201ENST00000335497 LCE1AQ5T7P2 110 aa10.69□□□□□ -0.7
RNF220-201ENST00000335497 OCR1Q9BZK8 76 aa10.67□□□□□ -0.7
RNF220-201ENST00000335497 M0QZ58 72 aa10.65□□□□□ -0.7
RNF220-201ENST00000335497 KRTAP2-2Q9BYT5 123 aa10.59□□□□□ -0.71
RNF220-201ENST00000335497 KRTAP2-1Q9BYU5 128 aa10.59□□□□□ -0.71
RNF220-201ENST00000335497 KRTAP3-2Q9BYR7 98 aa10.56□□□□□ -0.72
RNF220-201ENST00000335497 KRTAP4-8A0A0G2JLE6 195 aa10.55□□□□□ -0.72
RNF220-201ENST00000335497 KRTAP4-8Q9BYQ9 185 aa10.55□□□□□ -0.72
RNF220-201ENST00000335497 DMAC1Q96GE9 116 aa10.54□□□□□ -0.72
RNF220-201ENST00000335497 H3BPC8 53 aa10.53□□□□□ -0.72
RNF220-201ENST00000335497 SPRR2DP22532 72 aa10.51□□□□□ -0.73
RNF220-201ENST00000335497 LINC01554Q52M75 96 aa10.5□□□□□ -0.73
RNF220-201ENST00000335497 KRTAP10-7P60409 375 aaPredicted RBP10.41□□□□□ -0.74
RNF220-201ENST00000335497 KRTAP10-12P60413 245 aa10.39□□□□□ -0.75
RNF220-201ENST00000335497 TRAV7A0A075B6U4 112 aa10.33□□□□□ -0.76
RNF220-201ENST00000335497 SCGB1A1P11684 91 aa10.3□□□□□ -0.76
RNF220-201ENST00000335497 LCE3BQ5TA77 95 aa10.25□□□□□ -0.77
RNF220-201ENST00000335497 MT-ATP8P03928 68 aa10.24□□□□□ -0.77
RNF220-201ENST00000335497 ACYP2P14621 99 aa10.23□□□□□ -0.77
RNF220-201ENST00000335497 SPTSSBQ8NFR3 76 aa10.19□□□□□ -0.78
RNF220-201ENST00000335497 J3QR89 54 aa10.15□□□□□ -0.78
RNF220-201ENST00000335497 A0A1B0GV90 55 aa10.11□□□□□ -0.79
RNF220-201ENST00000335497 CHKB-CPT1BH3BT56 60 aa10.01□□□□□ -0.81
RNF220-201ENST00000335497 SMIM20Q8N5G0 67 aa9.95□□□□□ -0.82
RNF220-201ENST00000335497 KRTAP13-4Q3LI77 160 aa9.84□□□□□ -0.83
RNF220-201ENST00000335497 CAMK2N1Q7Z7J9 78 aa9.84□□□□□ -0.83
RNF220-201ENST00000335497 LCE5AQ5TCM9 118 aa9.79□□□□□ -0.84
RNF220-201ENST00000335497 KRTAP19-7Q3SYF9 63 aa9.77□□□□□ -0.85
RNF220-201ENST00000335497 SNURFQ9Y675 71 aa9.76□□□□□ -0.85
RNF220-201ENST00000335497 SPANXA2-OT1Q8N9U9 137 aa9.74□□□□□ -0.85
RNF220-201ENST00000335497 DSTQ03001 7570 aaKnown RBP9.71□□□□□ -0.85
RNF220-201ENST00000335497 MT1EP04732 61 aa9.71□□□□□ -0.86
RNF220-201ENST00000335497 KRTAP19-3Q7Z4W3 81 aa9.7□□□□□ -0.86
RNF220-201ENST00000335497 GPR98Q8WXG9 6306 aa9.62□□□□□ -0.87
RNF220-201ENST00000335497 KRTAP4-9Q9BYQ8 210 aa9.61□□□□□ -0.87
RNF220-201ENST00000335497 K7ERU9 68 aa9.56□□□□□ -0.88
RNF220-201ENST00000335497 A0A0D9SG42 100 aa9.49□□□□□ -0.89
RNF220-201ENST00000335497 CYSTM1Q9H1C7 97 aa9.49□□□□□ -0.89
RNF220-201ENST00000335497 MT1GP13640 62 aa9.46□□□□□ -0.9
RNF220-201ENST00000335497 SEC61GP60059 68 aa9.46□□□□□ -0.9
RNF220-201ENST00000335497 COA5Q86WW8 74 aa9.46□□□□□ -0.9
RNF220-201ENST00000335497 SERP2Q8N6R1 65 aa9.46□□□□□ -0.9
RNF220-201ENST00000335497 SERP1Q9Y6X1 66 aa9.46□□□□□ -0.9
RNF220-201ENST00000335497 KRTAP19-5Q3LI72 72 aa9.42□□□□□ -0.9
RNF220-201ENST00000335497 SPATA8Q6RVD6 105 aa9.4□□□□□ -0.9
RNF220-201ENST00000335497 SPINT4Q6UDR6 99 aa9.39□□□□□ -0.91
RNF220-201ENST00000335497 PP632Q6XCG6 107 aa9.38□□□□□ -0.91
RNF220-201ENST00000335497 LCE1DQ5T752 114 aa9.36□□□□□ -0.91
RNF220-201ENST00000335497 A0A1B0GU33 70 aa9.33□□□□□ -0.92
RNF220-201ENST00000335497 KRTAP12-1P59990 96 aa9.32□□□□□ -0.92
RNF220-201ENST00000335497 LCE4AQ5TA78 99 aa9.3□□□□□ -0.92
RNF220-201ENST00000335497 MT1MQ8N339 61 aa9.26□□□□□ -0.93
RNF220-201ENST00000335497 MT1LQ93083 61 aa9.21□□□□□ -0.94
RNF220-201ENST00000335497 MT4P47944 62 aa9.19□□□□□ -0.94
RNF220-201ENST00000335497 HMCN1Q96RW7 5635 aa9.19□□□□□ -0.94
RNF220-201ENST00000335497 SMIM26A0A096LP01 95 aa9.09□□□□□ -0.95
RNF220-201ENST00000335497 KRTAP5-4Q6L8H1 288 aa9.06□□□□□ -0.96
RNF220-201ENST00000335497 COX7CP15954 63 aa9.05□□□□□ -0.96
RNF220-201ENST00000335497 C10orf95Q9H7T3 257 aa9.04□□□□□ -0.96
RNF220-201ENST00000335497 LCE3AQ5TA76 89 aa9.03□□□□□ -0.96
RNF220-201ENST00000335497 KRTAP4-3Q9BYR4 195 aa9.02□□□□□ -0.97
RNF220-201ENST00000335497 H7BZZ5 65 aa9.01□□□□□ -0.97
RNF220-201ENST00000335497 A0A1B0GU69 56 aa8.99□□□□□ -0.97
RNF220-201ENST00000335497 TNP1P09430 55 aa8.99□□□□□ -0.97
RNF220-201ENST00000335497 A8MU10 97 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms