RNA–Protein interactions for RNA: ENST00000332245.9

KLHDC3-203, Transcript of kelch domain containing 3, humanhuman

TSL 2 BASIC

Gene KLHDC3, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-203ENST00000332245 MT2AP02795 61 aa7.33□□□□□ -1.24
KLHDC3-203ENST00000332245 COX7CP15954 63 aa7.33□□□□□ -1.24
KLHDC3-203ENST00000332245 A8MUN3 132 aa7.3□□□□□ -1.24
KLHDC3-203ENST00000332245 S4R3F8 94 aa7.3□□□□□ -1.24
KLHDC3-203ENST00000332245 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
KLHDC3-203ENST00000332245 MT1FP04733 61 aa7.29□□□□□ -1.24
KLHDC3-203ENST00000332245 LCA10Q71F78 164 aa7.29□□□□□ -1.24
KLHDC3-203ENST00000332245 KRTAP3-3Q9BYR6 98 aa7.28□□□□□ -1.24
KLHDC3-203ENST00000332245 CCDC179H3BU77 68 aa7.27□□□□□ -1.25
KLHDC3-203ENST00000332245 LCE2BO14633 110 aa7.24□□□□□ -1.25
KLHDC3-203ENST00000332245 KRTAP9-3Q9BYQ3 159 aa7.24□□□□□ -1.25
KLHDC3-203ENST00000332245 CSAG1Q6PB30 78 aa7.24□□□□□ -1.25
KLHDC3-203ENST00000332245 SNURFQ9Y675 71 aa7.23□□□□□ -1.25
KLHDC3-203ENST00000332245 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
KLHDC3-203ENST00000332245 KRTAP10-10P60014 251 aa7.21□□□□□ -1.26
KLHDC3-203ENST00000332245 C20orf197Q8N268 126 aa7.2□□□□□ -1.26
KLHDC3-203ENST00000332245 DMAC1Q96GE9 116 aa7.19□□□□□ -1.26
KLHDC3-203ENST00000332245 NDUFC1O43677 76 aa7.15□□□□□ -1.27
KLHDC3-203ENST00000332245 CYSTM1Q9H1C7 97 aa7.11□□□□□ -1.27
KLHDC3-203ENST00000332245 SPANXA2-OT1Q8N9U9 137 aa7.1□□□□□ -1.27
KLHDC3-203ENST00000332245 MACF1Q9UPN3 7388 aaKnown RBP7.1□□□□□ -1.27
KLHDC3-203ENST00000332245 SYNE2Q8WXH0 6885 aaKnown RBP7.09□□□□□ -1.27
KLHDC3-203ENST00000332245 ACYP2P14621 99 aa7.08□□□□□ -1.28
KLHDC3-203ENST00000332245 KRTAP19-6Q3LI70 58 aa7.07□□□□□ -1.28
KLHDC3-203ENST00000332245 H0YAA0 97 aa7.05□□□□□ -1.28
KLHDC3-203ENST00000332245 H7BZZ5 65 aa7.05□□□□□ -1.28
KLHDC3-203ENST00000332245 TMEM258P61165 79 aa7.04□□□□□ -1.28
KLHDC3-203ENST00000332245 ATP5EP56381 51 aaPredicted RBP6.97□□□□□ -1.29
KLHDC3-203ENST00000332245 CRIPTQ9P021 101 aa6.94□□□□□ -1.3
KLHDC3-203ENST00000332245 SPTSSBQ8NFR3 76 aa6.93□□□□□ -1.3
KLHDC3-203ENST00000332245 ADM2Q7Z4H4 148 aa6.92□□□□□ -1.3
KLHDC3-203ENST00000332245 SPRR2GQ9BYE4 73 aa6.92□□□□□ -1.3
KLHDC3-203ENST00000332245 KRTAP6-3Q3LI67 103 aa6.91□□□□□ -1.3
KLHDC3-203ENST00000332245 CHKB-CPT1BH3BT56 60 aa6.9□□□□□ -1.31
KLHDC3-203ENST00000332245 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
KLHDC3-203ENST00000332245 P0C880 135 aa6.85□□□□□ -1.31
KLHDC3-203ENST00000332245 COA5Q86WW8 74 aa6.84□□□□□ -1.31
KLHDC3-203ENST00000332245 KRTAP19-8Q3LI54 63 aa6.81□□□□□ -1.32
KLHDC3-203ENST00000332245 SERP1Q9Y6X1 66 aa6.81□□□□□ -1.32
KLHDC3-203ENST00000332245 MT1BP07438 61 aa6.79□□□□□ -1.32
KLHDC3-203ENST00000332245 RPS28P62857 69 aaKnown RBP6.79□□□□□ -1.32
KLHDC3-203ENST00000332245 Q5VV11 94 aa6.75□□□□□ -1.33
KLHDC3-203ENST00000332245 R4GN34 69 aa6.71□□□□□ -1.34
KLHDC3-203ENST00000332245 NEBP20929 6669 aa6.7□□□□□ -1.34
KLHDC3-203ENST00000332245 M0QZ58 72 aa6.66□□□□□ -1.34
KLHDC3-203ENST00000332245 SMIM26A0A096LP01 95 aa6.63□□□□□ -1.35
KLHDC3-203ENST00000332245 A6NN06 94 aa6.61□□□□□ -1.35
KLHDC3-203ENST00000332245 SEC61GP60059 68 aa6.6□□□□□ -1.35
KLHDC3-203ENST00000332245 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
KLHDC3-203ENST00000332245 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
KLHDC3-203ENST00000332245 KRTAP10-5P60370 271 aa6.53□□□□□ -1.36
KLHDC3-203ENST00000332245 LINC01554Q52M75 96 aa6.53□□□□□ -1.36
KLHDC3-203ENST00000332245 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
KLHDC3-203ENST00000332245 V9GYY9 64 aa6.51□□□□□ -1.37
KLHDC3-203ENST00000332245 Q1T7F1 81 aa6.5□□□□□ -1.37
KLHDC3-203ENST00000332245 KRTAP5-9P26371 169 aa6.48□□□□□ -1.37
KLHDC3-203ENST00000332245 KRTAP20-1Q3LI63 56 aa6.47□□□□□ -1.37
KLHDC3-203ENST00000332245 A0A1B0GU69 56 aa6.47□□□□□ -1.37
KLHDC3-203ENST00000332245 A0A1B0GU33 70 aa6.46□□□□□ -1.38
KLHDC3-203ENST00000332245 MT1XP80297 61 aa6.44□□□□□ -1.38
KLHDC3-203ENST00000332245 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
KLHDC3-203ENST00000332245 SPATA8Q6RVD6 105 aa6.41□□□□□ -1.38
KLHDC3-203ENST00000332245 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
KLHDC3-203ENST00000332245 KMT2DO14686 5537 aa6.4□□□□□ -1.38
KLHDC3-203ENST00000332245 PRR15LQ9BU68 103 aa6.39□□□□□ -1.39
KLHDC3-203ENST00000332245 PSPHP1O15172 72 aa6.36□□□□□ -1.39
KLHDC3-203ENST00000332245 MDN1Q9NU22 5596 aa6.36□□□□□ -1.39
KLHDC3-203ENST00000332245 A0A0D9SG42 100 aa6.33□□□□□ -1.4
KLHDC3-203ENST00000332245 KRTAP2-3P0C7H8 128 aa6.28□□□□□ -1.4
KLHDC3-203ENST00000332245 KRTAP2-4Q9BYR9 128 aa6.28□□□□□ -1.4
KLHDC3-203ENST00000332245 A8MU10 97 aa6.26□□□□□ -1.41
KLHDC3-203ENST00000332245 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
KLHDC3-203ENST00000332245 KRTAP12-2P59991 146 aa6.22□□□□□ -1.41
KLHDC3-203ENST00000332245 CAMK2N1Q7Z7J9 78 aa6.21□□□□□ -1.42
KLHDC3-203ENST00000332245 A6NED7 52 aa6.2□□□□□ -1.42
KLHDC3-203ENST00000332245 UQCR11O14957 56 aa6.2□□□□□ -1.42
KLHDC3-203ENST00000332245 SPINT4Q6UDR6 99 aa6.19□□□□□ -1.42
KLHDC3-203ENST00000332245 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
KLHDC3-203ENST00000332245 SPRR2FQ96RM1 72 aa6.16□□□□□ -1.42
KLHDC3-203ENST00000332245 BRK1Q8WUW1 75 aa6.14□□□□□ -1.43
KLHDC3-203ENST00000332245 SPRR2EP22531 72 aa6.13□□□□□ -1.43
KLHDC3-203ENST00000332245 SPRR2BP35325 72 aa6.13□□□□□ -1.43
KLHDC3-203ENST00000332245 SPRR2AP35326 72 aa6.13□□□□□ -1.43
KLHDC3-203ENST00000332245 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
KLHDC3-203ENST00000332245 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
KLHDC3-203ENST00000332245 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.44
KLHDC3-203ENST00000332245 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
KLHDC3-203ENST00000332245 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
KLHDC3-203ENST00000332245 KRTAP2-2Q9BYT5 123 aa6.07□□□□□ -1.44
KLHDC3-203ENST00000332245 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
KLHDC3-203ENST00000332245 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
KLHDC3-203ENST00000332245 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
KLHDC3-203ENST00000332245 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
KLHDC3-203ENST00000332245 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.45
KLHDC3-203ENST00000332245 SPRR2DP22532 72 aa5.94□□□□□ -1.46
KLHDC3-203ENST00000332245 K7ERS5 55 aa5.89□□□□□ -1.47
KLHDC3-203ENST00000332245 TNP1P09430 55 aa5.84□□□□□ -1.47
KLHDC3-203ENST00000332245 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
KLHDC3-203ENST00000332245 PMAIP1Q13794 54 aa5.79□□□□□ -1.48
KLHDC3-203ENST00000332245 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms