RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
SMG1-201ENST00000330588 SPTSSBQ8NFR3 76 aa3.4□□□□□ -1.87
SMG1-201ENST00000330588 RNF213Q63HN8 5207 aa3.4□□□□□ -1.87
SMG1-201ENST00000330588 TRBV7-4A0A0J9YYF1 115 aa3.39□□□□□ -1.87
SMG1-201ENST00000330588 C9orf92A6NGG3 77 aa3.39□□□□□ -1.87
SMG1-201ENST00000330588 PCOTHQ58A44 107 aa3.39□□□□□ -1.87
SMG1-201ENST00000330588 A0A0G2JQZ4 141 aa3.38□□□□□ -1.87
SMG1-201ENST00000330588 LOC101927531A0A1B0GV80 90 aa3.38□□□□□ -1.87
SMG1-201ENST00000330588 KRTAP19-2Q3LHN2 52 aa3.38□□□□□ -1.87
SMG1-201ENST00000330588 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
SMG1-201ENST00000330588 A0A087WVE0 104 aa3.37□□□□□ -1.87
SMG1-201ENST00000330588 CHKB-CPT1BH3BT56 60 aa3.36□□□□□ -1.87
SMG1-201ENST00000330588 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
SMG1-201ENST00000330588 DNAL4O96015 105 aa3.35□□□□□ -1.87
SMG1-201ENST00000330588 ROMO1P60602 79 aa3.35□□□□□ -1.87
SMG1-201ENST00000330588 CASC2Q6XLA1 102 aa3.35□□□□□ -1.87
SMG1-201ENST00000330588 OBSCN-AS1Q96MR7 158 aa3.35□□□□□ -1.87
SMG1-201ENST00000330588 ORMDL1Q9P0S3 153 aa3.35□□□□□ -1.87
SMG1-201ENST00000330588 IGKV3D-7A0A0C4DH55 119 aa3.34□□□□□ -1.87
SMG1-201ENST00000330588 TMEM254Q8TBM7 123 aa3.34□□□□□ -1.87
SMG1-201ENST00000330588 SNURFQ9Y675 71 aa3.34□□□□□ -1.87
SMG1-201ENST00000330588 A8MU10 97 aa3.34□□□□□ -1.88
SMG1-201ENST00000330588 Q96NJ1 140 aa3.34□□□□□ -1.88
SMG1-201ENST00000330588 C20orf166-AS1Q96NR2 134 aa3.34□□□□□ -1.88
SMG1-201ENST00000330588 A0A087WSZ3 146 aa3.33□□□□□ -1.88
SMG1-201ENST00000330588 MT1HP80294 61 aa3.33□□□□□ -1.88
SMG1-201ENST00000330588 MUC2Q02817 5179 aa3.33□□□□□ -1.88
SMG1-201ENST00000330588 A0A1W2PNM2 257 aa3.32□□□□□ -1.88
SMG1-201ENST00000330588 A8MUU9 505 aa3.32□□□□□ -1.88
SMG1-201ENST00000330588 LINC00846Q9NV44 126 aa3.32□□□□□ -1.88
SMG1-201ENST00000330588 C1orf64Q8NEQ6 169 aa3.31□□□□□ -1.88
SMG1-201ENST00000330588 C8orf17Q9NRJ1 99 aa3.31□□□□□ -1.88
SMG1-201ENST00000330588 A6NED7 52 aa3.3□□□□□ -1.88
SMG1-201ENST00000330588 BAALC-AS2P0C853 105 aa3.3□□□□□ -1.88
SMG1-201ENST00000330588 OCR1Q9BZK8 76 aa3.29□□□□□ -1.88
SMG1-201ENST00000330588 K7ERS5 55 aa3.29□□□□□ -1.88
SMG1-201ENST00000330588 ADM2Q7Z4H4 148 aa3.29□□□□□ -1.88
SMG1-201ENST00000330588 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
SMG1-201ENST00000330588 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
SMG1-201ENST00000330588 COX6B2Q6YFQ2 88 aa3.28□□□□□ -1.88
SMG1-201ENST00000330588 LINC00472Q9H8W2 130 aa3.28□□□□□ -1.88
SMG1-201ENST00000330588 NREPQ16612 68 aa3.27□□□□□ -1.89
SMG1-201ENST00000330588 A8MWP4 228 aa3.26□□□□□ -1.89
SMG1-201ENST00000330588 IGKV4-1P06312 121 aa3.26□□□□□ -1.89
SMG1-201ENST00000330588 PDE6GP18545 87 aa3.26□□□□□ -1.89
SMG1-201ENST00000330588 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
SMG1-201ENST00000330588 UBL5Q9BZL1 73 aa3.26□□□□□ -1.89
SMG1-201ENST00000330588 JMJD7-PLA2G4BH0Y9G9 81 aa3.25□□□□□ -1.89
SMG1-201ENST00000330588 Q6ZQT0 140 aa3.25□□□□□ -1.89
SMG1-201ENST00000330588 C14orf132Q9NPU4 83 aa3.25□□□□□ -1.89
SMG1-201ENST00000330588 PRR15LQ9BU68 103 aa3.25□□□□□ -1.89
SMG1-201ENST00000330588 LOC110117498A0A087WWA1 95 aa3.24□□□□□ -1.89
SMG1-201ENST00000330588 DSCR10P59022 87 aa3.24□□□□□ -1.89
SMG1-201ENST00000330588 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
SMG1-201ENST00000330588 A0A1B0GVX0 72 aa3.23□□□□□ -1.89
SMG1-201ENST00000330588 M0R2T5 61 aa3.23□□□□□ -1.89
SMG1-201ENST00000330588 NDUFB1O75438 58 aa3.23□□□□□ -1.89
SMG1-201ENST00000330588 BPY2O14599 106 aa3.22□□□□□ -1.89
SMG1-201ENST00000330588 MIR22HGQ0VDD5 57 aa3.22□□□□□ -1.89
SMG1-201ENST00000330588 CAMK2N1Q7Z7J9 78 aa3.22□□□□□ -1.89
SMG1-201ENST00000330588 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.89
SMG1-201ENST00000330588 ZCCHC13Q8WW36 166 aaKnown RBP3.21□□□□□ -1.89
SMG1-201ENST00000330588 LINC01558Q9Y6Z2 57 aa3.21□□□□□ -1.89
SMG1-201ENST00000330588 SPANXA2-OT1Q8N9U9 137 aa3.21□□□□□ -1.9
SMG1-201ENST00000330588 CRCT1Q9UGL9 99 aa3.21□□□□□ -1.9
SMG1-201ENST00000330588 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
SMG1-201ENST00000330588 P0C880 135 aa3.19□□□□□ -1.9
SMG1-201ENST00000330588 HRES1P13985 223 aa3.19□□□□□ -1.9
SMG1-201ENST00000330588 DEFB116Q30KQ4 102 aa3.19□□□□□ -1.9
SMG1-201ENST00000330588 CSAG1Q6PB30 78 aa3.19□□□□□ -1.9
SMG1-201ENST00000330588 LINC00208Q96KT6 92 aa3.17□□□□□ -1.9
SMG1-201ENST00000330588 H3BPC8 53 aa3.16□□□□□ -1.9
SMG1-201ENST00000330588 SPINK7P58062 85 aa3.13□□□□□ -1.91
SMG1-201ENST00000330588 MMP24-AS1A0A0U1RRL7 71 aa3.12□□□□□ -1.91
SMG1-201ENST00000330588 KRTAP25-1Q3LHN0 102 aa3.12□□□□□ -1.91
SMG1-201ENST00000330588 MRPL34Q9BQ48 92 aaKnown RBP3.12□□□□□ -1.91
SMG1-201ENST00000330588 FLGP20930 4061 aaPredicted RBP3.12□□□□□ -1.91
SMG1-201ENST00000330588 WFDC13Q8IUB5 93 aa3.12□□□□□ -1.91
SMG1-201ENST00000330588 DMAC1Q96GE9 116 aa3.12□□□□□ -1.91
SMG1-201ENST00000330588 H0Y9P7 68 aa3.1□□□□□ -1.91
SMG1-201ENST00000330588 MT2AP02795 61 aa3.1□□□□□ -1.91
SMG1-201ENST00000330588 SPATA8Q6RVD6 105 aa3.09□□□□□ -1.91
SMG1-201ENST00000330588 K7EQZ3 153 aa3.08□□□□□ -1.92
SMG1-201ENST00000330588 MT1FP04733 61 aa3.07□□□□□ -1.92
SMG1-201ENST00000330588 UQCR11O14957 56 aa3.06□□□□□ -1.92
SMG1-201ENST00000330588 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
SMG1-201ENST00000330588 KRTAP10-10P60014 251 aa3.05□□□□□ -1.92
SMG1-201ENST00000330588 H1FX-AS1Q4G0G2 97 aa3.05□□□□□ -1.92
SMG1-201ENST00000330588 Q5W150 140 aa3.05□□□□□ -1.92
SMG1-201ENST00000330588 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
SMG1-201ENST00000330588 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
SMG1-201ENST00000330588 COA5Q86WW8 74 aa3.04□□□□□ -1.92
SMG1-201ENST00000330588 FSIP2Q5CZC0 6907 aa3.02□□□□□ -1.93
SMG1-201ENST00000330588 TP53AIP1Q9HCN2 124 aa3.01□□□□□ -1.93
SMG1-201ENST00000330588 Q8N9L7 120 aa3□□□□□ -1.93
SMG1-201ENST00000330588 A0A1B0GU33 70 aa3□□□□□ -1.93
SMG1-201ENST00000330588 KRTAP19-6Q3LI70 58 aa2.97□□□□□ -1.93
SMG1-201ENST00000330588 S4R3F8 94 aa2.93□□□□□ -1.94
SMG1-201ENST00000330588 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
SMG1-201ENST00000330588 A0A1B0GU69 56 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms