RNA–Protein interactions for RNA: ENST00000324941.4

VPS37D-201, Transcript of VPS37D, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37D, Length 1,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37D-201ENST00000324941 LCA10Q71F78 164 aa13.86□□□□□ -0.19
VPS37D-201ENST00000324941 LINC01558Q9Y6Z2 57 aa13.83□□□□□ -0.2
VPS37D-201ENST00000324941 KRTAP3-3Q9BYR6 98 aa13.78□□□□□ -0.2
VPS37D-201ENST00000324941 KRTAP19-2Q3LHN2 52 aa13.75□□□□□ -0.21
VPS37D-201ENST00000324941 PRR15LQ9BU68 103 aa13.71□□□□□ -0.22
VPS37D-201ENST00000324941 PSPHP1O15172 72 aa13.7□□□□□ -0.22
VPS37D-201ENST00000324941 A0A1B0GU69 56 aa13.65□□□□□ -0.22
VPS37D-201ENST00000324941 CSAG1Q6PB30 78 aa13.64□□□□□ -0.23
VPS37D-201ENST00000324941 SEC61GP60059 68 aa13.62□□□□□ -0.23
VPS37D-201ENST00000324941 Q5VV11 94 aa13.56□□□□□ -0.24
VPS37D-201ENST00000324941 MUC2Q02817 5179 aa13.55□□□□□ -0.24
VPS37D-201ENST00000324941 UBR4Q5T4S7 5183 aa13.47□□□□□ -0.25
VPS37D-201ENST00000324941 LCE2CQ5TA81 110 aa13.46□□□□□ -0.26
VPS37D-201ENST00000324941 RNF213Q63HN8 5207 aa13.4□□□□□ -0.26
VPS37D-201ENST00000324941 A6NED7 52 aa13.31□□□□□ -0.28
VPS37D-201ENST00000324941 H0YAA0 97 aa13.3□□□□□ -0.28
VPS37D-201ENST00000324941 ADM2Q7Z4H4 148 aa13.3□□□□□ -0.28
VPS37D-201ENST00000324941 KRTAP3-2Q9BYR7 98 aa13.29□□□□□ -0.28
VPS37D-201ENST00000324941 KRTAP10-6P60371 365 aaPredicted RBP13.27□□□□□ -0.29
VPS37D-201ENST00000324941 FLGP20930 4061 aaPredicted RBP13.27□□□□□ -0.29
VPS37D-201ENST00000324941 A0A1B0GU33 70 aa13.24□□□□□ -0.29
VPS37D-201ENST00000324941 UQCR11O14957 56 aa13.24□□□□□ -0.29
VPS37D-201ENST00000324941 MT1HP80294 61 aa13.21□□□□□ -0.29
VPS37D-201ENST00000324941 P0C880 135 aa13.18□□□□□ -0.3
VPS37D-201ENST00000324941 M0R2T5 61 aa13.17□□□□□ -0.3
VPS37D-201ENST00000324941 BRK1Q8WUW1 75 aa13.14□□□□□ -0.31
VPS37D-201ENST00000324941 MIR22HGQ0VDD5 57 aa13.08□□□□□ -0.32
VPS37D-201ENST00000324941 CDC42SE1Q9NRR8 79 aa13.05□□□□□ -0.32
VPS37D-201ENST00000324941 SPATA8Q6RVD6 105 aa13.04□□□□□ -0.32
VPS37D-201ENST00000324941 FAT4Q6V0I7 4981 aa13.02□□□□□ -0.33
VPS37D-201ENST00000324941 A8MU10 97 aa12.91□□□□□ -0.34
VPS37D-201ENST00000324941 M0QZ58 72 aa12.91□□□□□ -0.34
VPS37D-201ENST00000324941 KRTAP13-4Q3LI77 160 aa12.89□□□□□ -0.35
VPS37D-201ENST00000324941 R4GN34 69 aa12.84□□□□□ -0.35
VPS37D-201ENST00000324941 PRO0628Q9UI54 55 aa12.83□□□□□ -0.36
VPS37D-201ENST00000324941 LORP23490 312 aaPredicted RBP12.82□□□□□ -0.36
VPS37D-201ENST00000324941 CRIPTQ9P021 101 aa12.76□□□□□ -0.37
VPS37D-201ENST00000324941 KRTAP9-8Q9BYQ0 159 aa12.72□□□□□ -0.37
VPS37D-201ENST00000324941 A0A0D9SG42 100 aa12.71□□□□□ -0.37
VPS37D-201ENST00000324941 MT2AP02795 61 aa12.68□□□□□ -0.38
VPS37D-201ENST00000324941 LCE2AQ5TA79 106 aaPredicted RBP12.68□□□□□ -0.38
VPS37D-201ENST00000324941 KRTAP10-10P60014 251 aa12.64□□□□□ -0.39
VPS37D-201ENST00000324941 MT1FP04733 61 aa12.6□□□□□ -0.39
VPS37D-201ENST00000324941 LINC01554Q52M75 96 aa12.6□□□□□ -0.39
VPS37D-201ENST00000324941 K7ERS5 55 aa12.55□□□□□ -0.4
VPS37D-201ENST00000324941 PMAIP1Q13794 54 aa12.44□□□□□ -0.42
VPS37D-201ENST00000324941 SPINT4Q6UDR6 99 aa12.44□□□□□ -0.42
VPS37D-201ENST00000324941 SPRR2GQ9BYE4 73 aa12.44□□□□□ -0.42
VPS37D-201ENST00000324941 KRTAP12-1P59990 96 aa12.43□□□□□ -0.42
VPS37D-201ENST00000324941 KRTAP12-2P59991 146 aa12.39□□□□□ -0.43
VPS37D-201ENST00000324941 KRTAP19-1Q8IUB9 90 aa12.37□□□□□ -0.43
VPS37D-201ENST00000324941 A6NN06 94 aa12.36□□□□□ -0.43
VPS37D-201ENST00000324941 KRTAP9-3Q9BYQ3 159 aa12.26□□□□□ -0.45
VPS37D-201ENST00000324941 SVIPQ8NHG7 77 aa12.21□□□□□ -0.46
VPS37D-201ENST00000324941 KRTAP19-8Q3LI54 63 aa12.11□□□□□ -0.47
VPS37D-201ENST00000324941 PLAC4Q8WY50 150 aa12.11□□□□□ -0.47
VPS37D-201ENST00000324941 CAMK2N1Q7Z7J9 78 aa12.05□□□□□ -0.48
VPS37D-201ENST00000324941 ROMO1P60602 79 aa11.97□□□□□ -0.49
VPS37D-201ENST00000324941 MT1BP07438 61 aa11.93□□□□□ -0.5
VPS37D-201ENST00000324941 LCE2BO14633 110 aa11.9□□□□□ -0.5
VPS37D-201ENST00000324941 KTN1-AS1Q86SY8 53 aa11.88□□□□□ -0.51
VPS37D-201ENST00000324941 C10orf95Q9H7T3 257 aa11.76□□□□□ -0.53
VPS37D-201ENST00000324941 PRAC1Q96KF2 57 aa11.6□□□□□ -0.55
VPS37D-201ENST00000324941 LCE2DQ5TA82 110 aaPredicted RBP11.56□□□□□ -0.56
VPS37D-201ENST00000324941 MT1XP80297 61 aa11.54□□□□□ -0.56
VPS37D-201ENST00000324941 KRTAP10-5P60370 271 aa11.53□□□□□ -0.56
VPS37D-201ENST00000324941 PRO2289Q9P1D8 64 aa11.51□□□□□ -0.57
VPS37D-201ENST00000324941 KRTAP25-1Q3LHN0 102 aa11.49□□□□□ -0.57
VPS37D-201ENST00000324941 TNP1P09430 55 aa11.46□□□□□ -0.57
VPS37D-201ENST00000324941 USH2AO75445 5202 aa11.38□□□□□ -0.59
VPS37D-201ENST00000324941 KRTAP19-6Q3LI70 58 aa11.2□□□□□ -0.62
VPS37D-201ENST00000324941 PP632Q6XCG6 107 aa11.12□□□□□ -0.63
VPS37D-201ENST00000324941 KRTAP23-1A1A580 65 aa11.09□□□□□ -0.63
VPS37D-201ENST00000324941 KRTAP9-2Q9BYQ4 174 aa11.09□□□□□ -0.63
VPS37D-201ENST00000324941 KRTAP10-7P60409 375 aaPredicted RBP11.08□□□□□ -0.64
VPS37D-201ENST00000324941 SSPOA2VEC9 5147 aa11.04□□□□□ -0.64
VPS37D-201ENST00000324941 KRTAP10-12P60413 245 aa10.98□□□□□ -0.65
VPS37D-201ENST00000324941 LCE3AQ5TA76 89 aa10.92□□□□□ -0.66
VPS37D-201ENST00000324941 FSIP2Q5CZC0 6907 aa10.89□□□□□ -0.67
VPS37D-201ENST00000324941 CRCT1Q9UGL9 99 aa10.71□□□□□ -0.69
VPS37D-201ENST00000324941 KRTAP8-1Q8IUC2 63 aa10.7□□□□□ -0.7
VPS37D-201ENST00000324941 KRTAP4-8A0A0G2JLE6 195 aa10.65□□□□□ -0.7
VPS37D-201ENST00000324941 KRTAP4-8Q9BYQ9 185 aa10.65□□□□□ -0.7
VPS37D-201ENST00000324941 FCGBPQ9Y6R7 5405 aaPredicted RBP10.57□□□□□ -0.72
VPS37D-201ENST00000324941 KRTAP12-3P60328 96 aa10.51□□□□□ -0.73
VPS37D-201ENST00000324941 KRTAP19-5Q3LI72 72 aa10.45□□□□□ -0.74
VPS37D-201ENST00000324941 KMT2DO14686 5537 aa10.37□□□□□ -0.75
VPS37D-201ENST00000324941 KRTAP15-1Q3LI76 137 aa10.3□□□□□ -0.76
VPS37D-201ENST00000324941 KRTAP19-7Q3SYF9 63 aa10.29□□□□□ -0.76
VPS37D-201ENST00000324941 KRTAP9-6A0A140TA67 174 aa10.22□□□□□ -0.77
VPS37D-201ENST00000324941 MT1EP04732 61 aa10.12□□□□□ -0.79
VPS37D-201ENST00000324941 MACF1Q9UPN3 7388 aaKnown RBP10.03□□□□□ -0.8
VPS37D-201ENST00000324941 SPRR2FQ96RM1 72 aa9.96□□□□□ -0.81
VPS37D-201ENST00000324941 MT1LQ93083 61 aa9.93□□□□□ -0.82
VPS37D-201ENST00000324941 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.89□□□□□ -0.83
VPS37D-201ENST00000324941 KRTAP19-4Q3LI73 84 aa9.89□□□□□ -0.83
VPS37D-201ENST00000324941 KRTAP5-9P26371 169 aa9.83□□□□□ -0.84
VPS37D-201ENST00000324941 LCE3CQ5T5A8 94 aa9.82□□□□□ -0.84
VPS37D-201ENST00000324941 SPRR5A0A1B0GTR4 108 aa9.78□□□□□ -0.84
VPS37D-201ENST00000324941 KRTAP19-3Q7Z4W3 81 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms