RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 Q6ZQT0 140 aa1.08□□□□□ -2.24
HIF1A-201ENST00000323441 MMP24-AS1A0A0U1RRL7 71 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 HIST1H2BKO60814 126 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 HIST1H2BJP06899 126 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 HIST1H2BOP23527 126 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 HIST1H2BBP33778 126 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 HIST1H2BDP58876 126 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 HIST1H2BCP62807 126 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 HIST2H2BEQ16778 126 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 C4orf26Q17RF5 130 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-201ENST00000323441 HIST1H2BHQ93079 126 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 HIST1H2BNQ99877 126 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 HIST1H2BMQ99879 126 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 PAM16Q9Y3D7 125 aa1.07□□□□□ -2.24
HIF1A-201ENST00000323441 DNAL4O96015 105 aa1.06□□□□□ -2.24
HIF1A-201ENST00000323441 KRTDAPP60985 99 aa1.06□□□□□ -2.24
HIF1A-201ENST00000323441 RPS28P62857 69 aaKnown RBP1.06□□□□□ -2.24
HIF1A-201ENST00000323441 PLAC4Q8WY50 150 aa1.06□□□□□ -2.24
HIF1A-201ENST00000323441 HIST1H4GQ99525 98 aa1.06□□□□□ -2.24
HIF1A-201ENST00000323441 hDV103S1A0JD37 113 aa1.06□□□□□ -2.24
HIF1A-201ENST00000323441 Q5W150 140 aa1.06□□□□□ -2.24
HIF1A-201ENST00000323441 KRTAP5-1Q6L8H4 278 aa1.06□□□□□ -2.24
HIF1A-201ENST00000323441 A8MUN3 132 aa1.05□□□□□ -2.24
HIF1A-201ENST00000323441 HIST3H2BBQ8N257 126 aa1.05□□□□□ -2.24
HIF1A-201ENST00000323441 ATOH7Q8N100 152 aa1.05□□□□□ -2.24
HIF1A-201ENST00000323441 HIGD1BQ9P298 99 aa1.05□□□□□ -2.24
HIF1A-201ENST00000323441 C9JAW5 83 aa1.04□□□□□ -2.24
HIF1A-201ENST00000323441 SEC61GP60059 68 aa1.04□□□□□ -2.24
HIF1A-201ENST00000323441 C1orf64Q8NEQ6 169 aa1.04□□□□□ -2.24
HIF1A-201ENST00000323441 PRO1854Q9UHT4 67 aa1.04□□□□□ -2.24
HIF1A-201ENST00000323441 CXCL6P80162 114 aa1.04□□□□□ -2.24
HIF1A-201ENST00000323441 LOC110117498A0A087WWA1 95 aa1.04□□□□□ -2.24
HIF1A-201ENST00000323441 COX8AP10176 69 aa1.04□□□□□ -2.24
HIF1A-201ENST00000323441 PDE6GP18545 87 aa1.04□□□□□ -2.24
HIF1A-201ENST00000323441 VPS25Q9BRG1 176 aa1.04□□□□□ -2.24
HIF1A-201ENST00000323441 PRO0461Q9UI25 63 aa1.04□□□□□ -2.24
HIF1A-201ENST00000323441 NDUFS5O43920 106 aa1.03□□□□□ -2.24
HIF1A-201ENST00000323441 PP632Q6XCG6 107 aa1.03□□□□□ -2.24
HIF1A-201ENST00000323441 A0A1B0GV72 72 aa1.03□□□□□ -2.25
HIF1A-201ENST00000323441 HIST1H4AP62805 103 aaKnown RBP1.03□□□□□ -2.25
HIF1A-201ENST00000323441 JMJD7-PLA2G4BH0Y9G9 81 aa1.02□□□□□ -2.25
HIF1A-201ENST00000323441 COX6CP09669 75 aa1.02□□□□□ -2.25
HIF1A-201ENST00000323441 CEND1Q8N111 149 aa1.02□□□□□ -2.25
HIF1A-201ENST00000323441 HIST1H2BLQ99880 126 aa1.02□□□□□ -2.25
HIF1A-201ENST00000323441 TAX1BP3O14907 124 aa1.02□□□□□ -2.25
HIF1A-201ENST00000323441 MT1LQ93083 61 aa1.02□□□□□ -2.25
HIF1A-201ENST00000323441 NAA38Q9BRA0 125 aaKnown RBP1.02□□□□□ -2.25
HIF1A-201ENST00000323441 KRTAP4-3Q9BYR4 195 aa1.02□□□□□ -2.25
HIF1A-201ENST00000323441 PCP4L1A6NKN8 68 aa1.01□□□□□ -2.25
HIF1A-201ENST00000323441 NREPQ16612 68 aa1.01□□□□□ -2.25
HIF1A-201ENST00000323441 KRTAP12-4P60329 112 aa1.01□□□□□ -2.25
HIF1A-201ENST00000323441 HCG22E2RYF7 251 aa1.01□□□□□ -2.25
HIF1A-201ENST00000323441 KRTAP9-6A8MVA2 160 aa1□□□□□ -2.25
HIF1A-201ENST00000323441 CASC2Q6XLA1 102 aa1□□□□□ -2.25
HIF1A-201ENST00000323441 BAALC-AS2P0C853 105 aa1□□□□□ -2.25
HIF1A-201ENST00000323441 PRO0628Q9UI54 55 aa1□□□□□ -2.25
HIF1A-201ENST00000323441 NDUFC1O43677 76 aa1□□□□□ -2.25
HIF1A-201ENST00000323441 PSMB2P49721 201 aa1□□□□□ -2.25
HIF1A-201ENST00000323441 ADM2Q7Z4H4 148 aa1□□□□□ -2.25
HIF1A-201ENST00000323441 FXYD2P54710 66 aa0.99□□□□□ -2.25
HIF1A-201ENST00000323441 C20orf197Q8N268 126 aa0.99□□□□□ -2.25
HIF1A-201ENST00000323441 R4GN34 69 aa0.99□□□□□ -2.25
HIF1A-201ENST00000323441 TP53AIP1Q9HCN2 124 aa0.99□□□□□ -2.25
HIF1A-201ENST00000323441 M0R143 59 aa0.98□□□□□ -2.25
HIF1A-201ENST00000323441 A0A087WVE0 104 aa0.98□□□□□ -2.25
HIF1A-201ENST00000323441 BPY2O14599 106 aa0.98□□□□□ -2.25
HIF1A-201ENST00000323441 VAMP8Q9BV40 100 aa0.98□□□□□ -2.25
HIF1A-201ENST00000323441 CCDC179H3BU77 68 aa0.97□□□□□ -2.25
HIF1A-201ENST00000323441 S100A2P29034 98 aa0.97□□□□□ -2.25
HIF1A-201ENST00000323441 HSD52Q0P140 79 aa0.97□□□□□ -2.25
HIF1A-201ENST00000323441 CYP4F30PQ9H0H9 118 aa0.97□□□□□ -2.25
HIF1A-201ENST00000323441 C14orf132Q9NPU4 83 aa0.97□□□□□ -2.25
HIF1A-201ENST00000323441 M0QZ58 72 aa0.96□□□□□ -2.26
HIF1A-201ENST00000323441 ATXN8Q156A1 80 aa0.96□□□□□ -2.26
HIF1A-201ENST00000323441 K7ERJ3 54 aa0.96□□□□□ -2.26
HIF1A-201ENST00000323441 SCGB1C2P0DMR2 95 aa0.96□□□□□ -2.26
HIF1A-201ENST00000323441 SPATA45Q537H7 98 aa0.96□□□□□ -2.26
HIF1A-201ENST00000323441 SMIM20Q8N5G0 67 aa0.96□□□□□ -2.26
HIF1A-201ENST00000323441 KRTAP19-5Q3LI72 72 aa0.96□□□□□ -2.26
HIF1A-201ENST00000323441 COL5A1-AS1Q5SY13 56 aa0.96□□□□□ -2.26
HIF1A-201ENST00000323441 SYNE1Q8NF91 8797 aaKnown RBP0.95□□□□□ -2.26
HIF1A-201ENST00000323441 LOC101927531A0A1B0GV80 90 aa0.95□□□□□ -2.26
HIF1A-201ENST00000323441 K7EP34 96 aa0.95□□□□□ -2.26
HIF1A-201ENST00000323441 P0C880 135 aa0.95□□□□□ -2.26
HIF1A-201ENST00000323441 TRAV22A0A0B4J277 110 aa0.94□□□□□ -2.26
HIF1A-201ENST00000323441 A8MU10 97 aa0.94□□□□□ -2.26
HIF1A-201ENST00000323441 TSTD3H0UI37 97 aa0.94□□□□□ -2.26
HIF1A-201ENST00000323441 ACYP1P07311 99 aa0.94□□□□□ -2.26
HIF1A-201ENST00000323441 Q8N9L7 120 aa0.94□□□□□ -2.26
HIF1A-201ENST00000323441 MT-ATP8P03928 68 aa0.94□□□□□ -2.26
HIF1A-201ENST00000323441 A0A0A0MQY5 61 aa0.93□□□□□ -2.26
HIF1A-201ENST00000323441 H3BT86 120 aa0.92□□□□□ -2.26
HIF1A-201ENST00000323441 K7ERU9 68 aa0.92□□□□□ -2.26
HIF1A-201ENST00000323441 LINC01554Q52M75 96 aa0.92□□□□□ -2.26
HIF1A-201ENST00000323441 NDUFAF8A1L188 74 aa0.92□□□□□ -2.26
HIF1A-201ENST00000323441 V9GYY9 64 aa0.92□□□□□ -2.26
HIF1A-201ENST00000323441 ATOX1O00244 68 aa0.91□□□□□ -2.26
HIF1A-201ENST00000323441 F8W1H4 67 aa0.91□□□□□ -2.26
HIF1A-201ENST00000323441 UBL5Q9BZL1 73 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms