RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 TNXBP22105 4242 aa5.71□□□□□ -1.5
KARS-202ENST00000319410 LINC00304Q8N9R0 145 aa5.71□□□□□ -1.5
KARS-202ENST00000319410 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
KARS-202ENST00000319410 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
KARS-202ENST00000319410 C8orf17Q9NRJ1 99 aa5.69□□□□□ -1.5
KARS-202ENST00000319410 KRTAP13-1Q8IUC0 172 aa5.69□□□□□ -1.5
KARS-202ENST00000319410 Q5W150 140 aa5.68□□□□□ -1.5
KARS-202ENST00000319410 MRPL34Q9BQ48 92 aaKnown RBP5.67□□□□□ -1.5
KARS-202ENST00000319410 IGLV9-49A0A0B4J1Y8 123 aa5.65□□□□□ -1.51
KARS-202ENST00000319410 LRP2P98164 4655 aa5.63□□□□□ -1.51
KARS-202ENST00000319410 KRTAP10-8P60410 259 aa5.63□□□□□ -1.51
KARS-202ENST00000319410 PRLHP81277 87 aa5.62□□□□□ -1.51
KARS-202ENST00000319410 KRTAP1-4P0C5Y4 121 aa5.62□□□□□ -1.51
KARS-202ENST00000319410 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
KARS-202ENST00000319410 SSBP3-AS1Q7Z2R9 100 aa5.62□□□□□ -1.51
KARS-202ENST00000319410 RNF213Q63HN8 5207 aa5.61□□□□□ -1.51
KARS-202ENST00000319410 A0A1B0GVX0 72 aa5.6□□□□□ -1.51
KARS-202ENST00000319410 SPRR1BP22528 89 aa5.58□□□□□ -1.52
KARS-202ENST00000319410 KRTAP13-3Q3SY46 172 aa5.57□□□□□ -1.52
KARS-202ENST00000319410 Q96NJ1 140 aa5.56□□□□□ -1.52
KARS-202ENST00000319410 LPAP08519 4548 aa5.55□□□□□ -1.52
KARS-202ENST00000319410 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
KARS-202ENST00000319410 H0YAA0 97 aa5.52□□□□□ -1.53
KARS-202ENST00000319410 TYMSOSQ8TAI1 123 aa5.52□□□□□ -1.53
KARS-202ENST00000319410 KRTAP13-2Q52LG2 175 aa5.51□□□□□ -1.53
KARS-202ENST00000319410 ANAPC11Q9NYG5 84 aa5.5□□□□□ -1.53
KARS-202ENST00000319410 A0A1B0GU33 70 aa5.44□□□□□ -1.54
KARS-202ENST00000319410 IGKV2-30P06310 120 aa5.44□□□□□ -1.54
KARS-202ENST00000319410 LCE2BO14633 110 aa5.44□□□□□ -1.54
KARS-202ENST00000319410 RPS29P62273 56 aaKnown RBP5.43□□□□□ -1.54
KARS-202ENST00000319410 SPINK1P00995 79 aa5.42□□□□□ -1.54
KARS-202ENST00000319410 MUC2Q02817 5179 aa5.41□□□□□ -1.54
KARS-202ENST00000319410 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
KARS-202ENST00000319410 IGKV2D-30A0A075B6S6 120 aa5.38□□□□□ -1.55
KARS-202ENST00000319410 H1FX-AS1Q4G0G2 97 aa5.37□□□□□ -1.55
KARS-202ENST00000319410 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
KARS-202ENST00000319410 CAMK2N1Q7Z7J9 78 aa5.29□□□□□ -1.56
KARS-202ENST00000319410 RPL37P61927 97 aaKnown RBP5.25□□□□□ -1.57
KARS-202ENST00000319410 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
KARS-202ENST00000319410 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
KARS-202ENST00000319410 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
KARS-202ENST00000319410 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
KARS-202ENST00000319410 MUC17Q685J3 4493 aa5.18□□□□□ -1.58
KARS-202ENST00000319410 XP32Q5T750 250 aa5.15□□□□□ -1.59
KARS-202ENST00000319410 KRTAP4-1Q9BYQ7 146 aa5.12□□□□□ -1.59
KARS-202ENST00000319410 LORP23490 312 aaPredicted RBP5.12□□□□□ -1.59
KARS-202ENST00000319410 C9orf92A6NGG3 77 aa5.09□□□□□ -1.59
KARS-202ENST00000319410 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
KARS-202ENST00000319410 PLAC4Q8WY50 150 aa5.05□□□□□ -1.6
KARS-202ENST00000319410 A0A0D9SG42 100 aa4.99□□□□□ -1.61
KARS-202ENST00000319410 S4R3F8 94 aa4.97□□□□□ -1.61
KARS-202ENST00000319410 PRO2289Q9P1D8 64 aa4.96□□□□□ -1.62
KARS-202ENST00000319410 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
KARS-202ENST00000319410 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
KARS-202ENST00000319410 KRTAP3-1Q9BYR8 98 aa4.92□□□□□ -1.62
KARS-202ENST00000319410 MT1HP80294 61 aa4.91□□□□□ -1.62
KARS-202ENST00000319410 KRTAP13-4Q3LI77 160 aa4.91□□□□□ -1.62
KARS-202ENST00000319410 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
KARS-202ENST00000319410 KRTAP10-6P60371 365 aaPredicted RBP4.89□□□□□ -1.63
KARS-202ENST00000319410 KRTAP12-2P59991 146 aa4.85□□□□□ -1.63
KARS-202ENST00000319410 M0R2T5 61 aa4.83□□□□□ -1.64
KARS-202ENST00000319410 FLGP20930 4061 aaPredicted RBP4.82□□□□□ -1.64
KARS-202ENST00000319410 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
KARS-202ENST00000319410 R4GN34 69 aa4.77□□□□□ -1.65
KARS-202ENST00000319410 CRCT1Q9UGL9 99 aa4.77□□□□□ -1.65
KARS-202ENST00000319410 INE1O15225 51 aa4.73□□□□□ -1.65
KARS-202ENST00000319410 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
KARS-202ENST00000319410 M0QZ58 72 aa4.65□□□□□ -1.67
KARS-202ENST00000319410 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
KARS-202ENST00000319410 USH2AO75445 5202 aa4.6□□□□□ -1.67
KARS-202ENST00000319410 MT2AP02795 61 aa4.57□□□□□ -1.68
KARS-202ENST00000319410 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
KARS-202ENST00000319410 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
KARS-202ENST00000319410 MT1FP04733 61 aa4.55□□□□□ -1.68
KARS-202ENST00000319410 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
KARS-202ENST00000319410 KRTAP10-10P60014 251 aa4.52□□□□□ -1.69
KARS-202ENST00000319410 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
KARS-202ENST00000319410 FCGBPQ9Y6R7 5405 aaPredicted RBP4.46□□□□□ -1.7
KARS-202ENST00000319410 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
KARS-202ENST00000319410 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
KARS-202ENST00000319410 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.7
KARS-202ENST00000319410 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
KARS-202ENST00000319410 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
KARS-202ENST00000319410 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
KARS-202ENST00000319410 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
KARS-202ENST00000319410 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
KARS-202ENST00000319410 TNP1P09430 55 aa4.16□□□□□ -1.74
KARS-202ENST00000319410 MT1BP07438 61 aa4.15□□□□□ -1.75
KARS-202ENST00000319410 KRTAP6-3Q3LI67 103 aa4.11□□□□□ -1.75
KARS-202ENST00000319410 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
KARS-202ENST00000319410 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
KARS-202ENST00000319410 KRTAP10-5P60370 271 aa4.04□□□□□ -1.76
KARS-202ENST00000319410 NEBP20929 6669 aa4.01□□□□□ -1.77
KARS-202ENST00000319410 KMT2DO14686 5537 aa3.96□□□□□ -1.78
KARS-202ENST00000319410 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
KARS-202ENST00000319410 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
KARS-202ENST00000319410 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
KARS-202ENST00000319410 MT1XP80297 61 aa3.91□□□□□ -1.78
KARS-202ENST00000319410 KRTAP5-9P26371 169 aa3.9□□□□□ -1.78
KARS-202ENST00000319410 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms